Hippoglossus hippoglossus (Atlantic halibut): 117760907
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Entry
117760907 CDS
T07778
Symbol
stab1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117760907 (stab1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hhip00536
]
117760907 (stab1)
Glycosaminoglycan binding proteins [BR:
hhip00536
]
Hyaluronan
Cell surface receptors
117760907 (stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
Xlink
EGF_Teneurin
FXa_inhibition
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
117760907
NCBI-ProteinID:
XP_034440197
LinkDB
All DBs
Position
5:complement(4348528..4399775)
Genome browser
AA seq
2546 aa
AA seq
DB search
MLLLLLLLLLRLQTSLQQPTPPPGRCDISQRVDVHTSCTSCAAVTTVSCPHGFGSVGTIN
CSYVVQIGGSNVPLGGCQHICAKGFMEPHCCPQHWGTLCLPCPSWSGRTCNFHGACQDGD
LGNGTCVCDEGFSGFACQECNNPNAFGEKCDKECDCVHGVCSKGPDGDGQCLCQPPYTGK
ICDQVNSRCSNCNPYSFCSGEGDTASCECLPGYRKTALGKCGSICSTRDCDVNAECSSQG
SKISCVCKPDYQGDGRICVPRNLCSENNGGCPMNSTVCVFKGPNKSSCECMFGMSPVGGS
PESGCELVSACSADTCDPTAVCQTELDGQPRCVCEAGQIGDGRRCYGNLMERVIELGRSG
RQRENLTEAVTLFEKGCFLLLSHNGPFTAFIPLMKTPLTGVNEEEVCKNHLILGQHLYKD
LEGRDINLYGGAKFRSKDNKRFILMENPSRPYTVLQEDLPAANGIIHIIDRPITVTLSDR
HPLDEQFADKTIGEILTKDPKYNRFLSLVDNCGSPPPLRGPGPLTVFVPTNQAVDLARDG
SILYMLNDAKHKLQELLRHHVFSKAVLTVDELSSLPKILTMANQIVTISVSNDGEILLGE
KGVRLVTTNIVASNGVIHMIDGLLYPPSILPILPHRCDIIDYKITVGPCVHCSYLYETEC
PGGSTEMDKHQTGCLYLASPVAHKQSSGCAKYCNTTKQVAECCKGFYGPDCKPCIGGFQN
PCYDKGACIDGIHGNGSCSCQSNFKGVACHICSDPSKHGENCDEECRCLHGLCDNRPGSG
GVCRRGSCYDGYSGDSCDKTATPCNSDGLQEHCHIHAYCTHTGLHTMCVCRDGYEGDGHS
CSHINLCLKSNRGGCDTNAECVYMGPGNMSCVCVEGWTGDGKVCVEINNCQLASQSGCSP
NANCNHLGPGQSECVCKKGYMGNGIVCDLINPCRQYNGGCHAVAKCEPKNGTRTCTCPEG
FAGDGTICYGSLLEEMDMSPQMFMFHMRFHWCPAVSQELSGGNMTVLVPSAKAMSNITSG
ESLFWFNRHHLPHFLRAHILPGIYLMEDLEGLVGSRLPTLNPLTSWEISNSSGVIHIGNA
TIITRNLPATNGYIHIIDQVLAPPLSGLPPVPPPLMGFLNSSSNFTLFRQYALLYNLSES
LHKADNTILMPTDDAIRQHLSETNSSVLEPDVFKYHVIYNSLLYPDQLSDGLLESTLLGR
DYQVQFHLNDNNQTVVNNVPVEGTFFETYNAILIVLPQVLKVRRNRCSREVYMQRDGRCT
DCKGEPRCLFSFKPIKEQFPADMQPNCQYRKRFNSRRKWTPGCVIKCVHSTLDHTCCTGY
FGHECFKCPGDVGSWCSNNGECKDGVHGNGECSCYEGFHGTACEDCEPGRFGVNCSSKCV
CDHGKCEDSLAGSGRCLCYKGWKGSSCSVEIKDDACGGLCDENANCITGPQGVAAACLCV
AGYEGNGTYCKELDLCRRSNGGCSEFAVCMKVSAGVRTCTCKEGYTGDGVVCLELDGCLV
NNGGCHKSADCIRAGPNITACKCRLGFQGSGRFCFPANPCRTNNGGCSRYARCLYMGDGQ
RNCTCTNNHVGDGIECRGITFFEVYRSTENQYLHRMLSLSKTRSLNDGGPVTVFVPVMEI
YNATTIEEWRLRGRLPDLTLNHLVSCEILTLSDLKTTERVVSLSGHMLHFSVQQGSVWIN
NRSRIVKSDYTTPDGVIHHIDALLTPYQLQDKPLLLPDRMNFTTAAAFYGYSRFFKLVED
AGLLPVVQMAVHQPFTMFWPTDEALNSLPAEQQRLLSSPDHQELLAATVKAHIIRNVKLV
STPQLTKYRKEYRTMHGSTLKFSCGKSVVGTILINENQAKLLEFHLNFKEGVAYGIDHLL
EPPGLGAHCDNLENRTSYGRCESCHFPPPCPINHQDTGNVEPCTIRHRGSYRRLRFYGSN
PFGRVGCKRVCQSPVWVQKCCKNHYSRDCQVCPGGLEAPCGKGGTCDDGLRGSGICRCFT
GFRGQACELCRDGYFGPNCTACRCGPQGRCDQGLEGSGQCTCKPGWKGESCKTDIGSIPE
ECRECHDQADCVLGAGCRCKAGFRGNGTFCGPEPPPDLCSEYNGGCHQNADCNQTGLVVN
CTCQSDYRGDGYSCQPINRCVEETNGGCSDFASCKFTGPNERDCECLSGYVGNGVQCLEK
LVPPVDRCLERNGDCHPVASCEDLHYHANTAGVYHLRSPEGKYKMNYSEADAACQAEGAT
LANFTQLGDAQQLGMHLCVAGWIEGGRVGYPTRFPSVKCGDNHVGLVMYKEPVDQSSKYD
TYCYRLRDVSCTCPPGYIGDGDFCNGVLTNVLATYSSFSIFYKLLLDYSDSTSDGKQLVE
FLSHRKSEVTLFVPHNDGFSPNQTLSGRDLEYHISANHSRRLFKDLRPEEVITSRLGFNL
TVTHGNNETLKLVNKRLLLYWDILAVNGIIHIIEAPLSAPPPAISYDASKGHGHSSGTVS
AILVSMLLACVLAALGYYVFKHKTDAFRFQYFRNEDEDGAAGGSNKPALVSIPNPLYSGS
RAFTEPFGEPNPGVEPAEPPKILDLD
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctgctgctgctgctgctccgcctgcaaacgtcactgcaacaaccgact
cctcctcctggtcgatgtgacatctcacagagggtggacgtgcacacctcatgcacttcc
tgtgccgccgtcaccactgttagctgcccgcacggcttcggcagcgtgggcaccataaac
tgcagttacgtggtgcagatcggtggcagcaatgtgccgctgggcggatgtcagcacatc
tgtgcgaagggtttcatggagccacattgttgcccacagcactggggaacgctgtgtctc
ccctgtcccagctggtcagggaggacctgtaacttccatggagcctgtcaggacggagac
ctgggcaacgggacctgcgtctgtgatgagggcttctctgggtttgcctgtcaggagtgt
aataatccaaacgcttttggagaaaagtgtgataaagagtgcgactgtgtgcatggagtg
tgcagtaaaggtccagacggtgacggacagtgtttgtgtcagccgccgtacaccgggaag
atctgtgaccaagtgaactccaggtgcagcaactgcaacccctactcgttctgtagcgga
gagggagacaccgccagctgtgaatgtttgcccggatacaggaagacagcactgggcaaa
tgcggaagtatttgttcaacaagagactgtgacgtcaacgccgagtgctcctcacagggg
tcaaagatcagctgcgtctgcaagcccgactaccagggtgatggaaggatctgtgtaccc
agaaacctttgctcagagaacaatggagggtgtcccatgaactccaccgtgtgcgtcttt
aaaggacccaacaagtccagctgtgagtgcatgtttggcatgtcccctgtaggtggcagt
cctgagtccggctgtgagctggtttctgcttgttcagcagacacgtgtgaccccacagct
gtttgtcagactgagctggatggacaaccccggtgcgtgtgtgaggcaggtcagatcggt
gatggtcggcgttgctatggtaacctgatggagcgggtcattgagcttggcaggagcgga
cgccagagagaaaatctgactgaggccgtcaccctgtttgagaaaggctgttttctgctg
ctgagtcacaacggccccttcacagctttcatccccctaatgaaaacacctctaactggc
gttaatgaggaggaggtgtgtaaaaaccacctgatcctgggtcagcacctctacaaggat
ctggagggacgggacataaacctgtatggaggagccaagttcaggagcaaagacaacaag
aggttcatcctgatggaaaaccccagcagaccatacaccgtcctccaggaagacctgcca
gcagccaatgggatcatccacatcattgaccggccaatcacagtcactctgtctgatcgg
caccctcttgacgaacagtttgctgataagacgatcggagagattctgactaaggatcca
aaatacaaccgcttcctatctctggttgataactgcgggtcgccacctcctctgcggggt
cctgggcccctgacggtgtttgttcccaccaaccaggcggtggatctagcgcgagacggc
agcatcctgtacatgctgaacgatgccaaacataaacttcaggaactcctcagacaccac
gttttctccaaggctgtgctgacagtcgacgagttgtcctctcttcctaagatcctgacg
atggccaatcagatcgtcaccatttctgtgtccaatgatggtgagatcctgttgggggag
aagggcgtccgtctggtgaccaccaacattgtggcgtccaacggggtcatccatatgatt
gacgggctgctgtacccgccctccatcctccccatcctgcctcaccgctgtgacatcatc
gattacaagatcaccgtgggaccgtgtgttcactgcagttacctctatgagacagaatgt
ccaggtggcagcactgagatggacaaacatcagaccggctgtttatacctcgcgtctcct
gtggcacacaaacagagttcaggctgcgctaagtactgcaacaccaccaagcaggtagcg
gagtgttgtaaaggtttctatggtccagactgtaaaccctgtattggaggattccagaat
ccctgctacgacaaaggagcgtgcattgacggtatccatggcaacggctcatgcagctgt
cagtcaaatttcaagggtgtcgcctgccacatctgctcggatccatccaagcacggagag
aactgcgatgaagagtgtcggtgtctccacggcctgtgtgataaccgtccaggcagtggt
ggtgtttgtcgaagaggatcttgttatgatggatactctggagacagctgtgacaagacg
gccacgccctgtaactccgacgggctgcaggagcactgtcacatccacgcgtactgtaca
cacacaggactgcataccatgtgtgtgtgtagggatggatacgagggtgacggtcactcc
tgctctcacataaatctttgcctgaagagcaaccgaggaggctgcgacaccaatgcagaa
tgtgtgtacatgggtccaggtaacatgtcgtgtgtgtgtgtcgagggctggacaggtgac
ggcaaagtgtgtgtggagatcaacaactgtcagttggcgagtcaaagcggctgcagcccc
aacgccaactgtaaccacttgggacccgggcagagtgagtgtgtgtgtaaaaaaggttac
atgggcaacgggattgtgtgtgacctgatcaacccctgtcgccaatacaacggaggctgc
catgccgtggcaaagtgtgagccgaagaacggcactcgcacctgtacctgtcctgaaggc
ttcgctggagatgggaccatctgctatggatcattactggaggaaatggacatgagccca
cagatgttcatgttccacatgcggtttcattggtgtcctgctgtctctcaggagctaagc
ggtgggaacatgacagtgttggttccgtcagcaaaagcaatgagtaacatcacttcaggt
gaatccttgttctggttcaatcgccaccacctgcctcacttcctgcgggcccacatcctg
ccaggaatctacctcatggaggatctggagggactggtgggcagccggttgcccacttta
aaccctctcacctcctgggagatcagcaacagcagcggcgtgattcacattggaaacgcc
accatcatcacacgcaacctaccggcaacaaatggctacattcacatcatagaccaggta
ctggcaccgccactttcaggactcccccccgtgcctcccccgctgatgggcttcctgaac
tcctcctccaacttcactctcttcagacagtacgctctgttgtacaacttatcagagagc
ttacataaggcagataacaccatcttgatgcccacagacgacgccatcaggcaacacctc
agcgagactaattcctccgtcctggaaccggatgtgttcaagtaccatgtgatttacaac
agcctgctctaccctgaccagctgtctgacggcttgctggagagcacgttgttgggccgc
gactaccaggtccagttccacttaaacgacaacaaccagacagttgtgaacaacgttcct
gttgaaggcaccttttttgagacgtacaacgccatcctcatcgtcctcccgcaggtcctc
aaagtccgccgcaacagatgcagcagagaggtctacatgcaaagggatgggaggtgtacc
gactgcaaaggagaacctcgatgcttgttcagcttcaaaccaatcaaagaacagtttcct
gcagacatgcagccgaactgtcaatacaggaagcgttttaattcccggaggaagtggacg
ccaggctgtgtcatcaaatgtgttcattccaccttggatcacacctgttgcaccggctac
tttggtcacgagtgcttcaaatgccctggggatgtcggcagctggtgctccaataatggg
gagtgtaaggacggtgtccatggcaacggggagtgcagttgctacgagggtttccatggc
accgcatgcgaggactgtgaaccaggaagattcggagtcaactgctcctccaagtgtgtg
tgtgaccatgggaagtgtgaggacagtctagcaggaagcggcagatgtttgtgttataaa
ggttggaaaggatcgtcctgctctgtagagatcaaggacgacgcctgtggaggtctgtgt
gacgagaacgccaactgcataacagggccacagggagtagctgctgcttgtctgtgtgtg
gctggatacgaaggcaacgggacctactgcaaagagctggatttgtgcaggaggtctaat
ggtggatgctcagagtttgcagtctgtatgaaagtctccgcgggagtgaggacctgtacc
tgcaaagaggggtacactggagacggagtcgtctgcctggagctggacggctgtctggtg
aacaatggaggctgccacaagtcagcagactgcatcagagcaggtcccaacattacggcc
tgcaaatgtcgactgggctttcaaggatcaggcaggttttgttttcctgccaacccctgt
agaaccaataatggtggctgcagtagatatgctcgttgtctgtacatgggcgatggccag
aggaactgcacctgcacgaacaaccatgtgggcgacggaattgagtgtcgtggaatcacc
ttctttgaggtgtatcgatcgactgagaaccagtacttacatcgaatgctgtctttatca
aaaactcggagtcttaatgatggcggaccggtcactgtctttgttcctgttatggagatc
tacaatgctactactattgaagaatggaggttacgtggtcgtctccctgacttgaccctt
aaccaccttgtctcctgtgagattttgaccttgagtgacctcaaaacaaccgagcgtgtc
gtctcattgtcgggacacatgctacacttcagcgtgcagcagggttcagtctggatcaac
aacagatcgaggattgtgaagagtgattacaccacaccggacggagtcattcaccacatc
gacgcgctactgacgccttaccagctgcaggacaaaccacttctcctgcccgacaggatg
aacttcaccacagcagctgcattttatggctacagccgcttcttcaaactcgtggaggat
gcagggctactccctgtggtgcagatggccgtccaccagccgttcaccatgttctggccc
acagacgaggccctcaactccctgccagccgaacaacagcgtctgctctccagtcccgac
caccaagaactcctggctgctactgtgaaggctcacattatacgtaacgtaaagttggtc
tctacccctcagctaaccaaatatcgcaaggagtaccgcaccatgcacggatccaccctc
aaattcagctgtggcaagagcgtggtggggactatattgattaatgaaaatcaagccaag
ttgttggagttccacctgaacttcaaagagggcgtggcctatggcattgaccatttactg
gagccacccggcctgggagcgcactgcgacaaccttgaaaacagaacttcttacgggagg
tgtgaaagctgccacttcccgccaccctgccccatcaatcaccaagatacgggaaatgtg
gagccttgtacgattcgccacagggggagctaccgacgtttgcgtttttacgggtcgaat
cctttcggccgagtgggctgtaagagagtctgtcagtctcctgtctgggtccagaagtgc
tgcaaaaaccactacagccgagactgtcaggtctgtccaggtggcttggaggccccttgt
ggaaaaggcgggacctgcgacgatggtttgcgtggttcaggaatctgcaggtgcttcaca
ggcttcagaggacaagcctgtgaactgtgccgcgacggctacttcggccccaactgcaca
gcctgtcgctgtggaccacagggaaggtgtgatcagggccttgaaggttctggacagtgc
acctgcaaaccgggctggaagggtgagagctgtaagactgacattggctcgatcccagag
gagtgccgggagtgtcatgaccaggccgactgtgtgctcggtgctgggtgtcggtgtaaa
gccgggtttcggggaaacggtaccttctgcggtccagagccacctccagacctctgctcc
gagtacaacggcggctgtcaccagaacgcagactgcaaccagacgggactggtcgtcaac
tgcacctgtcagagtgattaccgaggtgacggttactcctgccagcccatcaacaggtgt
gttgaggagacaaacggcggctgcagcgacttcgcctcctgcaagtttactggtccgaac
gagcgggactgtgagtgcctgtcggggtatgtgggtaatggagtccagtgtctggagaag
ctggtgccccctgttgaccgctgcctggaacgtaacggagactgccacccagtggcctcc
tgcgaggacctgcattatcatgccaacacagctggagtgtaccacctgcgctccccagag
gggaagtacaagatgaactacagcgaggccgacgccgcctgccaggccgagggcgccact
ctggccaactttacacagctgggagacgcacagcagctggggatgcatctgtgcgtggcc
ggctggattgagggggggagagtgggctacccgacccgcttcccttcagtcaaatgtgga
gacaaccacgtgggcctggttatgtacaaagaacccgtggaccagagcagcaagtacgac
acctactgctacaggctcagagatgtttcgtgtacatgtccccctggttacatcggagac
ggagacttctgtaacggcgtcctgaccaacgttctggcaacatatagcagcttctccatc
ttctacaagttactgttggattatagcgactcgacgtcagacggcaaacagctcgttgaa
tttctctctcacaggaagtccgaggtcacactgtttgtccctcataatgacggcttcagc
ccgaaccagactctgtctggtagagatctggagtatcacatctcagccaatcacagcaga
cgactgttcaaagatctgagacctgaggaagtcatcacatcgaggctcgggttcaacctg
accgttacccacggcaacaacgagaccttgaaactggtgaacaagcggctgctgttgtac
tgggacattcttgctgtaaacgggatcattcacatcatcgaggctccactgtctgccccc
ccgcctgcgatctcctacgacgcctccaaaggccacggccactccagcggcacagtgtca
gccatcttggtttcgatgctattggcatgtgtgttggctgcgctcggctactacgtcttc
aaacacaagaccgatgccttccgcttccagtacttcaggaatgaggatgaggacggtgca
gccggcggcagtaacaaaccagcgctggtttcgatccccaaccctctgtacagcggctcc
agggccttcaccgagccgtttggggaacccaatccgggagtggaaccagcagaacctcca
aagattctggacctggactag
DBGET
integrated database retrieval system
