Hippoglossus hippoglossus (Atlantic halibut): 117760942
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Entry
117760942 CDS
T07778
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00450
Selenocompound metabolism
hhip00970
Aminoacyl-tRNA biosynthesis
hhip01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117760942 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117760942 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhip01007
]
117760942 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhip03016
]
117760942 (mars1)
Enzymes [BR:
hhip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117760942 (mars1)
Amino acid related enzymes [BR:
hhip01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117760942 (mars1)
Transfer RNA biogenesis [BR:
hhip03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117760942 (mars1)
Prokaryotic type
Other AARSs
117760942 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C
GST_N_3
GST_C_2
GST_N_2
tRNA-synt_1e
GST_N_4
Motif
Other DBs
NCBI-GeneID:
117760942
NCBI-ProteinID:
XP_034440260
LinkDB
All DBs
Position
5:9872339..9888474
Genome browser
AA seq
926 aa
AA seq
DB search
MKLFLSEGNPHCLKVLAAVQVTGVPCDVQYVNHEETVVPFLSRPTLPALTLPSGWHLFSS
NAICQYLYEVKGQDSTDLCNQWLEWEATDLQPALLQALHMAVLQGKASEVSQVLQAPLNY
LDQGLTKGNTPYLTGEAVSVADVVLWAALYPLLSDSSLALGERKSVKAWFDRMAEMHGCQ
SAAQKVLQGKGLQGMKSYMQRQPARQSNQCRDAQPCNSSPAECEEGERVVSEEEMEAAAL
SWSTGLKDSPQVTDRQHPILPQEGKRNILVASALPYVNNVPHLGNIIGCVLSADVFSRYA
RLRDWNLLYVCGTDEYGTATENKAREEGLTPQQICDKYHAVHADIYKWFQIDFDFFGRTT
TEKQTEIAQNIFWRLHKHGFLLEDTVEQLRCEKCQRFLADRFVEGICPYCSYPEARGDQC
DKCGRLINAVELREPQCKVCGQTPVVCSSKHLFLDLPKLEAQLEQWLDKSMSTGDWTQNA
KQITRSWLRDGLKPRCITRDLKWGSPVPHPDFKEKVFYVWFDAPIGYLSITANYTDQWEK
WWKNPSQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHIVATEYLNYEDTKFSKSR
GTGVFGDMAKDTGIPSDVWRFYLLFVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAG
MFVTKFFEGCVPAMELQQEDKKLLALVSWELQQYIQLMDKVKIRDALKLILNISRHGNQY
IQVNEPWKNIKGGDAERQRAGTVTGVSVNIACLLSVMLLPYMPTVSQTIRDQLNAPQSGL
HTMFQGTGTFVCSLRAGHRIGNVSPLFQKLEPDQIEALKKKFGGQQPEDEPPQKKKTAQS
AASSQPAAVPAPAAAEATVSGADPEKAKLLTQAVTEQGEKVRALKAQKAEKAAITAEVAK
LLDLKKQLAVAEGKNPEPAPQKSKKK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttttaagcgaaggcaacccgcactgcctgaaggtgttagccgccgtacag
gtgaccggggtcccgtgtgacgtccagtatgtcaaccacgaggagacagtggtgcccttt
cttagccgtccaactctgccagccctcaccctgcccagtggatggcacctcttcagctct
aatgccatctgccaatacctctatgaagtaaaaggacaagactccactgacctttgcaac
cagtggctggaatgggaggccacagatctccagcctgcactgcttcaggctcttcacatg
gcagtgctgcaaggaaaggcttcagaagtgtctcaggttctccaggcgcccctaaactac
ttggaccaaggcttgactaagggaaacacgccatatttaacaggggaagctgtctctgtt
gctgatgttgttttgtgggctgcgctgtaccctcttttatctgactcgtcactcgcactg
ggtgaacgcaagtctgtgaaggcctggtttgaccgaatggctgagatgcacggttgccag
tctgctgctcagaaagtgctgcaggggaaaggcctgcagggcatgaagagctacatgcag
agacagcctgcccgtcagagcaaccagtgcagagacgcacagccatgcaatagcagccct
gctgagtgtgaagagggagaacgtgtggtttctgaagaggagatggaagctgctgctctc
tcctggagcactggtttgaaagacagcccacaggttacagacagacaacaccccattttg
ccacaggagggcaaacgaaacatcctggtggccagtgccttgccttatgtcaacaatgtc
ccccacttgggtaacatcattggttgtgtcctcagcgctgacgtcttctccaggtacgct
cgtctgcgagactggaacctgctgtatgtgtgtggcacggatgagtacggcacagcgacg
gagaacaaggccagagaggagggcctgacaccgcagcagatctgcgacaagtaccatgct
gttcacgccgacatttacaagtggttccagattgactttgactttttcggcagaaccacc
actgagaagcagacagagattgctcagaatatattctggcgactccacaaacacgggttc
ctgctggaagacacggtggagcaactgcgttgtgagaagtgtcagcgttttctggctgac
cgcttcgtagaaggcatttgtccttactgcagctacccagaagctcgcggtgatcagtgt
gacaagtgcgggcggctcataaatgcagtggagctcagggaaccccaatgtaaggtctgt
gggcagactccagtcgtctgctcctccaaacatcttttcctcgacctgccaaagctggag
gctcagttggagcagtggctggacaagtcgatgagcacaggagactggactcaaaacgcc
aaacagatcactcgctcctggctgagagatggactcaaaccacgctgcatcaccagagac
ctgaagtggggaagcccagtgcctcaccccgactttaaagagaaggtcttctacgtctgg
tttgatgcaccgattggttacctgtccattaccgccaactacaccgaccaatgggagaag
tggtggaagaatcccagtcaggtggagctgtataacttcatggccaaagacaacgtgcca
ttccacagtgtagtattcccctgctccctactgggagctcaagacaactacactctggtc
aaccacatcgttgccaccgaatatctgaattacgaggacactaaattctccaagagtcgt
ggcactggcgtgtttggagacatggctaaagacacgggcatcccatccgacgtgtggcga
ttctatctgctgtttgtgcgtccagagggacaggattcagccttctcctgggccgacatg
gctctgaagaacaactccgagctgctcaacaacttgggcaacttcatcaacagagccggc
atgtttgtcactaagttctttgagggctgtgtgcctgcgatggagctgcagcaggaagat
aagaagctgctggccctggtgagctgggagctgcagcagtacatccagctcatggacaaa
gtcaaaattcgtgatgctctcaaactcatcctgaacatctctcgccatggcaaccagtac
attcaggtcaacgaaccctggaagaacatcaagggaggagacgcagaaaggcagcgtgcg
ggcacagtcactggcgtctctgtgaatatcgcttgcctgctgtcagtgatgctgttacct
tacatgccaacagtgagccaaaccatcagggatcagctcaacgcccctcagtccggcctc
cataccatgttccaaggcactggcacctttgtctgttccctgagagcgggccaccgcatc
ggcaatgtcagtccgttgttccagaaactggagccggaccagattgaggctttgaagaag
aaatttggtggacagcagcctgaagatgaaccacctcaaaaaaagaagacagctcagagc
gctgccagctcgcagccggccgctgtgccagctcctgctgctgctgaggcaacggtgagc
ggagcggacccagagaaagccaagctgctcactcaggctgtgactgagcagggagaaaag
gtgcgagcgctcaaagcccagaaggcggagaaggctgcgatcacagcagaagtggccaaa
ctgttggaccttaagaaacagctggctgtggctgaggggaagaaccctgagccggcacct
cagaagagcaagaagaagtga
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