Hippoglossus hippoglossus (Atlantic halibut): 117760358
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Entry
117760358 CDS
T07778
Symbol
myo1f
Name
(RefSeq) unconventional myosin-If
KO
K10356
myosin I
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117760358 (myo1f)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117760358 (myo1f)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117760358 (myo1f)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117760358 (myo1f)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117760358 (myo1f)
04147 Exosome [BR:
hhip04147
]
117760358 (myo1f)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117760358 (myo1f)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Phagocytosis
Others
117760358 (myo1f)
Others
Actin-binding proteins
Myosins
117760358 (myo1f)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117760358 (myo1f)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117760358 (myo1f)
Exosome [BR:
hhip04147
]
Exosomal proteins
Proteins found in most exosomes
117760358 (myo1f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_1
SH3_9
SH3_2
nSTAND3
NPHP3_N
IQ
AAA_16
ABC_tran
IQCJ-SCHIP1
RapZ-like_N
AAA_22
Microtub_bd
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
117760358
NCBI-ProteinID:
XP_034439211
LinkDB
All DBs
Position
4:20572259..20589346
Genome browser
AA seq
1089 aa
AA seq
DB search
MAKYHWQSQNVKQSGVDDMVLLSKITEDAIVDNLKKRYMDDYIFTYIGPVLISVNPFKQM
PYFTDREIELYQGAAQYENPPHIYALTDNSYRNMMIDGENQCVIISGESGAGKTVAAKYI
MGYISKVSGGGTKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPD
GGKISNFLLEKSRVVSQNENERNFHIYYQLIEGTNAQQKEGLGIMTPDYYYYLNQSGTYK
VDGTNDCKDFQETMEAMQVIGIPGDIQAQALQIIAGILHLGNISFIEAGNYGKVESTDLL
AFPAYLLGIDSSRLQDKLTGRKMDSKWGGKEESINVTLNQEQATYTRDALAKALYARLFD
YLVEAINKAIQKPHEEFSIGVLDIYGFEIFKRNGFEQFCINFVNEKLQQIFIELTLKAEQ
EEYVQEGIKWTPIDYFNNKIVCDLIENKLNPPGIMSVLDDVCATMHAKGEGADSTLLQKL
SAAVGTHEHFNNWNSGFVIHHYAGKVSYDIMGFCERNRDVLFPDLIELMQSSEYDFIRSL
FPENLSTDKKSRPTTASSKIKKQANDLVKTLMKCTPHYIRCIKPNETKRPKDWEESRARH
QVEYLGLRENIRVRRAGYAYRRAFNKFLTRYAILTSETWPGWRGPEQQGVLHLLRSVNMD
NDQYQMGRTKVFVKNPESLFLLEEMRERKFDTFARIIQKAWRRFISRKKYEQMREEASDI
LYNSKERRKNSINRNFVGDYLGLEQRPELRQFLAKRERVDFADSVNKFDRRFKSIKRDLI
LTPKGIYLIGREKVKKGPEKGHIKEVLKRKMEFESISGVSLSTRQDDYFILHEAQYDSLL
ESNFKTEFLSLLSKRYEDVAKRKLTISFTDKLEFRVKKEGWGGGGSRMVIFQRGQGDLTQ
LKPGGKTLTITVGDGLPKSSKPTRKSFPQSHGGGRNDISSRAQQNGAAKFSRAPQPQPSE
THYSTAHKQGRPPSAALPKLGSQRAPKAPAHSQHSQGNMDFLNVPDQGMSGKQRRRSINH
RPPPAPKHQPRPQGPRCRALYQYVGQDTDEISFEVNDVFDLVKEDPSGWWRGRIRGSEGL
FPGNYVEKI
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtatcactggcagagtcagaatgtgaagcagagcggcgtggacgacatggtc
ctgttgtccaagatcacagaggacgccatcgtggacaacctgaagaagagatacatggac
gactacatcttcacttatatcggccccgtgttgatctcagtgaaccccttcaagcagatg
ccctatttcaccgacagagaaatcgaactttatcaaggagccgcccagtatgagaatccc
cctcacatctacgccttgaccgataactcgtacagaaacatgatgatcgatggagaaaac
cagtgtgtcatcatcagtggtgagagcggtgccggaaagacagtggctgccaaatacatc
atgggctacatttccaaagtatctggaggaggaaccaaagtgcagcatgtcaaagacatc
atcctgcagtccaatcctttgctggaagccttcggtaacgccaagactgtacgcaacaac
aactccagtcgttttgggaaatactttgagattcagttcagcagaggaggagagccagat
ggaggcaaaatctccaacttcctgctggagaagtcgagggtggtgagccagaacgagaac
gagaggaacttccacatctactatcagctgatagagggcaccaacgctcagcagaaagag
ggcctgggcatcatgaccccagactactactactacctcaaccagtctgggacctacaag
gtggatgggaccaatgattgcaaagacttccaagagacgatggaggccatgcaggtgatc
gggatcccaggcgacatccaggctcaggcgctgcagatcatcgcaggcatcctccacctg
ggaaacatcagcttcatagaggcaggcaactacggcaaggtggagagcacggatctgctc
gccttccccgcctacctgctgggcatcgactccagccgcctgcaggacaagctgaccggc
aggaagatggactcaaagtggggagggaaggaagagtccatcaacgtgacactgaaccag
gagcaggccacctacacacgagacgccctggccaaggccctctacgcacgactcttcgac
tacctggttgaggccataaataaagccattcagaaaccacatgaagaattcagtattggc
gttctcgacatttatggctttgagatattcaagagaaacggctttgagcagttctgcatc
aactttgtgaacgaaaaactgcagcaaatctttattgaactcactctgaaggctgagcag
gaagagtatgttcaggagggcatcaagtggacacctatcgattacttcaacaacaagatt
gtgtgtgacctcattgaaaataaactgaaccctccaggtataatgagtgtgctggatgat
gtgtgtgccactatgcatgccaaaggagagggtgcagacagcactctgctgcagaaactg
tcggccgctgtggggacgcatgaacatttcaacaactggaactctggcttcgtcattcat
cactacgccggcaaggtgtcttatgatatcatgggcttctgtgagagaaaccgggatgtg
cttttccctgacctcatagagctcatgcagagcagcgagtatgacttcatccgtagcttg
ttccctgaaaacctaagcactgataagaaaagcaggccgaccacagccagctccaagatc
aagaaacaagccaatgacttggtgaaaaccctgatgaagtgcactccgcactacatccgc
tgtatcaaacccaatgagacaaaaagacccaaagactgggaggagagcagggcgcgacat
caggttgaatacctgggactgcgggaaaacatacgagtgagaagagctggatacgcatac
cgcagggccttcaacaagtttctgacgaggtatgccattctgacatcggagacatggccg
ggctggaggggtccggagcagcagggggtccttcacctcctccgctctgtcaacatggac
aatgaccagtatcagatgggacgcaccaaagtcttcgtcaagaaccctgaatcgctgttt
cttctggaggagatgagggagaggaagtttgacacgttcgccaggatcatccagaaagcc
tggagacgcttcatctccaggaagaagtatgaacaaatgagagaggaggcctcggacatc
ctgtacaactccaaggagcggaggaagaacagcatcaacaggaacttcgtcggcgactac
ctcggcctggagcagaggcccgagctgcggcagtttctggccaagagggagcgcgtcgac
ttcgctgattcagtcaataagtttgatcgcaggttcaagtccatcaagagagatttgatc
ttgaccccgaagggcatctatctgattggccgagagaaggtgaagaaagggcccgagaag
gggcacataaaggaggtgctgaaacggaaaatggagtttgaaagcatcagcggcgtctcc
ctcagtacgagacaggatgattacttcatcctgcacgaggctcagtacgacagcctgctg
gagtccaacttcaagacagagttcctcagcctgctctccaaacgctacgaggacgtggcc
aagagaaaactgaccatctccttcactgacaaattggagttcagggtgaagaaggagggc
tggggtggaggaggctccaggatggtcatcttccagagggggcaaggagacctaacccag
ctcaaacctggagggaagaccctcacaatcacagtaggagacggtctacccaagtcctcc
aagccgaccaggaagagtttcccacagtctcatggtggagggagaaatgatatatccagc
agagctcaacagaatggagcagccaagttttccagagctcctcagcctcaaccgtcagaa
acccattattccaccgcgcacaaacagggccggccacccagcgccgctctgcccaaactg
ggttcccagagggccccaaaagccccggcccacagccagcacagccaaggcaacatggac
ttcctgaatgtgcctgaccagggcatgtcagggaagcagaggagaaggagcatcaatcac
cgacctcctcctgctcccaaacatcagcctcgaccccaggggcctcgctgccgggcgctg
tatcagtatgtcggccaggacacggacgagatcagcttcgaggtcaacgacgtcttcgac
ctggtcaaagaagatccatcgggatggtggaggggcaggattcgaggaagtgaaggcctc
tttcctggcaactatgtcgaaaagatttga
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