Hippoglossus hippoglossus (Atlantic halibut): 117761482
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Entry
117761482 CDS
T07778
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00260
Glycine, serine and threonine metabolism
hhip00630
Glyoxylate and dicarboxylate metabolism
hhip00670
One carbon pool by folate
hhip01100
Metabolic pathways
hhip01200
Carbon metabolism
hhip01230
Biosynthesis of amino acids
hhip01240
Biosynthesis of cofactors
hhip04981
Folate transport and metabolism
Module
hhip_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117761482 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117761482 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117761482 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117761482 (shmt2)
Enzymes [BR:
hhip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117761482 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
117761482
NCBI-ProteinID:
XP_034441299
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Position
5:complement(9529998..9551253)
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AA seq
501 aa
AA seq
DB search
MLSFTLRRLTRPLCHRAPLLASVRGQQSHAATHTANEDRPWTGQDSLAQDDPEMWYLLQK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKR
ALEAFDLDPSLWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNIATGLIDYEQLELTAKLFRPKLIIAGTSAYARLIDYARIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFEYADLVSTTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALKQANSPMFKEYIAQVLKNSKTMAT
ALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELASITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEGDFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETVARIA
DLRHRVEAFARPFPMPGFDDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcacgctgaggcggctcacacggcctctgtgccacagagcccctcttctt
gccagtgtacgtgggcagcagtcccacgctgccactcataccgcgaatgaagatcgtcca
tggacaggccaggatagcctggcccaggacgaccctgagatgtggtatcttctgcagaaa
gagaaggacaggcagtgccgaggcttggagctcattgcgtctgagaatttctgcagccga
gcagctctggaagctcagggctcctgtctgaacaacaaatactctgaaggctacccaggg
aaaagatactatggcggagcagaagtggtcgaccaaattgagcttctgtgtcagaagcga
gccctggaggcctttgacctggacccatctctgtggggtgtcaacgttcagccatactca
ggctcacccgctaactttgccgtctacacggccgtcctcaacccccacgaccgcatcatg
ggcctggacctgcccgacggaggacatctgacccatggctacatgtctgacgtaaagagg
atctcagcaacctcgatctattttgagtccatgccatacaagctaaacattgcaacagga
ctcatagactacgagcagttggagttgacggccaagctgttccgacccaagctcatcatc
gctggcaccagcgcctatgcccgcctcattgactacgcccgcatcaagaagctgtgtact
gacatcaaggcctacatgcttgctgacatggcccacatcagcggtctggtagcagccaaa
gccatcccctctccctttgaatacgctgacttggtctcgactaccacacacaaatccctc
cgtggagccagggctggcctcatcttctaccgtaagggcgtccgctcagtggacaagaag
gggaaggagatcatgtatgacctcgaggacaaggtcaacttctctgtcttcccctcgctg
cagggtggacctcacaaccacgctatcgctggtgtggctgtggcactcaaacaggctaat
tctcccatgttcaaggagtatattgcccaggtgttgaagaattctaagacaatggccaca
gctcttctcagtaaaggctacaccctggtatcaggcgggaccgagaaccacctggtcctc
gtggacctgcggcctaagggcatcgacggagctcgagccgagagggtgctggagctcgcg
tccatcactgccaataagaacacctgccccggggacaagagcgccctgactcctggtggc
ctcaggctaggtgctccagccttgacatccaggcagttcaaagaaggagactttgtacaa
gtggtggagttcatggacgagggctttaagattgcgttggatgttaagaaaaagacagga
aagctccaagacttcaagaactttcttctccaggacccagagactgtggctcgcatcgct
gacctacgccaccgcgttgaagcttttgccaggcccttccccatgccaggcttcgacgac
cattag
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