Hippoglossus hippoglossus (Atlantic halibut): 117761774
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Entry
117761774 CDS
T07778
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117761774 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117761774 (pbrm1)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117761774 (pbrm1)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117761774 (pbrm1)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
117761774 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117761774
NCBI-ProteinID:
XP_034441885
LinkDB
All DBs
Position
5:14758377..14772044
Genome browser
AA seq
1574 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDLDDNQTAALVSSIGRKRRRTANIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQPDYYNVVSQPIDMMKIQQKLKMEEYDDVEQITSDFQLL
FNNAKRYYKSDSPEYRAACKLWDLYLRTKNEFIQRGDYDDDDDDGYDAQDNPAGTTEDES
APSCLKEILEQLLDTVVSYTEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIIAQKI
QLGQYRSVSVMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFTQKKSEMEHGEPIKSSI
RIRNRRTAQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAESMTSNMDMSNPIFQLY
EAVRGARNSQGQLISEPFLQLPSRKDYPDYYHQISQPICLHQIKNKMKSNEYESVEHIDS
DVTLMFENAKRYNVPHSSIYKRALKLQHIQQIKRKELLQRDDDDGDSMLSSATSDTSSTK
RKSHKKNTKKNRMKTLLAAVTEAREASTARRLCDLFMFKPSKKDYPDYYKVILEPMDLRT
IEHNIRSDKYMTEDSMLEDMKLMFRNARHYNEEGSQVYNDADILEKIMKDRRKDLGPATD
DDDMMSPKLKIRKNSITLKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRA
ELPDYYIAIKKPVDMEKIKTHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDALM
LHRVLLETRRDLEGGDDAHVPDVPRLIQELIRSLFVSVLSHQDDEGRCYSDSLAEIPALD
PANPEKPPLNFDIIRKNVDRGRYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQF
LIRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKEMLPKEFEEDKIKREEEKREAEKR
EDSVGGSWQSNLQRTYSQDCSFKDSMYHVGEYVYVEPAEPNLQPHIIYIERLWQDDTGEK
WLYGCWFYRPNETFHLATRKFLEKEVFKSDFYNKAPISKILGKCVVMFVKEYFKLHPEGF
RTDDVYVCESRYSAKSKSFKKIKMWTMPLSSVRFVPREVPLPVVRVASMFATKQEEKPPE
TADESKMIDGIVDKEREDVTMDMSNGEPGCQYYEQLCYNNFWLKVGDCVYIGSHGLVRHR
VGRIEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCIIGKCIV
SSFKDYLSMRPTEVPEENVLLCESRYIDCEKQMKKFKGLKRFSLSGKVVEDETYYFRKLI
VPQKEPSPLLDKKIEELEAKFADMTDEELEDLGDDDGELGERSLPQMQSPLSSDMDTIPY
TPPQATPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKARNPDFSFGELSRLVGTEWR
NLESSKKAEYEERAAKVAEQQERDRAHHQTSPRAGTPVGALMGVVPPPTPMGMLKTSMTL
VSGVNGGHGNMHGSQMGSGQQAPPPYPGQGQPALQQPSTPVFVSPPAKSQRLLHSEAYLR
YIEGLTAESSTISKWDQALSAQKQDVRLTKEQESRLPSHWLKSKGAHKTMADALWRLRDL
MLRDTLNIRQTHNL
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaaggagacgggcgacatccccttctagcagtgtgagtggaggagatctt
gacgataaccaaactgccgcgttagtgtcttcaattgggcgaaagaggagaaggaccgca
aacataccaactgtggatcctattgctgtatgtcatgagctgtacaacacaatcagagat
tacaaggatgaccagggcaggatgttgtgtgagctgttcatcagagccccgaaacgaagg
aatcaaccagactactacaatgtggtgtctcagccgattgacatgatgaaaatccagcag
aaattaaagatggaggagtacgatgacgttgaacaaatcaccagtgactttcagctgttg
tttaataacgctaaaagatattacaagtccgacagtcctgagtacagggcagcctgtaaa
ctgtgggacctctacttgcggaccaagaatgaatttattcagagaggagattatgatgac
gatgatgatgatgggtacgatgcacaagacaaccctgcaggcaccaccgaggacgagagt
gcaccttcctgtttgaaagagatcctcgagcagctccttgacactgtggtgtcttacact
gagccgactggacgtctggtcagcgagctgttccagaagcttccctccaaaatgcaatac
ccagattattacgccatcatcaaggaaccaatcgatctgaaaataatcgctcaaaaaatt
cagttgggccagtacaggagtgtcagcgtcatggctaaagacatcgatttgctggtgaaa
aatgccaaaacctataatgagcctgggtcacaggtgtttaaggatgcaaacaccattaaa
aagatttttacacaaaagaagtctgagatggaacatggagaaccaatcaagtccagcatt
cgcatcaggaatagaaggacagcacaaggagaccgcctctcagctatcaccatggctctg
cagtatgaaagcgatgaggaaggcattctctctgggtccgttcactatgacgagggggag
tccgaggccgagagtatgacctcgaacatggacatgagcaacccgatcttccagctgtat
gaagctgtgcgaggtgcgaggaacagccagggtcaactgatctctgagcccttcctgcag
ctgccctccaggaaggactacccggactactaccaccagattagccaacccatttgtctc
catcagatcaagaacaagatgaagagcaatgaatatgagagcgtggagcacattgactct
gacgtgacgctcatgttcgagaacgccaaacgttacaatgtccctcactcctccatctac
aagcgtgcgctcaagctccagcacatccagcagattaagagaaaggaacttttacagaga
gatgatgatgatggagacagcatgctctcctctgccacgtctgacaccagtagtacaaaa
agaaaaagtcacaagaagaatacaaagaaaaaccggatgaaaactcttttagccgcggtg
actgaagcgcgagaagccagcaccgctcgaagactgtgtgaccttttcatgttcaagccc
tcgaaaaaggactaccccgactactacaaggtcattctggaaccaatggacctcaggacc
atcgagcacaacattcgctcagataagtacatgactgaagattcaatgctggaagatatg
aagctgatgttccgcaatgcacggcactacaatgaggaaggctcccaggtctacaatgat
gctgacatcttagagaagattatgaaagacagacgcaaggatcttgggccagcgactgat
gacgatgacatgatgtcgccaaagttgaaaataagaaagaatagtattactttgaagaag
tccaagtatctaacacccttacagcaaaagctgaatgagctttatgaggctgtgaagaac
tacacagataagcggggccgtcgtctcagcaccatcttcctgcggctgccgtctcgtgcc
gagctgcctgactactacatagccatcaagaaacctgtggacatggagaagatcaagacc
cacatgttggctaataagtaccaagatgtggacgcgctggtagaggacttggtgctcatg
ttcaacaacgcctgtacttacaacgaacccgaatctctgatttaccgcgacgccctgatg
ctgcacagggtgctgttggagacgaggcgtgacctggagggtggagacgacgcccacgtg
cctgatgtgccccgactcatccaggaacttatccgcagcctctttgtttctgtgctcagt
caccaggacgacgagggccgatgctacagtgactcacttgcggaaatccccgcccttgat
cctgccaaccctgagaagccaccactcaattttgacatcatcaggaagaatgtagaccga
gggcgttacaagaggttggacgtttttcaggatcacatgtttgaagtgttggaaaaagcc
agacgattgaataggaccgactctgagatctttgaagatgctgtggagcttcagcagttc
ctaatccgcatcagagatgagctgtgtaagaatggagagatcttgatgtctcctgctctc
agctacacctccaaacatctgcacagtgatgtggaaaaggagaagaaagagatgctaccc
aaggagttcgaggaggacaaaatcaagagggaagaagagaaaagggaagcggagaagagg
gaggactctgttggcggatcatggcagtccaacctgcagcgcacatacagtcaggactgc
agctttaaggacagtatgtaccatgtgggagaatatgtgtatgtggagcctgcagaaccc
aacctccagccccatatcatctacattgaacgcctgtggcaagatgacactggtgagaag
tggctgtatggctgctggttctacaggccaaacgaaacctttcatcttgctactagaaag
ttcttagagaaggaagtctttaagagcgacttttacaacaaagctcccatcagcaagatt
ctgggcaagtgtgtggtcatgtttgtgaaggagtacttcaaacttcacccagagggcttc
aggacagatgatgtgtatgtttgcgagtcgcgctactcggccaaatccaagtccttcaag
aagatcaagatgtggacgatgcccctgagctcggttcggtttgttcctagagaggtaccc
ctccctgtagtccgtgtggcgtccatgtttgccaccaaacaagaggagaaaccaccagag
actgctgatgaaagcaaaatgatagatggtattgttgacaaggagagggaggatgttaca
atggatatgagcaatggggagccagggtgtcagtactatgagcagctctgctacaacaac
ttctggctcaaagtgggagactgtgtctacattggatctcatggactagtgcgccaccgt
gtgggcaggattgagaaaatgtggatgcgcgatggagcaggctacttctttggacccatt
ttcattcatccagaagaaaccgagcatgagcccactaagatgttctacaaaaaggaagtg
ttcctcagcaacctggaggagagttgtcccatgacttgcatcatagggaagtgcatagtg
tcatccttcaaagactacctgtcaatgcggccaactgaagtgccagaagagaacgtcctg
ctctgtgagagccgctacattgactgtgagaagcagatgaagaaattcaagggactcaag
cgcttttcactctctgggaaggtggtggaggatgaaacctactattttagaaagctcatt
gtgccccagaaggagccatcacctctgctggacaagaaaatagaggaactggaggctaag
tttgctgacatgactgatgaggagctggaggatcttggggatgatgatggagagcttggg
gaacggtctcttcctcagatgcaatctcccttgtctagtgacatggataccataccttac
actcctccacaggctacgccaaaatccataaaaggcctctcaaagaaggaaggctcaaag
cggaagatcaacatgagcggttacatcctgttcagcagtgagatgcgagcggtcatcaaa
gccaggaacccagacttctcctttggggagctgagccggctcgttggaacagagtggagg
aacctggagagttccaagaaagcagagtatgaagagcgagcagctaaagtggccgagcag
caggagcgtgacagggcccatcatcagacgtcccctagagcaggtaccccagtaggggca
ctgatgggggtggtgcctcccccaacccctatggggatgctaaaaaccagcatgacgctt
gtgtcaggtgtcaatggtggacatggaaacatgcatggatcccagatgggctcagggcag
caagctccaccaccgtatccaggacaaggccaacctgcactccagcaaccgtccacccca
gtgtttgtgtccccaccagccaagtctcagcggctgctccactcggaggcgtacctcaga
tacatcgagggccttactgcagaatcctccaccattagcaagtgggaccaagccctctca
gctcaaaaacaagacgtgcgcctgacaaaagagcaggagagcagactgccatcccactgg
ctgaagagcaagggcgcccacaagacaatggcagatgccctttggcgactgcgtgacctg
atgctgcgagacaccctgaacattcgtcagacgcacaacctgtag
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integrated database retrieval system
