Hippoglossus hippoglossus (Atlantic halibut): 117761685
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Entry
117761685 CDS
T07778
Symbol
cdh4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117761685 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117761685 (cdh4)
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Major cadherins
117761685 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Stevor
ECSCR
DUF5527
Motif
Other DBs
NCBI-GeneID:
117761685
NCBI-ProteinID:
XP_034441677
LinkDB
All DBs
Position
5:complement(22701097..22904125)
Genome browser
AA seq
928 aa
AA seq
DB search
MNVGCVILACTLLVGASSGNKAGQPLKPPCRPGFSQNFYTVIVSRDVLHGQSILKDTTLS
SERVKFEDCQRSREVGFVSSDPNFSVRPDGEVYAEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHPHSLQLTKVGIEEMLSRMWESQPRVIKFSRRHQRGSSANGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFHNQVYNGSVAEGSKP
GSSVMQVTATDADDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVVVTN
LTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNDGMLTVIKPVDFEMNRAFMLTV
VVSNQAHLATGIQSSLQSTAGVTISIQDVNEPPVFPVNPKMIRFEEGVPAGTTLTVFAAQ
DPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVKNNVYEATFLAFDNGK
SGSPQASGTGTLQIYLIDVNDNAPVLIPREAQVCERARPNSRINITASDADADPNVGPFV
FELPSFPATVRRNWTISRLSGDYAQLRLRIPYLEASVYEIPVIVSDSGNPPLSNRSVIRV
KVCPCDDNGDCSTTGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQAKPL
LIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIINKPAGVRRVDERPVITES
QYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSS
GDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttggctgcgtcatcctggcgtgcaccttacttgtgggcgcatcctcggggaat
aaggccggccagccactcaaacccccgtgcagaccgggcttctcccagaacttctacaca
gtgattgtctcgagagacgtgctgcatggccagagcattctcaaagacaccaccctttcg
agtgaacgggtgaagtttgaggattgccagcgcagcagagaggtgggctttgtcagcagc
gaccccaatttcagtgtgagacctgacggggaggtgtatgcagagcaggaagtggccaac
ctgtcagagcccgtccagttcatggtgacggcccgggggctccatgacccccacatctgg
gagaccaccgttaagctggccttggctggacacccccattctctacaacttacaaaggtt
ggcatcgaagaaatgttgtcaagaatgtgggaatcccaacccagagttatcaagttttct
cgaagacatcagagaggctcctccgccaacgggctgaggcgacagaagagagactgggtc
atcccgcctatcaatgtgcctgaaaactccagaggccccttccctcacatgcttgtcaga
atccgctcagatcaggataaggatgtcggcatccgctacagcatcacaggagcgggagcc
gatcagcccccgagtggcatctacaacatagatcccatcagcggcaacatgtttgtcacc
caacccctggacagagaggagagagcctccttccatctgcgagcgcatgcagtggacatg
aacggtaaccaggtggagaatccaatcgatctgtacatctacgtgatcgacatgaacgac
aacaggcctgagtttcataaccaggtgtacaatggctctgtggctgaaggctccaaacca
ggctcgtctgtgatgcaggtgacagccaccgacgcggacgactccaccacagcaaacggc
atggtccgctaccgaatcctctctcagacaccccacagccccatccccaacatgttcacc
atcaacagtgagactggagacattgtgacagtggcagccggcctggacagagagaaagtg
tctcagtacaccatcatcgtccaggccacagacatggagggcaacttgaactttggtttg
tccaacacagccacagctctgatctccatcactgacatcaatgacaatcccccagaactg
acagtcaggacgttttctggagaggtgccagagaacaaggtgaacgtggtggtgaccaac
ctgacggtggtggacagggatcagccccacagccccaactggaacgctgtctaccgcatc
gtcagcggcgacccctctgggcacttcaccatccgcaccaaccccatcaccaacgatggc
atgctgacagtgatcaagccggtggatttcgaaatgaaccgtgccttcatgctgaccgtg
gtggtgtctaaccaggcccacctggccaccggcattcagtcctccctccagtccactgcg
ggagtcaccatctcaattcaggacgtgaacgagcctcccgtcttccctgtcaaccccaag
atgatccgctttgaggagggcgtgcccgcagggaccactctgacagtgtttgctgctcaa
gaccccgaccacttcatccaccagatcgttaggtactccaagctgtcagacccagcgaac
tggctgaagatcaacaggaccaacggtcagatcaccaccatggcgctcctggaccgagag
tccatgtacgtcaaaaacaacgtgtacgaggccacgttcctggcattcgacaatggtaag
tctggctcgcctcaagccagcgggacaggaaccctccagatctacctgatcgacgtcaac
gacaacgctccggtgctgataccccgggaggcccaggtgtgcgagcgtgcgcgccccaac
tccaggatcaacatcacggcttcagacgcggacgccgaccccaacgtggggccctttgtc
ttcgagctgccttcttttcctgccaccgttcgccgcaactggaccatttcaaggctgagt
ggcgactacgctcagctcaggctgaggattccttacctggaggcgagtgtgtacgagatc
cccgtcatcgtgtccgactcggggaaccctcctctgtccaaccgctccgtgatcagagtc
aaagtgtgtccctgtgacgataacggagactgcagcaccacaggggccgtggcagccgct
ggactcggcaccggggccatcatcgctatactcatctgcatcatcatactgctcagcatg
gttctgctgtttgtggtgtggatgaagcgcagagagaaggagcggcaggcaaagcccctg
ttgatcgaccccgaggatgatgtcagagacaacatcctcaagtacgatgaggagggagga
ggagaggaggaccaggactacgacctgagccagctgcagcagcccgagtctctggaccac
atcatcaacaagccggcgggggtgcgcagggtggacgagaggcctgtgatcactgagtct
cagtacccggtcagacccagtctgcctcaccccggagacatcggggacttcattaatgat
ggtctgagggcagcagacaacgaccccacggctcctccctatgactccctgctggtgttc
gactacgagggcagcggttcgactgccggctccgtcagctcgctcaactccaccagctct
ggggaccaggactacgactacctcaacgactgggggcctcgcttcaagaagctggccgac
ctctacggtggaggcgacgatgactga
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