Hippoglossus hippoglossus (Atlantic halibut): 117761466
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Entry
117761466 CDS
T07778
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117761466 (tmf1)
Membrane trafficking [BR:
hhip04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117761466 (tmf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
KAAG1
Motif
Other DBs
NCBI-GeneID:
117761466
NCBI-ProteinID:
XP_034441275
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All DBs
Position
5:complement(22107489..22119278)
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AA seq
1158 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIKEEDQWGDMTVMPYDDVTLPGKLSLSGGWG
MTQWETSPEEKTTTPPPSSEAITTPVTRTVVDESENFFSAFLLAVDEQDATQTQVVSVAP
AKSQRRPRVKGKKKKEAGIQKDFESQKSTSTDESDEDQTVAESQSFESESSPEAPHADTI
LLQPVSPVSSSSDLPCNPDCKTSGVKTNIGSTVSLDPKTEQPQLPSEQQVEQDTIDSSEP
SAVTSELKSSTPTDSSPPPSAKEVLMEHKDSKVEDRQNDTPSPPVSAFSSGTSTTSDIEV
LDHESVLSESSASSRQETGEGKAALHLMQGSFQLLTASTCGDFPRLEDYPKLTESCGSSS
DAFERIDSFSMQSLDSRSVSEVNSDDDIPSSRTLASVTAGPASLTVESAVCQKQEDGMVD
KVGDEEDEEGFTETAREQSLDEMEESGRSATPVNCEHPEELVEQDRGSEATVTLSELFSN
AEKLIIPPITEEMRSVSTVQILEFQKVIDELSGRLEKRESQLLAVSKDKARLEEDCDNLK
DEVISLKEESSTVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLREELSTRLNSSD
TMEIIREKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTKTIKHQRKIKEQEEE
LRQLQQFLEGKEELEKQHRENIKKLNSVVERQERELSRLQSDSDELQEKTRSVQAALDNS
YKELAELHKTNASRASKAEVAALSRDTQAKEQLSLVLEKAQDEARMQQEALANQVADLRM
ALQRAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLG
GQTASWEKLENNISDRLANAQAQLAVAVEKERSATEELLSIKSQLASLDSQNSLLRQEKA
RFMAQLDAEKNKREKLEDDSSREHVELENLRGEHSRMLEETKKEKLLLANQLEMEKMKVE
QEKKKCYLAQESLKEKERKALTHSVGEPPASSTPSLSRSSSISAADNAGLHTSLLSQDDP
SDYSLSTMAMSVSMSGTNLYEAARLSGGSSIMENLQSQLKLREGEIAQLQLEISSLERSR
SVMSEELVRLTNLNDEMDEKVMEIPKLKVQLKELEQRHNTILQMYGEKAEEAEELRLDLE
DVKNMYKIQIDELLKNQK
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcttctcacctgtccagcttcgccaaacaggcgttaacaacagct
cagaagtccatcgaccgtgttctggacattaaagaagaggaccaatggggtgacatgact
gtgatgccctatgatgatgttaccttgcctggaaagctgtcgttaagtggaggatggggg
atgacgcagtgggaaacatcccctgaagagaagaccaccactccgcctccctcctctgag
gccatcaccacgcctgtcacccgcacagttgtggatgaatcagaaaactttttcagtgcc
tttctgttagctgtagatgaacaagatgccacccaaacccaggtcgtgtctgtcgctcct
gctaagtcccaaaggcgccctcgggtgaagggaaagaaaaagaaagaggctgggatccag
aaagacttcgagagtcagaagtcaacatccactgatgagagtgatgaggatcaaacagtt
gctgaaagccagtcgtttgagtccgagtcttcaccagaagcccctcatgcagacaccatc
ctcctgcagccagtttctcctgtttcttcttccagtgatcttccttgtaaccctgactgc
aaaacgagtggtgtaaaaacaaatattggttcaacagtttctctcgatccaaaaacagag
cagccacagctgccatcagaacagcaggttgagcaggataccattgactcctctgaacct
tctgctgtcacttccgaactaaagagctctacacccactgattcttcgccccctccatcc
gctaaggaggtactcatggagcataaagactcaaaggttgaggaccgtcaaaacgatacc
ccgtcccctcctgtaagtgctttttcctcaggaacctctaccaccagtgacattgaagtg
ctcgatcacgagagtgtgttgagtgagagctcagccagctccagacaagaaacgggtgag
ggtaaggctgcccttcacttaatgcagggctctttccagcttctcactgcctccacttgt
ggagattttccccgactggaggactaccccaaactcacagagagctgcggttcctcctca
gacgcattcgaacgcatcgattcattcagtatgcagtcactggatagccggagtgtcagc
gaggtcaactcagacgatgacatccccagcagtcggacactagcgtctgtcactgcaggc
cctgcttctctaacagtggaatcagctgtttgtcagaagcaggaagatggaatggtggac
aaggtaggagatgaggaagacgaggagggattcactgaaacggcgagggagcagtcgctg
gatgagatggaggagagtggacggagtgcaacgcctgtgaattgtgagcatcctgaagag
ttagtggagcaggatcgaggatctgaggcaaccgtcacactgtcggagctcttctccaac
gctgaaaaactgatcattccaccaatcacagaggagatgagaagtgtctcaacagttcag
atattggagtttcaaaaggtcattgatgagctgtcaggccgccttgagaagagagagtct
cagctgctggcagtcagcaaagacaaggccaggctggaggaggactgtgacaatctcaaa
gatgaagtgataagcctcaaggaggaaagctccactgtgcagtctctaaaggatgagttc
acccagcgcatcgcagatgctgagaggaaggctcagctggcctgcaaagagagagatata
gccaagaaggagataaagggcttgcgagaagagctttctacgaggctgaactccagcgac
acaatggagattatcagggagaaggaggagcagatcagaggtctgctggaagagggtgag
aagttatccaagcagcagctgcagcacagtaacatcatcaagaagctgcgtgtgaaggag
aaggagagcgacacaaagaccatcaagcaccagaggaaaatcaaggagcaggaggaagag
ctcaggcagctccagcagtttctagaagggaaggaggagctggagaaacagcacagggaa
aacatcaagaagctgaattctgtggtggagcggcaggagagggagctgagcaggctgcag
tcagactctgatgagctgcaggaaaaaacccgaagcgtacaggctgctctggacaactct
tataaggagcttgcagaactccacaagacgaatgccagcagagccagcaaggctgaagta
gcagccctgagcagggacacgcaggcgaaggagcagctgagtctggttcttgagaaagcc
caggatgaggccaggatgcaacaggaggccctggccaaccaggtggctgacctgaggatg
gctctgcaaagggcggagcagcagcaggcaaggaaagaagattatttgagggaggagatc
agtgagcttcaacagaggctccaggaggcggagaccaggaaccaggagctcagtcagagt
gttacctcggcaacacggccccttctacgacagattgagaacctacaggcctcattgggc
ggacaaacagcatcttgggaaaaactggagaataacatttctgatagactagccaatgct
caggcacagctggctgttgccgtggagaaggagcgttccgcaacggaggaactgttgtcc
atcaagtcccagctggcctctctggattcccagaattctttgctgcgccaggagaaagcc
cgcttcatggcacaacttgatgctgagaagaacaagagagagaaactggaggatgacagc
agcagggagcatgttgaattggaaaatctgcgaggagaacacagtcggatgctggaagag
accaagaaggaaaagctgctgctggccaatcagctagaaatggagaagatgaaggtggag
caagagaagaagaaatgctacttggctcaagagtcactcaaggaaaaggagcggaaggct
ttgacccactctgtcggagagccccctgcatcctccacaccctccctgtcccgctccagc
tccatcagtgcggcggacaatgctggtctgcacacgtctcttctttcccaggatgaccct
tcagactactcattaagcaccatggccatgtctgtgtccatgagcggaaccaacctgtat
gaggccgccaggctgtcgggaggctccagcatcatggagaacctccagtctcagctcaaa
ctgagagaaggagagatcgctcagctacagcttgaaatctctagtctggagaggagtcgc
tccgtgatgtcagaagagctggttcgactcaccaatctcaacgacgagatggatgagaag
gtgatggagatccccaagttgaaggttcagctcaaggaactggagcagaggcacaacact
atcctgcagatgtacggagaaaaggctgaagaggcagaggagctgagactggaccttgaa
gatgtgaagaacatgtacaagatccagattgatgaactgctgaagaaccagaaataa
DBGET
integrated database retrieval system
