Hippoglossus hippoglossus (Atlantic halibut): 117760601
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Entry
117760601 CDS
T07778
Symbol
patj
Name
(RefSeq) inaD-like protein
KO
K06092
InaD-like protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117760601 (patj)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117760601
NCBI-ProteinID:
XP_034439616
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Position
4:27937641..27990125
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AA seq
1231 aa
AA seq
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VEVEEEEERVNTARRREEEEEEDDEGELALWSPDVQMLELQKERDKGLGFSILDYQDPLD
PGRCVMVIRSLVPGGSAERHGGLLPGDQLVSVNHIQLDLLTLAQSVEVLKSIPSGTVRLG
IRKPLVVEATERSRKDDNTTSLSNTQLPVPKGFGDGSILPEDLRREDEEEEEEPELILDG
GLPRYATSCMTSVLLPVEEGREMAVDEEEMKTTEEREEEKMGSLSRKPPPSWEEWRLTSS
GRGRPEESWSQKQDDEQTSERESIVSEGNQILDFRDSEAESELTLTDTDTESVRMIDMGR
RKRRTQGGATLPIRGGHRNLPEREEGEGEETPAFSHWGPPRRVEVWAEEDESLGLSIVGG
HHVIKRLRNGEELKGIFIKQVLPKSPAAKTLCLKTGDKILEVSGVDLRAASHEEAVSAIK
SAPSPIVFIVQSLCATPRPVSLTAPSYIKHKGKTMDSLKTTPPLRQPPPYTAPSQSENEL
NSDLEQAKERWCERYGDLQGELLCVEVEKERQGLGLSLAGNRDRSRLSIFVVGLSPGGAA
ARDGRIRVGDELLEINNQILYGRSHQNASAIIKSAGSKVKLILLRNEDAINQMAVPPFPP
PPPPPVLSLECVSPAAPGVPAPSDGPCPPDSLVLHPPPPSSSSSSSSETQVSLCGEAEVV
PVTDPSPPDKTNDEAEHNRNRSSVSAPQSLSEADALRKRQKESPVDELQAPRALLEQQSC
RSYSSSSKQTAAAPLISPDLQTVNRDPSCCAVVPGQEMMLEICKGRSGLGLSIVGGRDTQ
LDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRGASHEEAIAALRQTPAKVCLTVLR
DEAQYRDEDNLDMFKVELQKRSGRGLGLSIVGKRSGSGVFISEVVRGGVAQLDGRLMQGD
QITSVNGDDTRHASQETVAAILKCARGPVLLELGRLKAASWISSRRISQGSQMSHVSGAS
SGVVAPPLTQPPASSDPPASNPPAVTSSVTLLLNNNVTSSSDITSSSDITSSSANNTGPR
TVTVTRPPPPQGVSDSLGVSIAGGKGSPLGDIPIFIAMIQANGVAAKTHQLKVGDRIVSI
NSQSVEGLSHSEVVTMLKNSYGGINLQVVADTNISAIATQVESLSGGFSLTDNTDTHTAE
PEGPRPRSISLEKGSEGLGFSIVGGFGSPHGDLPIYVKTVFSKGAAAVDGRLKRGDQILS
VNGESLQGATHEQAVAILKKQRGSVTLDILS
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
gtggaggtggaggaggaggaggagagagtcaacacagccaggaggagggaggaggaggag
gaggaggatgatgaaggggagctggctctgtggtcaccagacgttcagatgttggagctg
cagaaggagcgagacaaaggcctcggcttcagtatcctcgactaccaggacccgttagat
cctggtcgctgtgtgatggtgattcgctctttggttcctggcgggtcagctgagcgtcac
ggtggcctacttcccggagaccagctagtttcagtcaaccacatccaactggacctgctc
accttggcccagtctgtggaggtcttaaagtctatcccatctggcactgtccgcctgggt
atccggaagcctctggtggtggaggcgacagagaggagcagaaaggacgacaacaccacg
tctctcagcaacacgcagctgcctgttccaaagggcttcggtgatggctccatcctgcct
gaagaccttcgacgggaagatgaagaggaggaagaggagccagagcttatcctggatgga
ggtctgcctcgctacgccacctcctgcatgacctctgtcctcctgcctgtagaagagggt
agggagatggctgtggacgaggaggagatgaagacgacagaagagagagaagaggagaag
atgggctctctctccaggaaacctcccccgtcatgggaggagtggaggctcacctcctcc
ggccgaggtcgaccagaggagagctggagtcagaagcaggatgacgagcagacgtcagag
cgagaaagtatcgtgtctgaaggaaaccagatcctggacttcagagacagtgaagcagag
tctgagctcactctgacagacaccgacacagagtctgtcaggatgattgacatggggagg
aggaagaggcggacccagggaggagccactctaccaatcagaggaggccacaggaatctt
cctgaaagagaggagggggagggagaggaaactccggccttcagtcactggggacccccc
cgcagggtggaggtgtgggcggaggaggatgagtctctgggcctgagcatcgtgggaggt
catcacgtcatcaagcgtctgaggaacggcgaggagctgaagggaatcttcatcaaacag
gttctgccaaagagtcctgccgccaagacgctttgtctgaagaccggagacaagatcctg
gaggtgtcaggtgttgacctacgagctgccagtcacgaggaggcggtcagtgccattaaa
tcagctccgagtccgatcgtcttcatcgtccagagtctttgtgcgacgcctcggcctgtc
tctctaacagctcccagctacattaaacacaaagggaagacgatggactctctgaaaacc
acgccccctctgagacagcccccgccctacactgctcccagccaatcagagaacgagctg
aactctgacctggagcaggccaaagagcgctggtgtgagcgttacggagacctgcagggg
gagctgttgtgcgtggaggtggagaaggagcgtcagggtttgggtctcagtctggcagga
aacagggatcgttcccgcctcagcatcttcgtggttggactcagtcctggaggagcggcg
gctcgagacggacgcatccgggttggagatgaactgttggagatcaacaaccagattctt
tatgggcggagtcaccagaacgcctcggccatcattaagagcgccggctccaaggtgaaa
ctcatcctgctcagaaatgaagatgctataaaccagatggctgtcccccctttccctcct
ccccctcctccccctgtgctcagccttgagtgcgtctctccagctgcccctggtgtcccc
gccccctcagacgggccgtgcccccccgacagcctggtgctccacccgccaccaccatcc
tcatcctcctcttcttcatctgagacacaggtgagcctgtgcggtgaagctgaggtggtc
ccagtgacggacccgtcgccaccggacaagacgaacgatgaggccgaacacaacaggaac
agaagcagcgtgagcgccccccagagtctgagcgaggccgacgccctcagaaagagacaa
aaggagtccccagttgacgagctgcaggctccgcgggcgttgctggagcagcagtcctgc
aggtcgtacagcagctccagtaaacagacagcagctgctcctctgatcagccctgacctg
cagactgttaacagagacccatcatgctgtgccgtggttcctggtcaggaaatgatgttg
gagatctgtaaaggtcgatcgggacttggactgagtatagtgggaggaagagacacacag
ctggatgccatagtgatccatgaggtgtatgaggaaggagctgcagccagagatggtcga
ctgtgggcaggagaccagatactggaggtcaacggtgtagacctccggggagcgtcccac
gaggaggcgatcgccgccctgcgtcagacgccggcaaaggtttgtctgacggtgctgagg
gacgaggctcagtacagagacgaggacaacctggacatgtttaaggtggagctgcagaag
aggagcggcagaggactcggactcagcatcgtcgggaagaggagtggcagtggtgtgttt
atctctgaggttgtcagagggggcgtggctcagctggacggtcgtttaatgcagggagat
cagatcacgtcagtgaacggagacgacacgagacacgcctcccaggaaactgtggccgcc
atcctgaagtgtgctcggggtccggtcctgttggagctcggccgactcaaagctgcatcc
tggatctcatccagacgtatctcacagggaagtcagatgagtcatgtgagtggagccagc
tcaggtgtcgtagctccgcccctcacacagcccccagcctcatctgacccccccgcctcc
aaccctccggccgtgacctcctccgtgaccctgctcctcaacaacaacgtcacttcctcc
tctgacatcacttcctcctctgacatcacttcctcctctgccaacaacacaggccctcgt
acagtgacagtcacaaggccccccccccctcagggcgtcagtgactccctcggggtgagt
atagcgggggggaagggtagcccgctgggcgacatcccgatcttcatcgccatgattcag
gccaatggcgtcgccgccaagacgcatcaactcaaggtcggagacaggatcgtcagtatt
aacagtcagtctgtggaaggtctgtcacacagtgaggtcgtcaccatgctgaagaacagc
tacggaggcatcaacctgcaggtggtcgcagacaccaacatcagcgccatcgccactcag
gtggagagtttgtccggcggctttagtctgacggacaacaccgacacacacacagcagaa
ccagagggtccgcggccccgcagcatcagtctggagaaaggctctgaaggactcggcttt
agcatcgttggaggattcgggagtccacacggagacctgcccatctacgtcaagaccgtc
ttcagcaagggagcggcggcggtggacgggcgtctgaaacgaggcgatcagatcctgtcg
gtgaacggagagagtcttcagggagcgacgcacgaacaggccgtcgccatcctgaagaaa
cagagaggaagtgtcacactggacatcctgtcataa
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