Hippoglossus hippoglossus (Atlantic halibut): 117760422
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Entry
117760422 CDS
T07778
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117760422 (rnf13)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117760422 (rnf13)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117760422 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_4
PHDvar_NSD
DUF7027
RINGv
PHD
Neur_chan_memb
zf-RING-like
CxC1
FeoB_associated
zf-C3H2C3
Hemotin
Motif
Other DBs
NCBI-GeneID:
117760422
NCBI-ProteinID:
XP_034439331
LinkDB
All DBs
Position
4:16910316..16950476
Genome browser
AA seq
382 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYSFENKTENFDDLPARFGYRLP
SDGLKGFLIGARPENACEPIEPPPRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKAAIV
HNVDSNDLISMGSNDLDVMKQIDIPSVFVGEDAANSLKESYTYDKGGHVVLMSDFSLPLE
YYLIPFLIIVGICLILIIVFMITKFVQDRHRARRSRLRKDQLKKLPIHKFKKGDSYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSEEGESGP
DENEEVSESTPLLRSLASTSAHSFGTMSGASRSEQDQESSEYEDDELDSSDSDEEVTLET
VVVQMQQPCAEGLDHDHDLPRA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgctatccctgggaatgttaatgctgtcggcgacgcagatttacaccatcttcacc
gtgcagctcttcgccttcctcaacctgctgcccgtggaggctgacatttctgcatactcc
tttgaaaataaaacggagaacttcgatgacctgcctgcacgcttcggttatcgtctcccc
agcgatggactgaagggcttcctgattggtgcacggccagaaaatgcgtgcgagcccatc
gagccgcctccgagggacaacttgacgggcgccttcattgtcctcatcaaacggtttgac
tgcaactttgacataaaggtcctgaacgcccagaaagcgggatacaaggcggccattgtt
cacaatgtggactccaatgacttaatcagcatgggatccaacgatctggatgttatgaag
cagatcgatattccctctgtgtttgttggtgaagacgcggccaactctctgaaagaaagc
tacacatatgacaaggggggacacgttgtcctcatgtcagacttcagcctgccactagaa
tattacctgatccccttcctcatcatcgtgggaatctgcctcatcctcatcattgttttc
atgattaccaagttcgtccaggatcgacacagagctcggaggagccgcctgcgcaaagat
cagctcaagaaactcccaattcacaagttcaagaaaggggacagctatgacgtctgtgcc
atctgtctggacgaatacgaagaaggagacaaactccgagtcctgccatgttctcatgcc
taccacagtaagtgtgtggacccctggctgaccaaaaccaagaagacgtgtccggtgtgt
aagcagaaggtcgtcccctcgcagggcgactccgactcagaggagggggagagcggcccc
gatgagaacgaggaggtgtccgagagcaccccactgctgcgctccctggcctccaccagc
gcccactccttcgggaccatgtcgggagcgtcgcgctcggagcaggaccaggagtcctcc
gagtacgaggacgacgagctggacagcagcgacagcgatgaggaagtcaccctggagacc
gtggtggtgcagatgcagcagccctgcgccgaaggcctcgaccacgaccacgacttgccc
cgagcttga
DBGET
integrated database retrieval system
