Hippoglossus hippoglossus (Atlantic halibut): 117760275
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Entry
117760275 CDS
T07778
Symbol
si:ch73-61d6.3
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03272
Virion - Hepatitis viruses
hhip04514
Cell adhesion molecules
hhip04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117760275 (si:ch73-61d6.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117760275 (si:ch73-61d6.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117760275 (si:ch73-61d6.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117760275 (si:ch73-61d6.3)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117760275 (si:ch73-61d6.3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
117760275
NCBI-ProteinID:
XP_034439064
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All DBs
Position
4:complement(20397830..20415414)
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AA seq
551 aa
AA seq
DB search
MFNKQQYESPPVYSPPFTPASNNGFGPAASFHGPQSDYNAYPPPPGSYYVEDKPQHFYKW
LSPPGIIKAMMITVIVLCVAIFACVASTLMWDMQYGYGAGMGYGGGGYGGGGYGGSYGGG
YGGGSYGSGYGGYGGYGNGQGSYISPYSAKAAMIALAAINFIGALVFFIASFSKSNMVHS
RKFFLALLVTSIIMAVLQGIINIVYIVGVNPMAQGSSSMMYNPMLMMCQNLYQSGYSQMG
GGGGGFPIYNQYLYHYCFVDPQEGVAMVCGFLVVIALGVAAFFAHKTRGKIWRYGKPNIY
WKEPLVGGKASEGRDVEDWVNNVEESRSVQDAPTLLVSEKGGGLLNASVNSVISYPPAKV
DSSSYNGDTYNNNEYSDRTTSRPSEVFSHGGGTSSSPSEEMSSVRKPSANRGKRRRRNPE
LDESQYETEYTTGGETGNELDEEEWESSYPVITSDVQRHDYKREFDSDLKDYKRLCAEMD
DINDQMNKLSRQLDTLDDTSAKYQVAAEEYNLLKDLKQTPDYRSRKKDCRRLRYKLFHIK
RMVKNYDKTHP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagcagcagtacgagagtccgcctgtttacagtcctcccttcacccctgca
tccaacaacggctttggccctgcagccagcttccatggccctcagagcgactacaatgcg
tacccacctccgccgggatcgtactacgtcgaggacaagccacagcacttctacaaatgg
ctgtcgcctcccggcatcatcaaggccatgatgattacggtgattgtgctgtgtgtggcg
atatttgcctgcgtggcttccactctcatgtgggacatgcagtatggatatggtgctgga
atgggctacggcggtggcggctacggcggcggcggctacggcggcagctacggtggcggc
tacggcggcggcagctacggttcaggatatggaggatatggaggttacggaaacggccaa
ggttcctacatctcgccttactcggccaaagccgccatgatcgccttggcagccattaac
ttcattggagcgctggtgttcttcattgccagcttctctaaatccaacatggtccacagc
aggaagttcttcctggccctcctggtaaccagcatcatcatggctgttctgcagggcatc
ataaacattgtctacatcgtcggagtgaaccccatggcccagggctcctccagtatgatg
tacaatccaatgctcatgatgtgccagaacctgtaccagagcggctactcacagatggga
ggaggcggcggaggtttccccatttacaaccagtacctctaccactactgctttgtggac
ccacaggagggagttgccatggtgtgtggattcctggtcgtaatcgctttgggtgttgca
gctttctttgcacacaaaaccagggggaagatctggcgctacgggaaaccaaacatctac
tggaaggagcctctggttggggggaaggcctccgagggcagagatgtggaggattgggtg
aacaatgtggaggaaagccgcagtgttcaggacgccccgaccctgctggtgtcagagaag
ggaggcgggctcctcaacgcctcggtgaacagtgtcatctcctaccccccggccaaggtg
gacagcagctcctacaatggggacacatacaacaacaacgagtactcggacaggaccaca
agccgaccctcagaggtcttctcccacgggggagggaccagctccagcccttcagaggag
atgagcagtgtccgcaaaccctccgccaaccggggcaagagacgccgacgtaacccagag
ctggacgagtctcagtacgagacagagtacaccacgggaggagagacgggcaatgagctt
gatgaagaagagtgggagagctcttacccggtgataacatctgatgtgcagcgtcacgac
tacaagagggagtttgattccgaccttaaggactacaagcgcctctgtgctgagatggat
gacatcaatgatcagatgaacaaactcagccggcagttggacacactggacgacacctcg
gccaaataccaggttgcagccgaggaatataatcttcttaaggatctgaagcagacacca
gactaccggtctaggaagaaggactgtcgcaggctgagatacaaactgttccacatcaag
cgcatggtgaagaactacgacaagacccacccatga
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