Hippoglossus hippoglossus (Atlantic halibut): 117761192
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Entry
117761192 CDS
T07778
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117761192 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117761192 (nelfcd)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
117761192 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
117761192
NCBI-ProteinID:
XP_034440774
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All DBs
Position
5:17065021..17071815
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AA seq
579 aa
AA seq
DB search
MEEEYYSTAGDWEGTDGNSDGVYVEGENDGKIQEDCLQKFTSRDYIMEPAIFNTLKTYFL
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQE
EQGGSAVRRIGQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVGYIRRCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGDHDPVAEFISHCKSNFIMIN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagtattacagcactgccggagactgggagggcacggacggcaactcggac
ggcgtttatgttgaaggggaaaatgacgggaaaatccaggaagattgtctgcagaaattc
accagcagggactacatcatggagcctgcgatcttcaacaccctcaaaacgtatttcctg
gccggtggctctccagaacacgtcatccaacttctctccgaaaactactctgcggtggct
cagaccgttaacctgctggcagagtggctcatccagatgggtgtcgagcctgctcaggtc
caagagcgagtagaaaaccacctcaagagtctcctgataaaacactttgacccccagaaa
gcagattccattttcactgttgagggagagactccggcctggctcgagcagatgattgca
cacaccacgtggagagatctcttctacaagctggcagaggctcatccagactgtctgatg
ctcaacttcactgtaaagcttatttcagacgctggttaccagggtgagatcaccagcgtg
tctacagcgtgtcagcagctggaggttttctcccgagtactgaggacgtctttggcgacg
ctgctggatggaggagaagaaaacctggagaagaatctgccggagtttgctaagatggtg
tgtcacggagagcacacgtacctcttcgcccaggcgatgatgtccatcctggctcaggag
gaacagggcggttcggccgttcgtaggatcggccaggaggtgcagaagtccgcacacgag
agaggtcacgatgccagtcagattaccctcgcgctcggtacagcagcagcctaccctcga
gcgtgtcaagcactgggtgccatgttgtcgaaaggagccctgaaccctgcagacatcaca
gttctgttcaagatgttcagcagcatggaccctcctcctgtggagctgatcagagtgcct
gcctttctggacctgttcatgcagtcactgtttaagcctgggtcaaagatcaaccaggac
cataaacacaaatacatccacatcctggcctacgctgctagtgtggtggagacgtggaaa
aagaacaagcgagtcaacatcaacaaagatgagctcaagtcgacgtctaaggccatagag
accgtgcacaacctgtgctgcaatgagaacaaaggagccacagagctggtggccgaactc
ggcactttgtaccagtgcattaggtttccagtcgttgccatgggcgttttaaagtgggtg
gactggacggtgtctgagccgcggtactttcagctccagactgaccacactccagtgcat
ctagctctgctggacgagatctgtacgtgtcatcagctgctgcatccacaggtattacag
ctgctcatcaaactgtttgagacggagcactctcagctggacgtcatggagcagctggag
ctgaagaagactctgctggaccgaatggttcatctgctgagtcgtggctacgtgctgcct
gtagtcggttatattcgaaggtgtctggagaaactcaacacggatatttccctcattaga
tactttgtcaccgaggttctggatgtgatcgcgcctccctacacatcagacttcgttcag
ctcttcctgcccatcctggagaacgacagcatcgcagggacgatccgcacggagggagac
cacgaccccgtcgccgagtttatttctcattgcaaatcaaacttcatcatgattaactga
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