KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117761096
Entry
117761096         CDS       T07778                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein rab7 isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04137  Mitophagy - animal
hhip04140  Autophagy - animal
hhip04144  Endocytosis
hhip04145  Phagosome
hhip04148  Efferocytosis
hhip05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117761096 (si:dkey-13a21.4)
   04145 Phagosome
    117761096 (si:dkey-13a21.4)
   04140 Autophagy - animal
    117761096 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    117761096 (si:dkey-13a21.4)
   04148 Efferocytosis
    117761096 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117761096 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hhip04131]
    117761096 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hhip04147]
    117761096 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:hhip04031]
    117761096 (si:dkey-13a21.4)
Membrane trafficking [BR:hhip04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    117761096 (si:dkey-13a21.4)
Exosome [BR:hhip04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117761096 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   117761096 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   117761096 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   117761096 (si:dkey-13a21.4)
GTP-binding proteins [BR:hhip04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    117761096 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA GTP_EFTU PduV-EutP Septin AAA_24 AAA_16 AAA_5 AAA_22 IIGP
Other DBs
NCBI-GeneID: 117761096
NCBI-ProteinID: XP_034440601
LinkDB
Position
5:23424857..23429791
AA seq 204 aa
MSEGKAGVTVKVVLIGNSGVGKSSFTNRYVNHRFTNMYRATIGTDFLSKTVNIDGATVTL
QLWDTAGTERFQSLGTPLYRGAHCCMLVFDVTSKASFSALELWRKEFLFQAEPQDPADFP
FIVMGNKSDLGDREVSCRMAKQWCEEIGANYFEGSAKEDVGVEKPFLRAAQIGLQQYKKH
TLENTGHFQITCKQPTETRNTCEC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgagcgaagggaaagcgggtgtaactgtgaaagtggtcctcataggaaactctggggtg
ggtaaatcctccttcacgaacagatatgtgaatcaccgcttcaccaacatgtaccgggcc
acaataggaactgacttcctctctaagacggtgaacatagatggagccacagtcactctg
cagctgtgggacacagccggaacagagaggttccagtctctgggtacacctctgtacaga
ggagctcactgctgcatgctggtcttcgatgtcacgtccaaagccagtttctctgccctg
gagctttggaggaaggagttcctgttccaggccgagccccaggacccagctgacttccct
tttattgttatgggcaacaagagtgacctgggtgaccgggaggtgtcttgcaggatggct
aagcagtggtgtgaggaaatcggagcaaactactttgaagggagcgccaaagaagatgtg
ggcgtagagaagccgtttttgagagcggctcagatcggactacaacagtacaaaaaacac
acattggaaaatacaggacatttccagataacctgcaaacagccgacagaaactcgcaac
acctgtgagtgctga

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