Hippoglossus hippoglossus (Atlantic halibut): 117761255
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Entry
117761255 CDS
T07778
Name
(RefSeq) eukaryotic translation initiation factor 4B-like isoform X1
KO
K03258
translation initiation factor 4B
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117761255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117761255
03012 Translation factors [BR:
hhip03012
]
117761255
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117761255
mRNA cycle factors
Stress granule specific factors
117761255
Translation factors [BR:
hhip03012
]
Eukaryotic type
Initiation factors
eIF-4
117761255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
117761255
NCBI-ProteinID:
XP_034440855
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Position
5:complement(18881882..18892019)
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AA seq
684 aa
AA seq
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MAASAKKKNKKGKTLTLTDFLAEDNSGGNNNPAPPSYPAKSTSWADETDDLEGDVSTSWH
TDEESYRSSIDRSVLPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYEVTEESIKDFFRG
LAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALSLNEENLGNRRIRVDIADQSNDKE
RDSGMGGRDRGGRMADLGPDKTDSDWRARPSSDDDGPPKRDDSFGPPKRDDAFGPPKRDD
AFGPPKSDAFGERSRDRYESDRFRDGPRRDGDRFEGGRDRYRDRYDDRDRRDYDRGGFDS
RGGSGGSRRAFGTGFRRDYDDNRGSGDRFGDKDRYGDRDDKYEKREERRDDRAPVQRPKL
NLMPRSMPKEEEAGGGGGGSGGGGSGGGGGGGGGGGGGGGTSSAAAPSSGSRTSSIFGAA
KPVDTAAKEREVEERLKKEEERLQRQLEEDKGRGPDRKMRDRDPSWRNEESHTERSRTGS
ESSQPGSTSGRGSRCGDNDRSGENEVFSAREGEPSSPGPPSRPPSTSSSKEPLKVMPAPP
PKENAWAKRGVVNTGSSDGEGQPPVSPVSPSGSAPPKLSSSSSADERESVKDENKADGVR
RDRGPPRARGGPAGPGAGRGRGQGPNRDRRTEADRKDNRRDRESRPPPEPKKYEETPTPK
FSSASKYAALLMDGDQGDDAEVVE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcagctaagaagaagaataagaaggggaagaccctcactctgactgacttc
ctggcagaggacaacagcggaggcaataacaaccctgcgccgcccagctacccggcaaag
tcaactagctgggctgatgagactgacgacctggaaggagatgtctcgacttcgtggcac
acagatgaggagtcataccggtcatcaattgaccgctccgtcctgcccacagcacctcgc
tcagcccgtgaacccaacgtcgaccggtctcgactgccccgtagcccgccgtacacagcc
ttcctgggcaacctgccctatgaagtcaccgaagagtcaatcaaagatttcttccgcggc
ttggcaatcagtgcagtgcgtctgcctcgagagcccagtaacccagagaggctgaagggc
tttggttatgctgaatttgacgatgtggattcccttttaagggccctcagtctcaatgag
gagaacttggggaaccgaaggattcgtgtggatattgcagaccagtcgaatgataaagag
agagacagtggaatgggaggccgcgacaggggtggacggatggcggacctgggtcctgat
aagacggacagtgactggagagctcggccaagttcagatgatgatggaccccccaagaga
gatgattcctttggaccccccaagagagatgatgcctttggaccccccaagagagatgat
gcctttggacctcccaagagtgatgcctttggagagagatcacgggaccgctacgagtcg
gatcgtttcagagatggaccacggcgtgacggtgatcgttttgaaggaggaagagaccgc
taccgggatcgttatgatgacagggaccgcagagactacgacagaggtggttttgactct
cgtggtggtagtggaggtagtcgtcgtgcctttggcaccggcttccgccgtgactatgat
gacaatcggggtagcggtgatcgttttggggacaaggatcgttatggcgaccgtgatgac
aagtacgagaaacgggaggagaggcgtgacgacagagctcctgtgcagagacccaagctg
aaccttatgccccgcagtatgcccaaggaggaggaagctggtggtggcggcggcggtagt
ggtggtggcggtagtggtggtggtggtggcggcggtggcggtggtggtggcggtggaggt
acttcctccgctgctgctccaagctccggcagcaggacctcatccatctttggcgctgcc
aagcctgttgacacagctgctaaggaaagggaggtagaggagaggctgaagaaggaggaa
gaacgactgcagaggcagctggaggaggacaaaggccggggacccgacagaaaaatgcga
gacagagacccaagctggcgcaatgaggaatctcatactgagcgatctcgcacaggaagt
gagtcttcacagccaggaagcacttctggaagagggtctcggtgtggagataatgatcgc
tctggcgagaatgaggttttcagtgcgagagaaggtgaaccctcctcccccgggccaccc
tcacgccccccctctaccagctcctccaaggagcccctgaaggtgatgcctgcacctcct
cccaaggagaacgcctgggccaagagaggtgtcgtcaacacaggctctagtgacggggaa
ggacaacctccagtctctcctgtctccccaagtggatcagctcctcccaagctcagctcc
tcaagttctgcggatgaaagagaatctgtaaaggatgagaacaaggctgacggtgtgcgt
cgggaccgtgggcccccgcgggcaagaggggggcctgcagggcctggagcagggcggggc
cgtggacaggggccaaacagagaccgaagaacggaggcagacagaaaggataacagaaga
gaccgagaatccagaccacctccagagccaaagaaatacgaagaaaccccaacccctaaa
ttcagctcagccagtaagtacgccgctttgctaatggacggagaccagggagatgatgcc
gaggtcgttgaatag
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