Hippoglossus hippoglossus (Atlantic halibut): 117761737
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Entry
117761737 CDS
T07778
Symbol
cntn4
Name
(RefSeq) contactin-4 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117761737 (cntn4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hhip00537
]
117761737 (cntn4)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
Contactins
117761737 (cntn4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hhip00537
]
Others
117761737 (cntn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
Ig_C17orf99
Ig_5
Tissue_fac
Pur_ac_phosph_N
C2-set_2
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
117761737
NCBI-ProteinID:
XP_034441808
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All DBs
Position
5:25447286..25601121
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AA seq
1029 aa
AA seq
DB search
MMLLWKLLVLQSLMGCLAETSVLQSPAFSKQPGSIVYPVETLERNREVVFSCEAQGSPPP
MYRWKLNGTEISPKSGSHYSLSGGNLRINRLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLEDFKTHRRSSVSVREGQGVVLLCGPPPHSGDLIFSWIFNEYPTFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNSVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVVH
VSKGSTVKLECFALGNPVPSINWRRVDGVPFPRKVDMRKASGVLEIPYFQQEDAGTYECV
AENSRGMNTVKGKLSFYAPPHLIEKPEDVQKLIDDSLVWECKATGKPKPSYRWMKNGENL
DSAEERIQVANGALTISRLTLSDTGMYQCVAGNKHGEVFSNTELRVIAVAPDFSHNQLRS
QTLVKVGGDVLIECRPKMSPWGGISWRKGSEPLRDNNRVSILENGNLRVWNATKSDAGLY
TCVARNQFGVASSTGSVTVKEPTIITTQPSTLDITVGESVVLPCQVNHDPSLELKFTWFF
NEQLIHFGNHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLVVRG
PPGPPTSIQVEEISDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGN
RLTATVIDLSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTSPKVTSANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVVAFRPHGATGWMQAAVPSAEASKYVFKNESIQPFSPFHV
KVGVYNNEGEGPFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVTWKALPWNASKKRVL
GYELRYWNRSEREDTASVQRTVGNQTSTIIHGVKGSTTYYISVRAYNTAGTGPPSAAVNV
TTKKPPPSQPPVKVMWNTSNSKIILNWEQVKALENESEVTGYKVLYKKNRHSRPSVMETN
TTSVELALPTDEDYIIQIRPFGEGGEGSSSRQFTIPRIPGPNAVGSASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcagtcacttatggggtgccttgcagagacc
agtgtcctgcagagtcccgccttcagcaagcagcccggcagcatcgtgtatcctgtggaa
acgctggagaggaacagggaggtggtgttcagctgcgaagcccagggaagcccacctccc
atgtaccggtggaaactgaacggtacagaaatcagtcccaaatctggatctcactacagc
ctctctggaggcaacctcagaatcaaccgtctcaacaaggaccaggacgctggaacgtat
cagtgcctcgcctccaactcctttgggaccatcgtgagccgagaggccagtctcaccttt
gcatacttggaagacttcaagacccacagaaggagctctgtatcggtgcgtgaaggtcaa
ggagtggttctgctgtgtggccctccaccgcactccggagatctgatattttcctggatc
ttcaatgaatacccaacatttgtgaagcaggacacgcgtcgcttcatctcacaggagacg
gggaatctgtacatcgccaaggtggagccctcagatgtcggaaactacacctgtgtggtg
accaactccgtcacaaagaccagagtccagggtccacccactcctctggtgctccgcagt
gatggtgtgatgggtgaatatgagccaaagattgaagttcagtttccagaggtggttcac
gtctccaaaggatccaccgtcaagctggaatgcttcgctctgggaaacccagttccctct
ataaactggaggagagtggacggcgtaccgttccccaggaaggtggacatgaggaaagcc
agcggtgtcctggagatcccgtacttccagcaggaggatgcgggcacttacgagtgtgtg
gccgagaactccagaggaatgaacacagtgaaaggaaagctctctttctacgccccccct
catctcattgaaaaacctgaagatgtgcagaagctcattgatgactcgctggtgtgggag
tgtaaagccacagggaagccgaagccttcttacaggtggatgaaaaatggagagaacctg
gattctgctgaggagcgcatacaggtcgccaatggggcattgacaatcagccgcctcacc
ctgtccgacacggggatgtaccagtgtgtggctgggaacaagcacggcgaggtcttctcc
aacacagagctacgagttatagccgttgccccagatttctctcacaatcaactgaggagc
cagacgctggtgaaggtaggaggagatgtgctcatcgagtgcaggccgaagatgtctcct
tggggtgggatctcttggcggaagggcagcgaaccactccgagacaataacagggtctcc
attctggaaaacgggaaccttcgggtatggaacgcaaccaaatccgatgcaggcctctac
acttgtgtggcgagaaaccagtttggcgtggcgagcagcacagggagcgtcacagttaaa
gagccgactatcatcaccacccagccgtccacgctggacatcaccgtgggggagagcgtg
gtcctgccctgtcaagtgaatcacgacccgtctctggagctcaagttcacctggttcttc
aacgagcagctcatccactttgggaaccatggtggattttttgaaaaagtgggaggtcag
cattcagcaggagacattatgattcggaacatccagctgaggcatgctgggaagtacacg
tgcgccgtgcaaacgaaggtggacagtatttccatcgccgttgacttggtcgtcagaggt
cccccggggcctcccaccagcatccaagtagaagaaatcagcgataccacagcttctctg
tcctggaggcctggtcctgataatcacagtccaattacggcatatacaatccaggccagg
acaccattttccctcgggtggcaggctgtcaccacagttcctgaggtggtggggggcaac
cggctgacagctacagtaatagacctgagcccttgggtggagtatgagtttcgagttctg
gcaagcaacaccatcgggaccggcgagcccagcaagccatccaaacaagcaaggacgaag
gggacctctccgaaggtcacatcggctaatgtgagcggaggcggtggcagtcgctccgaa
ttagtcatcacatgggagcctgttccagaggagctgcagaacggcccagggtttggctat
gttgttgctttccgaccccacggtgcaacgggatggatgcaggcggccgtgccgtcggcc
gaggcgtccaaatacgtctttaaaaacgagagcatccagcccttctcgcctttccatgtt
aaggtcggggtttacaacaacgagggggaagggccctttggacccgttaccactatctac
tctgctgaagaagagcctggccgggcgcccaccagggttcgtgccaagagcctctccgcg
tccgaaattgaagtaacgtggaaagctctgccctggaacgccagcaagaagagagtgctg
ggctacgagctgaggtactggaatagaagtgaaagggaggacacggccagcgtgcaaagg
acggtgggaaatcaaacctctactattatccacggggtgaaaggcagcaccacatattac
atctcagtgagggcgtataacactgctggaacagggcctcccagcgccgctgtcaacgtt
accactaaaaaaccaccacccagtcagccaccagttaaagtcatgtggaacacatcaaac
tccaagattatattgaactgggagcaggtcaaagccctggagaatgagtcagaggtcact
ggttacaaagtgctctacaagaagaaccgacacagccggcccagtgtcatggaaaccaat
accacgtccgtggagctcgccctgcccactgatgaggattatatcatccagataagacca
tttggagagggaggggaaggcagcagtagcaggcagttcaccatcccaaggataccaggc
cccaacgcagtcggctcagcgtccaaggtctccactctgtcagcgctcagtacaatagcg
ctgtctttcacagctcggacatctttatga
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