Hippoglossus hippoglossus (Atlantic halibut): 117760682
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Entry
117760682 CDS
T07778
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117760682 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117760682 (tprb)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117760682 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
117760682
NCBI-ProteinID:
XP_034439795
LinkDB
All DBs
Position
4:complement(20726729..20746666)
Genome browser
AA seq
2370 aa
AA seq
DB search
MAALLLQELGDSEICKIPKPVQNKLERILSDQQYEIDSLKAQQEQFRVDNEQHFFEKVKQ
LAQCQEEFRSQTQDHLKLKDVFTKLEEDLKTVREKNSEYETVQERLSSEQTLLSKAKEEL
EAEKRDLVRTLERRSLEVEHVNDDLRQLNDKLVEVNTSKMALQMKLDELEAAEVNIKYKE
KRMEQEKELLHGQTSWLNEELKAKSEELLSLSRQKGNKILDLKCSLENKEDELNRLQDQM
VSLKTSNENLQRQSEDMISKLKDAKEQQANMEEKFRNELNANIKLSNLYKGAAADAEAKS
EELSLAVEELHKLLKEAGEANKVLEEKLQESNGATDKTVAELNERIQSLEKELDNANDLL
SSSKLRGPLGTSSVLTEEQMTTMSPTAATVSKIKPGVKLTELYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSAKLEQAFKEVHRLQREADEAN
KHSSVLERDNQRCELQLSDMAQQVRVLLIELEEARGNHIVLEEDVSSADISSTSEVISQH
LVTFRGVEELQKQNQRLLAALRELSEAQEKEEFEGTVSRHGELEQSLGKAQVELESLKEQ
RSQHNKMTESIVRQRDMYRVLLAQATGVSFPQQDALPDDFSLTSTPRRSPAATPTTGTPT
ALVSMATESTEALEAKAALRQLQEVFTTYKKERLEGDKVSTVQSEKFQEQLSDLRSQNAK
ISTQLEFASKRYEMLQDNVEGYRKEIASLREKEQKMIAATQKQEQTIHTLNEDLRAAKEK
LSMAEGCAEGLRKERDMLKLVESRLMQEKESIQSQQQSQNMLLTNLQTIQATLERSETDT
RQRLNNQLEKQEREISQLQKRLENEVEQRHLLSRNQEIQLMETKRQVETQVALYQKTKEL
LSAAELELNSLRLQQGSSEAHHTLSCPSTPTTRGLQVSDQDREHLQGRLRLAETRVEELA
ESLKAVTSSMEQYRAMAQSLEESLDKEKKVTEQARSSIEAHMKEAEIRHRKIEEKLLEAE
KEKQGLEEQKKIALASLEEQINNLRRGLCNAQASQQAALQQVALAEAQQQKAVQDSQEHA
KLAAEAQDKYEREMMLHAADVETLQAAKAQAQQAVELKHQLEEKVQRVSTELLEARISWE
EQEKILMEEMTKIESRFEELQRQNVLLHEQIQTMSSKMAESLQRAASESTTNIYLSEEGK
SQDQVLEILRFVRREKEIAESRYEVAQGETLRHRLRVAHLERELKEMQDSLSAARERMQV
TAKTLAQHDELMTKTETMSILMETNKMLRGEKEKMEQELQQTQAKLQKLESDLMPMQQAN
SELSEKSGMLQAEKKILEDEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEAHLKRIQQL
SEETNRLKADVSRSSNLTTTLQGQILNLRDSMSKITDERNLLKKEVETKNQEILDKVRTI
TQVKKIGRRYKTQYDELKVDHDKMVAEAAAGPSQEEEARQASVQELQSLRDSLNQAEAKT
KELEGQLENINKVVTERETEVRNTQEQSSRLQTELTRLRQDLQDKSSQEDTLRQQMTNKE
EKTRKALVYARQRINQLTSSKDALQKENDELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLRGQQERQEQRDEPPEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIK
PTPVVATAGKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAIQSTEG
PPVEHVTVYGSASGSVRSSSPNVQASLASPMLTVQQTQTQTTAFVQPTQQQSVSHAEPAN
QEPPPLVIEATPSSQVEWPSTSSTSMFATVSGTSSMSKRPREEEESSSMVTDTEAPPEDT
SRAPIPKKLRIIQRVGPEEEVLAEDSAEAEGVVPTDSQDSAEASQTEEFQALEEGEDSAA
SQSMTLDQEMTLTQSDAPEQLSQEVIVIITDTESEEEQEEEDEEEDEQECDEEEEEEDED
EEEEEEEDEEEDEGGMGEEGEESNEGSGDGNEAYEEDDTEGADVTDPGTETEESLGAFDS
TQRPADSQTPCWMEMFSSDQPITSSGSRMPQSPRRPTQQLQTRPNIHPAPSSELGQRMPA
RRQTVGRVPQLTPGLPQHFFDDDDRMVPNAPTLVVPHRDGFDQAVHSPQVAGVPRFRFGP
SDDMPQTSSSSHSDLGQLASQGGLGIYESPLFLTTHEEESGGRSVPTTPLQVTAPVTIFS
EAAQSDSSEHASQSVPMVSTSTPGLLVPGAAGTGEDRDDVFLEPDTDRPSAEASSDQVVS
QGDMEEQSQLSDKASLPSTSQEPSSSSADTSSAPPKPSRPGMSRQLQRWPESRGGRMKRG
GGFHTDFYNNTDLYCQAFPSRGIHGRRFAR
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgttgctgcaggagctgggcgactcggagatttgtaaaatacccaaaccc
gttcaaaacaagctcgagaggattctgtccgatcagcaatacgagatcgactctctgaaa
gcgcagcaggagcagtttcgagtcgacaacgagcaacatttctttgaaaaagtgaagcag
cttgcccagtgtcaggaggagtttcggtcccagactcaagaccatcttaaactcaaagat
gtgtttactaagcttgaggaggatctcaaaactgtgcgtgagaagaacagtgaatatgag
actgtccaagagaggctgtcgtccgagcagactctgctgtcaaaagccaaagaggaactt
gaggcagaaaagcgagatcttgtgcgaactctggaaaggaggtcgttggaagtggagcat
gtaaatgatgacttgaggcagctcaatgataagctggtggaagtcaacacctctaagatg
gccttgcagatgaagctagatgagctcgaagctgccgaagtcaacattaaatacaaggaa
aagcgaatggaacaagagaaggagcttctgcatggtcagacatcttggctgaatgaggag
ttgaaggcaaagagtgaggagcttctctctctctccagacagaagggaaacaagatcctg
gacttgaaatgctccctggagaacaaagaagatgagttgaaccgactccaagaccaaatg
gttagtttgaagacttcaaatgaaaatcttcagagacagagtgaggacatgatcagcaaa
ctgaaagacgccaaggaacaacaagccaacatggaggaaaagttcagaaatgagttgaat
gccaacattaagctctccaatttatataagggtgcagctgcagatgctgaggcaaaaagt
gaagagttgagtctggctgtggaggagctacataaactgttaaaggaggctggagaagcc
aacaaggtccttgaggagaagttacaggagagtaatggtgccacagacaagactgtcgct
gaactaaatgagaggatccagagtctagagaaagagctggataacgccaatgatctgctg
tcgagctctaaacttagaggcccacttggaacatcatctgtgctgacagaagagcaaatg
acaacaatgtctccaacagctgctactgtgtccaagatcaaacctggtgtgaagctcact
gagttgtatactgcctatgtggagagccaggagcagctgcagttggagcgcctggagaac
aaacgagtcaacaagtacctggatgacatagtgcaggaagtggaggcaaaaggccccatt
cttaaacggcaacgtgatgagcatgagcgcatgcagaagtcagtggccagtctttctgcc
aagctggagcaggctttcaaggaggtgcaccgcctgcagagggaggctgatgaggccaac
aagcattcctcagtcttagaacgggacaatcagagatgtgaactgcagctgtccgatatg
gctcagcaggtacgagtgctgctcatcgagcttgaagaggctcgtggaaaccatattgtt
ctcgaggaggatgtgagctcagccgacatcagcagcacatcggaggtgatcagccaacat
ctggtgaccttccgcggtgtggaggagcttcagaagcaaaaccaacgtctcctggcggcc
ctcagggagctcagtgaggcacaagagaaagaggagtttgagggcacggtcagcagacat
ggtgagctggagcagagtttggggaaggctcaggtggagctggagtccctgaaggagcag
cgcagtcagcacaataaaatgaccgagtccatcgtgaggcagagggacatgtaccgtgtg
ctgctggctcaggcaaccggagtgagctttcctcagcaagatgcactacccgatgacttc
tccctgacctccacgcctcgacgctcacctgcagccactcccaccacaggaacgcccact
gctcttgtctccatggcaacagagtctactgaagctctggaggccaaggctgccttgcga
cagttgcaggaggtgtttaccacttataagaaggagcgtttggagggtgacaaggtgtcg
actgtgcagagcgagaagttccaagagcagctctctgacctccgctcccagaatgccaaa
atatccacccagttggagtttgcctccaaaaggtatgagatgcttcaggacaacgttgag
ggctacaggaaggagattgcctccctaagagagaaagaacagaagatgattgctgctaca
cagaagcaggagcaaactatccacactttgaatgaggatctgagagctgccaaagagaaa
ctctccatggcggagggctgtgctgagggcctgcgtaaggagagagacatgctgaagttg
gtggagtccagattgatgcaggagaaagaatcaatccagagtcaacaacagagccagaac
atgctgctgacaaacctccagacaattcaggcgactcttgagcgttcagagaccgacaca
cgccagcgtcttaacaaccaattggagaagcaggaacgggagatctcccagctgcagaag
cggctggagaacgaggtggaacagcgccacctgctcagcagaaaccaagaaatccagtta
atggagacaaagaggcaagtggagacgcaggtggctttataccagaagaccaaagagctg
ctgagtgctgctgagttggagctcaactccctccggctgcagcaaggcagcagcgaagca
catcataccctgagttgcccctccacacccaccaccagaggcctgcaggtatcagatcaa
gacagagagcaccttcagggccgcctgaggttggctgagacccgcgtagaggagctggca
gagagcctgaaggcagtaacctccagcatggagcagtacagagccatggctcagagcctg
gaggagtccctggataaagagaagaaggtaacggagcaggcacgctcatccattgaagcc
catatgaaggaggctgagattcggcaccgaaagattgaggagaagcttctggaagcagag
aaagagaagcaaggcctagaagagcagaagaagatagctctagcttcactggaggaacag
ataaacaatctaaggagaggtttatgcaacgctcaggcatctcaacaggcggcactacag
caggtagcactggctgaggctcagcagcagaaagcggttcaggacagccaggagcatgct
aagctggcagcagaagcacaggataaatatgagcgggagatgatgctgcatgcagcagat
gtggagactctgcaggctgcaaaggctcaggcgcagcaggccgtcgagctcaaacaccag
ttggaagagaaagtacagagggtcagcactgagctcctggaggccagaatctcctgggag
gagcaggaaaagatcctcatggaggaaatgaccaagattgagagtcgctttgaggaattg
cagagacagaatgttctcctgcatgagcagatccagacaatgagcagcaagatggccgaa
agcttgcagcgtgccgccagcgagagtactacgaacatttacctgagtgaagagggcaaa
tctcaagaccaagtgcttgagattctcaggtttgtgcgtcgggagaaggagatagcagaa
tcccgttatgaggttgcccaaggtgagactttgcgtcatcggctgagggtggcgcacctg
gaacgagagctgaaggagatgcaggacagcttgagtgctgcaagggagaggatgcaggtg
acagcaaagactctggctcagcacgacgagctgatgaccaagaccgaaacgatgagcatc
ctgatggagaccaacaagatgctgagaggggaaaaggaaaagatggagcaggagctgcag
caaacccaagctaagttgcagaagctggagtcagacctcatgccaatgcagcaggccaac
tctgagctgagtgagaagagcggcatgctgcaggcggagaagaagatcctggaagacgag
atcaagcgctggaaagctcgaacgcagcatttggtgagtcaacagaaagattcagaccca
gaggagtacaagcgtctgcactctgagaaggaggcacatctcaaacgcatccagcagctc
tctgaggagacgaacagacttaaagcagatgtgtccaggagcagtaacttaacaactacc
ctacaaggccagatactgaacttgcgtgacagtatgagtaagataactgatgagcgaaat
ttgctgaagaaggaagtggaaaccaagaaccaggaaatcctggacaaggtgcgaactatc
acgcaggtcaagaagatcgggcgtcgctacaagactcaatatgatgaactcaaggtggat
catgacaagatggtggctgaggccgcagcaggtccctcccaagaagaagaggctcgtcag
gcatcagttcaggaactccagagcctcagagattctctaaaccaggctgaagccaagacc
aaagagctggaaggacagctggagaacataaacaaggtggtcacagagcgggagactgaa
gtgcgtaacacccaggaacagtcctccaggctgcagacagagctgaccaggctgaggcag
gatttgcaggataagtcttcacaggaggacacactgaggcagcagatgaccaacaaagag
gagaagacccgaaaggccctggtttatgccagacagaggatcaaccagctcactagctcc
aaagacgcgctgcagaaggaaaatgatgagctaaagcagcagcgtgaggagctggaggtt
cgagtgagcgctctcaagtcccaatacgagggccgcctgagtcggcaggagagagaactg
agagacctgcgaggtcaacaggagcgacaagagcaaagagatgagccacctgaggcaggt
cctagcaagacccaggagcagcagaggagcacagaacagaggcagatcagtctgaagaca
actccagctgcagacaggggcagtgccagcacctccgaacctccaactgccaacattaag
ccaacgcctgtagtcgcaacagccggcaagcagccggtcaacccggggaacaaacccact
ccaagagcaagcatccggcctatgatcactccagcgactgtacccacaccaacccccaca
gctacagtcatgcccaccactcaggtggagacccaggaagccattcagtctactgaaggc
ccaccagtggagcatgtgaccgtgtatggcagcgccagtggctctgtgcgctcgtccagc
cccaatgtccaggcctctttagccagccccatgttgaccgttcagcagacccagacacag
acgacggcatttgttcaaccaacgcagcaacagagcgtgagccatgcagagccagccaat
caggagccaccacctctggtcattgaggccacacccagttcacaggtggaatggccttcg
acttcctccacctctatgttcgccactgtttcaggaacttcctccatgtccaagaggcct
cgagaggaggaggaaagcagcagcatggtcactgacacagaagccccgccggaggacacc
tccagggctcctatacccaagaagctacgcatcatccagagagtgggtccagaggaggag
gtgctggctgaggacagtgctgaggctgagggcgtcgtgccaacagacagtcaagacagt
gcagaggcaagtcagacggaggagtttcaagcactggaggaaggagaggacagtgccgcc
tcacagtccatgactttggaccaagagatgacgctgacgcagagtgacgcccccgaacaa
ctgtcacaggaagttatcgtcataataacagacactgagagtgaggaggagcaggaagag
gaggatgaggaggaagacgagcaggaatgcgatgaggaggaagaggaggaagatgaagac
gaggaggaagaagaggaagaggatgaagaggaagatgagggagggatgggggaggaagga
gaggaaagcaatgaggggagcggagatggcaacgaggcctatgaagaagatgacacagag
ggagctgacgtcacagacccgggcacggagactgaggagagtttgggggcgtttgactcc
acccagagaccagcggattcccagacaccctgctggatggagatgttttcctccgatcaa
cctatcacaagctctggttcacgcatgccccagtcgccacggagaccaacgcaacagctg
caaacccgcccgaacatccaccctgccccatcatcagaactgggacagcgcatgcctgct
cgtcgtcagacagtgggcagagtccctcagctcactcccgggctgccgcagcacttcttc
gacgacgacgacaggatggttcccaacgctcccactctggtggtaccgcaccgcgacggg
ttcgaccaggccgtccattctccgcaggtggccggtgtgcctcgctttcggttcggccct
tcggacgacatgccccagaccagctcgtcttcacactctgatctgggacaactggcatca
caaggaggtcttgggatatatgaaagccccttgttcctcacaactcatgaagaagagtct
ggtggacgcagtgttcctaccaccccactgcaagttacagccccagtaaccatcttctca
gaggcggctcagtctgacagcagtgagcacgcctcgcagtcggttcccatggtgagcacg
tccacgccaggcctgctggtgccaggagcagccggcacaggggaggacagagatgatgtc
ttcctggagcctgacactgataggcccagtgctgaagcgtcgtcggatcaggtcgtgtct
cagggagacatggaggagcaaagtcagctgtctgacaaggccagcctcccctccaccagc
caggagccctcctccagctccgcagatacaagcagcgcgccgcctaaaccctctagacct
ggaatgagcagacagctgcagcgctggccggagagccgcggcggccggatgaagagagga
ggaggcttccacacagacttttacaacaacactgatctttattgtcaggcgtttccttct
cggggaatacacgggagacgattcgccagatga
DBGET
integrated database retrieval system
