Hippoglossus hippoglossus (Atlantic halibut): 117760204
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Entry
117760204 CDS
T07778
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117760204 (hps3)
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
117760204 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
117760204
NCBI-ProteinID:
XP_034438939
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Position
4:complement(24177669..24191584)
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AA seq
1082 aa
AA seq
DB search
MNSPRSRANMVHVYNCHPYASQQIVQVEQEPGLVCCGGGALFVVASGGCKVEAYSVEQEG
CPLICRFSTMGTVRSIQHSKTGDYLVTIEEKNSATYLRAYTNWRYQAEGKARVGVRLLGH
LLRGASVRGGVQMEIIEIPLSEHPVAVACCSVTGDLLVGCEKTLVLFTLRRPNQQSLQSQ
SPWPNTQQSSSQSQGQTSSSNQNVSILDFERSVIVHLPKMSLKQVALCGGYVAVQAELEV
LVLKLEASSDPQTPDDSSDTNTCDDPLEDQSDLLLIPRQQELLGDRAKDCDIPVSIEKTG
LEDKGQYTLSYVLFRRFTPEFFQGCSVEETQLHSLQLYPLYTSSQSASTEEPACVFCFFS
LPNAGYLYSLKGGVELLSAYQYPEKVLEAVLTDHLLHVITKNALQCFTVRCAAVAARMED
PYIDTTMKACPPCSLEVCALRMQLFIGLRSVCVYGRHVILLSAADMETPDESERSTQRRE
LKEHTTLTGIFLAVGIDPATTPALESFLSRPFLSRKWTISSPKETSAAGHGWNLYVVDTV
SPLVLYREMVEYSRHYSETNPQAQSLRHLLSEAHLLLCASSLQQSSEGNHTVSLQKDADK
QTEGQTEGQTEGQTERQEVQEALRQNCAQLGDCYSRASQKDCHQALPYYRMSGLSVTEVL
VRNRPLPSSPHSYGLGFLFYLKHFLFEETEQSLSQESADEVIDIFSQSDPSEIISVCASP
SMTNISPARTLRIFQHLEATAGVSVPLTITMATMMLRLDDLPQYTQLMDRHPEMLLVYGF
IDEPRLLLHGGGGGPHTRVRPTSLTRQLSKSQPGLLVAGMVALHENNKAQLEQADHIFKE
LGCENCLLVDFWEATLMASSQEAVIQELLFRLASVYIERLTHTNSGAHSSLPRTRPQRRP
LKSADDLINSSSHYGSLYPWLTVLCPAHTTNFQHQEALHKLQSLLCGPSMSIGSVLPLLE
RLSEETLWGFSLHLLCATRRGQFDSSIEKLLDRCPQAIIAFANHHLQDRHMALWWQKLLP
ELCDRTRAAADNSILLAALKETLVVVATETSPAQFLELIPDDGTASYFLPHLLRCSQRHL
LA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaactctccaagaagcagggccaacatggtgcacgtgtacaactgtcatccctacgcc
tcgcagcagatagtgcaggtggagcaggagcccgggttggtctgctgtggaggtggagct
ctgttcgtggtggcttctggaggatgcaaggtggaggcgtacagtgtggagcaggagggc
tgcccgctcatctgccgcttctccaccatgggcacagtgaggagcatccagcacagcaag
acaggggactacctggtgaccattgaggagaagaacagcgctacctatctgagagcctac
accaactggagataccaggccgaggggaaagcccgtgtcggggtgcgtttgctgggccac
ctgctgcggggggcgtctgtgcggggcggagtgcagatggagatcattgagatccccctg
tcggagcatcctgtggctgtggcgtgttgctcggtcaccggggacctactggtcggctgc
gagaaaaccctggttctgttcacgttgaggagaccgaaccagcagagcctgcagagtcag
agtccctggccgaacactcagcagagctccagtcagagtcaaggtcaaacctcaagctca
aaccaaaatgtttccatcctggactttgaacgctccgtcatcgtgcaccttccgaaaatg
tcccttaaacaggtggcgctgtgtggaggatatgttgcagtgcaggcggagctggaggtg
ctcgtactgaaactggaagcatcttctgatcctcaaaccccggacgactcctcggacaca
aatacatgtgacgatcctctggaggaccagtccgacctcctgctcattccgaggcagcag
gagttgctgggcgatcgagctaaagactgtgacatccctgtcagcattgagaagacgggg
ctggaggacaaaggacagtacacgctgtcatatgttcttttcaggcgttttactccagag
tttttccagggctgcagtgtggaggagacgcagctccactccctgcagctctacccgctt
tacaccagtagccagtcagcgtccacagaggaaccagcgtgtgtgttctgcttcttctcg
ctccccaacgccggctacctgtacagtttgaagggcggagtcgagctgctctcagcctat
cagtatccagagaaggtcctggaggcggtgctaacagaccacctgctgcatgtcattacc
aagaatgcgttgcagtgtttcacagtgcgctgtgcggccgtagcagccaggatggaagac
ccctacatcgataccaccatgaaggcctgtcccccctgcagcctggaggtgtgcgccctc
cggatgcagctgtttatcggcctgcgctcagtgtgtgtctacggccgccacgtcatcctg
ctctctgccgccgacatggagacgccagacgagagcgaacgcagcacacagcgccgcgag
ttgaaagaacacaccacgctgactggtattttcctggcggtgggaatcgaccccgcaacc
acgccggctctggagagctttctgtcacgccccttcctgagcaggaagtggacgatctcc
tctcctaaagaaaccagcgcagccggacatggatggaacctgtacgtggtcgacaccgtc
tcgcccctcgtgctctaccgagagatggtggagtacagccgacactattcggagaccaac
ccacaggcccaaagcctccgacacctcctcagtgaggctcacctcctcctctgcgcctcc
tcactgcagcagagcagcgagggcaaccacacggtgtctctgcagaaagatgcagacaaa
cagacggagggacagacagagggacagacggagggacagacagagagacaagaagtgcag
gaggctctgaggcagaactgtgcacagctgggagactgttacagcagggcgagccagaag
gactgtcaccaggctctgccgtactacaggatgtccggactgtcagtcacagaggtcctc
gtcaggaaccgcccacttcccagcagccctcactcctatggcctcggcttcctgttttac
ctgaaacatttcctcttcgaggaaacggagcagagcctcagtcaggaatcagccgatgag
gtcatagacattttcagccaatcagatccctcagagatcatcagcgtgtgtgccagcccg
tccatgacaaacatcagtcccgcccggacgctgcgaattttccaacatctggaggccacg
gctggcgtgtcggtcccactgaccatcaccatggcaaccatgatgctgcgtctcgacgac
ctgccacagtacacacagctgatggacagacatcccgagatgctgctggtgtacggtttc
atcgacgagccgaggctgctgcttcacggtggaggcggcggcccgcacacacgcgttcgt
cccacatcgctgactcgccagctgtcaaagtcccagccaggactgctggtagccggcatg
gtggctctgcatgagaacaacaaggctcagctggaacaggctgatcacatattcaaggag
ctgggctgtgagaattgcttactggtggatttctgggaggcgacgctcatggcctcctca
caggaagctgtcatccaggagcttctgttcagactggcttctgtctacatcgagcggctg
acgcacacaaactcaggcgcacactccagccttcctcgcactcgtccacaacgcaggccg
ctgaagagcgctgatgatctgatcaactccagctcccattacggctccttgtacccgtgg
ctcactgttctgtgtccagctcacactaccaacttccagcaccaggaggcgttacacaaa
ctgcagtctctcctgtgtggtccgtccatgtccattggttctgtcctgcctctgttggag
cgtctgtcggaagaaaccctgtggggcttcagcctgcacctcctctgcgcgaccagaagg
gggcagtttgacagcagcatagagaagttgctggaccgatgtcctcaggccatcatcgcc
ttcgctaaccaccatctgcaggacagacacatggcgttgtggtggcagaagctgctcccg
gagctgtgtgatcgcacgagagctgcagcggacaacagcatcctactggctgctctcaaa
gaaacactggtggtggttgccacggagaccagcccagcacagttcctggaactcatacct
gacgacggcacggcatcgtacttcctgcctcacctgttgagatgtagccagagacacctg
cttgcctga
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