Hippoglossus hippoglossus (Atlantic halibut): 117761342
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Entry
117761342 CDS
T07778
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117761342 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117761342 (smarcd1)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117761342 (smarcd1)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117761342 (smarcd1)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117761342 (smarcd1)
PBAF complex
117761342 (smarcd1)
GBAF(ncBAF) complex
117761342 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
117761342
NCBI-ProteinID:
XP_034441039
LinkDB
All DBs
Position
5:complement(8013726..8027963)
Genome browser
AA seq
515 aa
AA seq
DB search
MAARGGFQTAPTGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPVYGNSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggcggcttccagactgcacctacgggtggtggcggcggagcgatggga
cctggaccaccggtaccgggcgcgggaccaggcatggggcccgggactccttcgggaagg
atgggcccgtcttcggccgcgcagaaccacatgtaccgctccccgatgcccgggcctgga
tacccgagaccgggcatgcctccctccagccgtatgacccctcagggaccagccatgggc
cccccagtatacggcaacagccctgtttctcgccctgggatgcctggtgtcatggacccg
tctcgtaagaggccagccccccagcagattcagcaggttcagcagcagcagaaccgcaac
cagcacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactg
gtcccagagtctcaggcttatatggatctgctggcttttgagaggaagctggaccagacc
atcatgcgcaaaaggctggacatccaagaggccctcaagaggcccatcaagcaaaagagg
aagcttcggatcttcatatcgaacaccttcaaccctgcgaagccggatgctgaggatgga
gaaggcacagttgcatcgtgggagctgcgtgttgaagggcgtctgctggaagatacagcc
gtgtccaagtatgaagccaccaaacagaaaaggaagttttcttctttcttcaagtccctg
gtgattgagttggacaaggacctttatggaccagataatcaccttgtggaatggcacagg
accgccaccacccaggagactgatggtttccaggtgaagaggccaggtgatgtgggtgtt
cgctgcaccgtcctcctcatgctggactaccagccccctcaattcaagctggacccccgg
ctggctcgtatgctgggtatccacacccagaccagacctgttatcattcaggccctttgg
cagtacgtcaagacccacaaactccaggaccctcatgagcgcgagttcatcaactgtgac
aagtacctgcagcagatttttgagacccagagaatgaagttctccgagatcccgcagcgc
ttgcatgcactgctgatgcctccagagcccatcatcatcaaccatgtgatcagtgtggac
cctaatgaccaaaagaagactgcttgctatgacattgatgtggaagtggacgacacactg
aagacccagatgaactccttcctgctctccactgccagtcagcaggaaatcgcaggactg
gacaacaagatccatgaaaccattgagaccatcaaccagctgaagacccagagagagttc
atgctgagttttgccagagatcctcagggctttatcaacgattggctgcagtcccagtgc
agagacctcaagaccatgactgatgtggtaggaaacccagaagaagagcgtcgggctgag
ttttactaccagccgtgggctcaggaggccgtctgtcgctacttctactccaaggtccag
cagagacgacaggagctggagcaggcgctcggcatcaggaacacctaa
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