Hippoglossus hippoglossus (Atlantic halibut): 117761711
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Entry
117761711 CDS
T07778
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117761711 (toporsa)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117761711 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117761711 (toporsa)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117761711 (toporsa)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117761711 (toporsa)
UBL E3 ligases
117761711 (toporsa)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117761711 (toporsa)
Cilium and associated proteins [BR:
hhip03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117761711 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117761711
NCBI-ProteinID:
XP_034441787
LinkDB
All DBs
Position
1:19356346..19361035
Genome browser
AA seq
797 aa
AA seq
DB search
MSAIKIALQQSQKSSRRKTSEAMSADVSPDSKCPICLDMFNNISYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHTIKSEQDFKKYDLQPVNNGSFGSFGGVRFRYRTTLTGVHR
SMSGRTSPPPDNGVMFEASTIPPQQPQDRYVRRMMMRLAAKRKAASEGRAVNSVREQEMV
NFRRELYRQGVRVRTVRDGGRSRDTSAEFYRTNPACLHRLIPWVKRELSVLYGSHGSLVN
IVQHIIMSRITRFDMEDGAIQEELRPFIQGRTEHFLHEFINFAKSPFHLEAYDQHAVYDC
PAASSNEDSSSNSSVIAISEDEELTMDLDPPGETLSTLRDSVWDDETPGPSYSTTAEQSR
AEHLSVIDSDSDTSLEEETREFDASPLQMHPHNKTDMTRGEVNKQEGLSPDDCVIVGFVK
PTVERTPELVQLSSDSDEFDCEDTEEVPRLPQHIRFSSASPPALQSCDPRGAGQSENVEM
DHSHQFDSKVICSSPTSSRHKTSRKSDRKDRDGGSDGDERSRERHCSKDRDQRRRRRSSS
RERRHNSGRLVISQSSVNTLSRGRDYPYNSGRDSKLDCSSKRRDQERNDSGTHYTERRSY
YYSSHKYSDRYTYSRSRSHSRDSVRRDRRHSRSFSSSRSPSAKSKSHHDKPGGKRKYKTR
HLEEPSKNTLSNSGCEGDASAPLTKHKKKSKEKHRKKSKERSRKTSRSLSVELINEEHAH
ERSKRHHKKKKKHKKKSKKHRSDERTEKRSPTIITIDSDSDSFANDVVTQACSTNKDNAI
DSITDDPVDPTALTSLS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatcaagattgccctgcagcagagccagaagagtagcaggaggaaaacctct
gaagccatgtcagcagatgtgtcgccagactccaagtgtcccatctgcttggacatgttt
aacaacatttcgtacctggacctctgcctgcacaaattctgtttccgttgtattcatgag
tggtccaagaacaaagcagagtgccctttatgcaaacagccgtttaattcaatctatcac
actataaaatcagagcaagactttaaaaagtatgacttgcagccagtgaacaatggctcc
tttggttcttttgggggggtgcggtttagataccgcacaactctcactggagtccaccga
tcgatgagtggaaggacctcgccacctccagacaatggagtaatgttcgaagcctcaaca
atccctccccaacaacctcaggaccgttacgtccgacgcatgatgatgaggctggcggcc
aagcggaaagctgcgagtgaaggtagagcagtgaacagcgtccgagaacaggaaatggtt
aacttcaggagggagctgtatcggcaaggagttagggtccggactgttcgggatggcggc
cgctcgcgagacacctcagctgagttctacagaacaaatcctgcctgcctacatagactg
atcccctgggtaaagagagaactcagtgtgctgtatgggtcccacggttctttggtaaac
atagttcagcacatcatcatgtcacgcattacacgtttcgacatggaagatggagctatt
caggaagagctcaggccattcatccaggggcgcacagagcactttctgcatgagttcatc
aactttgcaaaatcccccttccatttggaggcatatgaccagcatgctgtgtacgactgc
ccagccgcttcctcgaatgaagacagcagctccaactcatctgtgatagcaatttcagag
gacgaggaactcacaatggatttggatcccccgggagaaaccctgtctactctgagggac
tctgtgtgggatgatgagactcctggaccttcatattctacgacagcagagcagagccgg
gcagagcatctgtcagtcatcgactcagactctgacaccagcttagaggaggagacacga
gagtttgatgcttctccactgcaaatgcacccccataacaaaacagacatgactcggggt
gaagttaacaaacaagagggtttgtctcctgacgactgtgtcatcgtaggctttgtcaag
cccacagtagagaggactcctgagctggttcagctctcctcagactctgatgagtttgac
tgtgaagatacagaggaagtgcctcgtttacctcaacacatccgcttctccagtgccagt
cctcctgctttgcagagctgtgatccaagaggtgctggacagtcagagaatgtagaaatg
gaccacagtcatcagtttgattcaaaagtaatatgtagctcgccgacatctagcagacac
aagacatccaggaagtcagacagaaaagatagagatggaggttctgatggtgatgagagg
tccagggagcgacactgttcaaaggacagagaccagaggagaagaaggaggtcaagtagt
agagagcgcaggcacaacagcgggaggctggtgatctcccagagcagcgtcaacacgctc
tccaggggaagagattatccttacaacagcggcagagactcaaaattggactgtagttct
aaaaggagagaccaggagagaaatgacagtgggacgcattatacagagaggcggtcttac
tattacagtagtcacaaatactcagataggtacacatactctcgctccaggagccacagc
agagactcagtgagacgggataggaggcattcaagatctttttccagcagtcgctctcct
tcagcaaaaagtaaatcccaccatgacaagcctggtggaaagagaaagtacaaaacaaga
catttggaggagccatctaaaaacacgctttccaactctggctgtgaaggagacgcctcc
gcaccattaacaaaacacaagaaaaagagcaaagagaagcatcggaaaaaatccaaagag
aggtcgagaaagacgagcaggagcttgagtgttgagctcatcaatgaggaacacgcacac
gagcgaagcaaacggcatcacaaaaaaaagaagaaacacaagaaaaaaagcaaaaagcac
aggagtgatgagcgcacggagaagcgatcgcccaccatcatcaccattgacagtgacagt
gattcttttgctaatgacgttgttacccaggcctgcagcactaataaagacaatgctatt
gacagtatcacagatgacccagttgaccccaccgctctgacctctctgtcataa
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integrated database retrieval system
