Hippoglossus hippoglossus (Atlantic halibut): 117761779
Help
Entry
117761779 CDS
T07778
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117761779 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117761779 (usp4)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117761779 (usp4)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117761779 (usp4)
Ubiquitin system [BR:
hhip04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117761779 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
DLIC
Motif
Other DBs
NCBI-GeneID:
117761779
NCBI-ProteinID:
XP_034441896
LinkDB
All DBs
Position
5:complement(15136954..15149851)
Genome browser
AA seq
1042 aa
AA seq
DB search
MMAEGGGPESGGAADSDSEPVAAQMPTPSTESQKQTIGSLLKTTLRKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERSLYPGPIDNSGLFSDQETQSLKEHLIDELDYVLVPTEAWNK
LVGWYACLECQRPIARKVVEHGMFVKHCKVEVYLLELNLCENDNMDNLVTRHFSKADTID
TIEKEMRMLFHIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGT
WPRQASHPKSSTTPSRNFTTSPKLSSNSSASISSTVANGDSSCSPEYTLNNSTSSGNRLG
SYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDHYEAEINR
ENPLGMRGEIAEAYADLVKQMWMSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAEGRQDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSQPTQYRVVVPKLGTVTDLCSA
LSKLCGIPSENMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVQEEDSERMNLPVYF
REHHTKHAGSSTSTMLFGQPLLITVPRHNLIADVLYDKILERIGRYVKRSQSPSTESRAS
ASASASASASASASASASASASASASASASASASATFASCSQAAECSTSSGLNAGLGGCG
SPLSDGASCSASSSNGSNHSGNCNETNGLYDGEEEAMDHQVSPEPENGQSEEDEEETSDL
ENGPKGDAAKLCPSPAKLFTFSIVNSYGTANISPLPCDGNVLKLNPHSTVAIDWDTESKK
LCYDEQEAEAYEKHESMLQPQKKKATVALRECIELFTTMETLGEHDPWYCPTCKKHQQAT
KKFDLWSLPQVLVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFVCDPKAGPYIYDLVA
VSNHYGGMGGGHYTAYGKNKVDGKWYYFDDSSVSSASEDQIVTKAAYVLFYQRRDEEAPS
KPQPSASLGGAPEAAEDHMDTN
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgagggaggcggacccgagtcgggcggcgcggcagactcggactcggagccg
gtagccgctcaaatgccaaccccgtcaacagagagccagaaacagaccattggctcccta
ctgaaaacgactctgcgaaagggcgacgagtggtatctaatagacagccggtggttcaaa
caatggaagaagtatgtgggatttgacagctgggacatgtacaatgttggcgaacgaagc
ctctatccaggaccaattgataactctggactgttttcagaccaggagactcagtccctg
aaagagcaccttatagatgagctggactatgtccttgtacccactgaggcatggaataag
cttgtcggctggtatgcctgccttgagtgtcagagacccatcgccaggaaggtggttgag
catggcatgtttgtcaagcactgtaaggtggaggtctatctgttggagctgaatctgtgt
gagaatgacaacatggacaatctggtcacacgccatttcagtaaagctgatactatagat
actatagagaaggagatgaggatgctgttccatatcccatcagagaaggagacacgactc
tggaacaaatacatgagcaacacctatgagcagctgaacaagccagacagcactgtacag
gacgctggtctcttccaggggcaggtgcttgtgattgagcgcaagaatgaagatggcacg
tggcccagacaagcctcccatcccaaatccagtacaaccccatctaggaactttactacc
tccccaaaactctcctcaaactcatcggccagtatctcgtcaacagtagccaacggagac
agcagctgtagccctgaatatacactcaataacagcacctcatctggcaacagattgggc
agctacaattcctacagctcctcctacaactacagagagtcccagtcacagcccggcctg
tgtggtctcagtaatttgggcaacacatgcttcatgaactctgccctccagtgcctgagc
aacgcatccccactcacagagtacttcctcaacgaccattacgaggcagagattaaccga
gagaatcctctgggaatgaggggtgagatagccgaggcctacgctgatctagtaaagcag
atgtggatgagtcgcagcagctacgtggccccacgtaccttcaaaacccaggttggacgc
tttgccccccagttttcaggctaccagcagcaggactcacaggagctgttggctttcctg
ctagacgggctccacgaggatctgaaccgtgtcaagaagaagccttatctggccctgagg
gatgcagagggccgtcaagatgagatcgttgccaaggaagcctggacaaaccaccgttta
cgcaatgactccatcattgttgatattttccatggcctcttcaaatccactttggtgtgc
ccagagtgctccaaggtgtctgtcaccttcgacccattctgctacctcacactgcctctg
ccgatgaagaaggaccgcaccatggaggttttcctggtgcgatcagatcctcagtctcaa
cccacgcagtatcgagtggtggtccccaaactgggtacagtgacagacctgtgcagcgcc
ttgtccaaactctgcggcatcccttcagaaaatatggtggtggcggatgtttacaatcac
aggtttcataaaatctatcgacgggatgatggcctcaaccagatcatggaaaaggacgac
atctttgtgtatgaggtacaggaggaggacagtgagaggatgaacctgcctgtatatttc
agggagcaccacaccaagcatgctggaagctccacaagcaccatgctgtttggccagcct
ttactcatcaccgtgcccagacacaacctcatagcagatgttctatatgacaagatccta
gagagaattgggcgctatgtaaagcggtcccagagccccagcactgaaagcagggcctcg
gcctcggcatcagcatcagcatcagcatcagcatcagcatcagcctcagcctcagcatca
gcctcagcctcagcatcggcctcagcatcggcctcagcctcagccaccttcgccagctgc
agtcaggctgctgaatgttctacatcgtctggtctcaatgccggcctgggcggctgtggc
agccccctgtcggatggagcctcctgcagtgccagctctagcaacggcagcaaccactca
gggaactgcaacgagactaatgggctgtatgatggtgaggaggaggccatggaccaccag
gtgagcccagagccggagaatggccagtctgaagaggacgaagaggagacctctgacttg
gaaaacgggcctaaaggagacgcagccaagctgtgcccttcaccggccaagctcttcact
ttcagcatagtcaactcttacggaacagccaacatcagcccactgccttgcgatggcaat
gtcctcaaactcaatccacattccacggtggcgatcgactgggacacagagtcaaagaaa
ctgtgttacgatgaacaggaagcagaggcctacgagaagcacgagagcatgcttcagccc
cagaaaaagaaagccaccgtggctctgagggagtgcatcgaactcttcacaaccatggag
acactcggagaacatgatccatggtattgtcccacatgtaagaaacatcagcaggccaca
aaaaagtttgacctgtggtcgctgcctcaggttctggttgttcacctaaagcgtttctcc
tacaaccggtgttggcgggacaagctggacacagtggtggactttcccattcgggatctg
aacatgtcagagtttgtgtgtgaccctaaggccggaccttacatatatgacctcgttgct
gtgtcaaaccactatggaggaatgggagggggtcactacacggcatatggcaagaataaa
gtggatggaaagtggtactactttgatgacagcagtgtctcgtctgcctcggaggaccag
attgtgacaaaagcagcctacgtgctcttctatcagcgcagagacgaggaagccccttcc
aaacctcaaccttcggcctcgctgggaggagcccccgaagccgcggaagaccacatggac
acaaattga
DBGET
integrated database retrieval system
