Hippoglossus hippoglossus (Atlantic halibut): 117761561
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Entry
117761561 CDS
T07778
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
hhip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117761561
03015 mRNA surveillance pathway
117761561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117761561
Enzymes [BR:
hhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117761561
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117761561
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
PP-binding
Motif
Other DBs
NCBI-GeneID:
117761561
NCBI-ProteinID:
XP_034441466
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All DBs
Position
5:18553852..18560787
Genome browser
AA seq
486 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGNLHIKEKPEENGTAAHVTEATPAAAKTEGEVKSTDDDVK
DDKAAQSLLNKLIRSNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMGFN
RPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPSNRYPQCLCVSPTYE
LALQTGKVIEQMGKHYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCSKFKFIDP
KKIMVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPDPN
VIKLKREEETLDTIKQYYVLCNCKEEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAGEL
SREGHQVALLSGEMQVEQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVD
KDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIDKLDTDDLDE
IERIAG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcccaggcggtggatgaacaagaagccgcggcggaatcgatc
ggcaacctccacattaaagagaaaccagaagaaaatggcaccgcagcacacgtaacagag
gcgacccccgcagctgcaaagacagaaggtgaagtcaagtcaacagatgacgatgtcaaa
gatgacaaagcggcccaatcgttgttgaacaagctgatcaggagtaatctagtcaacaat
acaaaccaagtggaagttcttcagaaagatccaaactctccactctactctgtcaagtct
tttgaggagttgcgactcaaacctcagctgcttcagggcgtgtacggcatgggtttcaat
cggccatctaaaatccaggaaactgccttacctatgatgctggctgaacctccacagaat
ctcattgcccagtcgcagtcgggaacagggaaaacggctgcctttgtcctggccatgctc
agccacgtcgaccccagcaacagatatccccagtgcctgtgtgtgtcacccacctatgaa
ctggcacttcagactggtaaggtgatcgagcagatgggcaaacactatcctgaggtcaaa
ctagtctacgccatcagaggaaataaattgcaacgtggcatgaagttgcaggaacagata
gttattggcacacctggtacgatgctggactggtgcagtaagttcaagttcatagacccc
aagaagatcatggtgtttgtgctggacgaggctgacgtcatgatcgccacccagggtcac
caggaccagagtatccgcatacagaggatgctgcctaaaaactgccaaatgttgctgttt
tcggccacatttgaagaaacggtgtggaatttcgcccagcgcattgtgcctgaccccaac
gtcatcaaactgaagagggaggaggagacgctggacaccatcaaacagtactacgtgctg
tgcaactgcaaagaagagaagttccatgccctctgtaacatctacggagccatcactatc
gcccaggccatgatcttctgccacactaggaagactgcaggctggctggcaggtgagctg
tctagagaaggacaccaggtggcgctgctcagtggggaaatgcaggttgagcagagggct
gctgtcattgatcgcttcagggagggcaaggagaaggtcctggttacgacaaacgtttgt
gctcgaggcattgatgtggagcaggtttctgtggtgatcaactttgacttaccagtggac
aaggacgggaacccagacaacgagacctacttgcacaggattggccgcacaggtcgattt
ggcaaacggggcctggcgatcaacatggtggacagcaagatgagcatgaacatcctcaac
aggatccaggagcatttcaataagaaaattgacaaactagacacagacgatctggatgaa
attgagagaatcgccggctaa
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