Hippoglossus hippoglossus (Atlantic halibut): 117761086
Help
Entry
117761086 CDS
T07778
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03083
Polycomb repressive complex
hhip04980
Cobalamin transport and metabolism
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117761086 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117761086 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117761086 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117761086 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117761086 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117761086 (hcfc1a)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117761086 (hcfc1a)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117761086 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
117761086 (hcfc1a)
MLL-HCF complex
117761086 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117761086 (hcfc1a)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117761086 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
117761086
NCBI-ProteinID:
XP_034440583
LinkDB
All DBs
Position
5:complement(23427719..23442293)
Genome browser
AA seq
1732 aa
AA seq
DB search
MSAPGSAVSGTTAAVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVMSATPSQ
PVNSPRSPALAVAAPSAQSLPQTAILKVAAQQSATGTSVVTVRPSQPGKSPITLTSLPPG
VRMVVPAQTTQGSVRKQFATHLVPIGSSPQMSGMAALAAAAAATQKIPPSSAGTLLNVPA
GATILKTVAVSPGTTTVKMASPLMVSNPATRMLKTAAAQVGTATASSPTTNRPIITVHKS
GAVTVAQQAQVVTTVVGGVTKTITLVKSPLTMGSGGTLISNLGKMMSVVQTKPVQTAISG
QGSTNPLAQLIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGHKPTILNISGVSPT
TKQGTTIIKTIPMSAIMSQSGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLAT
AAGQQGLTQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGV
TTLGTVTGTVSSSLAGGTVDSSKASLVTPITTLGTISTLSSQVISPAAITVSAAQTSLTS
ASTLASSTITVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGEGS
GTVTLVCSNPPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATIG
ARQVCSNPPCETHETGTTNTATTASSNMSALRMCSNPPCETHETGTTNTATTASANMGGS
QQVCSNPPCETHVTGTTNTATQASSNMNAGQTGTVQRVCSNPPCETHETGTTNTPSTATS
SMGGDQTNTATGTVQRVCSNPPCETHETGTTNTATTATCSMETGEGTAAQQTEEGTEGTS
STEVASTTAATGVATAGVAAATATAAATTTTQGRAITTVTQSTPAPGPSVPSISSITEGV
STAASSTEEPMQTNEAVSAEAAPAEEGATAMETQAEGEAAATDLNLPSELMSEGQGATLM
VTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMHEGDSAGESQQPTNIP
IMLTQQELAALVQQQQQLQEAQAAAQQATVDASLPTEGLAPADSLNDPSVESNGHNEMAA
AVTSAVASLLPRTTAETLAPSSTFAPSVSVASPAKLQAAAALAEVANGIEGEKQAPQPTP
VKPVVKKENQWFDVGIVKVTNMVVTHFYVPADDSHGDDDSGVMPDYSQMKKMELQPGTAY
KFRVAGINACGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIE
YSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRI
AARNEKGYGPATQVRWLQESGKDAASAKPAPKRPGTSPDTKATGPKKARTDQ
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacggcggcggttctgcagccgcggtgg
aagcgggtcctcggatggtccggtccagttccccggcccagacatggacacagagctgtg
gctataaaggagcttatggttgtctttggtggtgggaacgaagggatcgtggatgaattg
catgtatacaacaccgcaacaaaccagtggtttatcccagcagtccgtggtgatatcccc
cctggttgtgctgcgtatggttttgtctgtgatggcacaagattgctggtgtttggtgga
atggtggagtatggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa
tggaagaaattgaaagcaaaaaacccaaagaatgggccccctccttgtcctcgtcttggc
cacagtttttccctggttggcaacaagtgctacctgtttggtggattggccaatgacagc
gaggacccaaaaaacaacattcccagatacctaaacgatctgtacacactggagcttcgt
gctggttccagtgtggttggatgggatattccaatcacctacggagttttgcctcctccc
cgtgagagccacactgctgtggtttacacagaaaagacgagcaggaaatctcgcctcata
atctatggagggatgagcggatgtcgtcttggagatctgtggacactcgatattgatacc
ctgacatggaacaaaccatcagtaagcggcacagcgccacttcccagaagtcttcactct
gccaccaccatcacaaacaagatgtatgtttttggaggatgggttcctctggtgatggat
gatgtcaaagtggccacacatgagaaagagtggaagtgcacaaacactctagcctgccta
aatctggattccatgtgttgggagacagtgttgatggatactctggaagacaatatcccc
agagcccgtgcgggccactgtgctgtggccatcaattccagactttatgtttggagtggc
cgtgatggttatcgtaaagcttggaacaaccaagtctgctgtaaagacctctggtacctg
gaaacagagcggccacatgcccctgccagggtgcagttagtccgtgccaacacaaactcg
ctggaggttagctggggtgcagtctctactgctgacacctacttattgcagctacagaag
tatgacatcccagcaactccagctgcagcctcacctgtcatgagcgcaaccccttctcag
cctgtgaactctccaaggagccctgccctggctgtagcagcaccctctgctcagagcctg
ccacagacagctattttgaaagttgcagcccagcaatctgcaacaggcacatctgttgtc
acagtccgccccagccagcctgggaaatcccctatcactttgacatctcttcctccaggt
gtccgaatggtagtgccagcccagaccactcaaggatcggtacgcaaacaatttgcaacg
catcttgtcccaattggcagtagtcctcagatgagtggcatggcagctttagctgcagca
gccgcagcaacacagaagatccctccctcctctgcaggcaccttactcaatgttcctgcg
ggtgccaccattctcaaaacagtagccgtttcccctggcacaaccacagtgaaaatggcc
tctcccctcatggtcagtaacccggccacccggatgctgaagactgctgcagctcaggtg
ggcacagcaactgcgtcctctcccaccaccaaccgacccatcatcactgtgcacaagtct
ggtgcagtcacagtagcccagcaggcccaggtggtaaccactgttgtgggaggagtcact
aagaccatcaccctggtcaagagtcccctcaccatgggcagcggtggcactctgatctcc
aaccttggcaagatgatgtctgtggtacaaaccaagccagtgcagacagctatctctggc
cagggttcaactaaccctctcgcacagctcatacagacaaagggtcccctcccagcaggc
accatcctgaagcttgtgacctctgctgacggcaagcccacaaccatcatcaccacttcc
caggctggaggcacaggacacaagcccactatcctcaacattagcggcgtctctcccacc
actaagcagggcaccaccatcattaagactatccccatgtcggccatcatgagccagtcc
ggagccacaggcgtgacaagcagtgcaggcatgaaaacgcctatcacaattctgaccacg
aaggtgatgacgactggaactcccggtaaaatcatcactgccgtgcccaaacttgctact
gcagccggccagcagggactgacacaggtggttttgaagggggcccccggacaaccagga
accattttgcgtactgtgcccatgagcacagtgggtggtgttcgacttgtaacacctgtg
acagtgtctgctgtgaagcccactgtcacaactctggttgtgaaggggactactggtgtc
accactcttggaacagtcactggcaccgtctccagcagcctggcaggaggcacggtggac
agttccaaagcctctctagtcacccccatcaccacgctaggaaccatctcgaccctgtcc
agccaggtcatcagcccagctgccataactgtgtcagctgctcagaccagcctgacctct
gcctccactctggcctcctctaccatcacagtgcagaaccagccaacccaggtgacttta
atcacaactccgagtggagtagaagctcaaccagtgcaggatctaccggtttccatcctg
gcttcaccaacctccgagcagcccagttccactgaggctggagcagctggagagggatct
gggaccgtcaccctggtctgctccaacccaccctgtgaaacccacgagacaggaaccacc
aacacagccaccacctcctcggccacaattggagctggacaagtctgctccaacccacct
tgtgagacccatgaaaccggaaccaccaacacagccaccacctcctctgctacgattgga
gccaggcaggtctgttctaacccaccatgcgagacccatgaaacgggaaccaccaacaca
gccacaactgcatcctcaaacatgtctgcgctccgtatgtgctccaacccaccatgcgag
acccacgaaactgggacaactaacacagctaccacagcatccgctaacatgggtgggtcc
cagcaggtgtgctccaatccaccctgtgagacccacgtgacaggaaccaccaacacagcc
actcaggcatcgtctaacatgaacgcaggccagacaggcaccgtgcagagggtgtgctcc
aacccaccctgcgaaacccatgagacagggaccaccaacaccccatctacagcaacctcc
agtatgggaggcgaccagaccaacacagcaacagggacggtccagagggtgtgctccaac
ccaccctgtgaaacacacgagactgggaccaccaacacagccaccactgccacctgcagc
atggagacaggcgaaggcacagcagcccagcagacagaggaaggaactgaaggtaccagc
agcacagaagtggcctctaccactgcagcaacaggcgtagccaccgccggcgtagccgcc
gccaccgccaccgcagccgccaccaccaccacccagggcagggccatcactactgtcact
cagtctacaccagccccagggccctctgtaccatcaatttcatcaatcacagagggtgtg
agtactgccgccagctctacagaggaaccaatgcaaactaatgaggcagtatcagcagaa
gctgcaccagcagaggagggagctactgctatggagacacaagcagaaggagaagcagca
gcgacagatttgaacctgccctcagagctgatgtctgagggtcagggagctacacttatg
gtgacagggctgtcggacgaggagctggctgtgaccgcagcagcagaggccgctgctcag
gcagcagccactgaagaagcccaggccctcgctatccaggctgtcctccaggcagctcag
caagctgtaatgcatgaaggcgattcggctggagagagccagcagcccacaaacatcccc
atcatgctgacccagcaggagctcgcagctctggtacaacagcagcagcagctgcaggag
gctcaggctgcagcccagcaggccaccgttgatgcaagcttacctactgaaggcctcgcc
cctgccgacagcctcaacgacccctctgtcgagagcaacggacacaacgagatggctgcc
gcagtcaccagtgctgtagcatctctgctgccacgtactactgctgagacacttgctcca
tcaagcacctttgcaccctctgtgtcggtggcaagtccagccaagctgcaagcagcagct
gctctagcagaagtcgccaatggcatagagggagagaagcaagctcctcagccaacccca
gtgaaaccagttgtaaagaaagagaatcagtggtttgatgttggaatcgtaaaagtgaca
aatatggttgtcacccacttctatgtgccagcagatgattctcatggagatgatgactct
ggtgtcatgccagactacagccagatgaagaaaatggagttgcagcctggaacagcttat
aagttccgtgttgctggaatcaacgcttgcggtcgcggagcgttctcagagatttcagct
ttcaagacttgcttaccaggcttcccaggtgccccttgcgccatcaaaatcagcaagagc
ccagatggtgcccacctgacctgggagccaccctctgtgacatcagggaagatcatcgaa
tactccgtgtatcttgccatccagagcaaccagacagctgaagccaaggcctccacccca
gcccagctagccttcatgcgggtgtactgtggacccaacccgtcgtgcttggtgcagtcg
tccagcctctccaacgcccacatcgactacaccaccaagcctgccatcatcttccgcatc
gccgcccgcaacgagaagggctatggtcctgccacgcaagttcgatggctgcaagaatct
ggcaaagatgctgcctcagcaaaaccggcccccaaaagaccaggcacctctcctgatact
aaggctactggtccaaagaaagcaaggacggaccagtga
DBGET
integrated database retrieval system