Hippoglossus hippoglossus (Atlantic halibut): 117761904
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Entry
117761904 CDS
T07778
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117761904 (cxxc1b)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117761904 (cxxc1b)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117761904 (cxxc1b)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
117761904 (cxxc1b)
COMPASS/SET1 complex (yeast)
117761904 (cxxc1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
MutS_IV
MRP-L47
Motif
Other DBs
NCBI-GeneID:
117761904
NCBI-ProteinID:
XP_034442127
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Position
5:23491525..23499136
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AA seq
570 aa
AA seq
DB search
MDSDMSDNDPMPGPETSSMDGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCINITEKM
AKAIREWYCIKCRDKNSLLEIKYRTKKSKERDSEPDRSERVYSSPGTPDYRSERRRGSKV
KRSVRMCGECEPCKRTEDCTKCDFCKDMKKFGGPNKIRQKCRFRQCVVRARKMLRVKDEE
FSLRERRENSHHRRRRYSDDYDSEIELYQKYKSAGLEDNMAWASDDDDEPPFSPVMRKKA
VKVKHVKRREKKLDKKKESRRHKQKQKHKDRTRHSEKGELRDSGGQRQCLGPSCVEASRP
SSKYCSEECGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQLERIRREQQNARLRLTD
MERRFHELEGIITKAKQQAVQQDEEVNEGDNEDTDLQIFCVSCSHPINPKVALKHMERCY
AKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKIQVDEVCGC
PLVKNVFALTGEYCRVPKRKCNRHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAM
TNRAGLLALMLHQTIQHDPVTTDLRSSKDR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacatgtcagacaacgacccaatgccagggcctgagaccagtagtatggat
ggagagaatgcaccactctactgtatctgccggaaaccggacataaactgcttcatgatt
ggttgtgataactgcaatgaatggttccacggccactgcattaacatcacggagaagatg
gcaaaggcaatccgggaatggtactgcataaaatgcagagataaaaactctttgttggaa
ataaagtacagaacgaagaaaagcaaggagagggattctgagcctgacagatctgaaagg
gtttacagcagcccgggtacccctgactataggagtgagaggaggcgtggatcaaaagtg
aagcgttcagtccgaatgtgtggggaatgtgagccctgcaaacggactgaggactgtacc
aagtgtgacttctgcaaggacatgaaaaagtttggaggcccgaacaaaatccgacagaag
tgcaggttcaggcaatgtgtggtccgagccaggaaaatgctgcgtgtgaaggatgaggaa
ttctctttgcgggaaaggagggaaaattcccaccacagaaggagacggtactctgacgac
tacgacagtgagatagagctgtaccagaagtacaagtcagcgggacttgaagacaacatg
gcatgggccagtgatgacgatgatgagccaccattcagtcccgtcatgcgaaagaaagca
gtgaaggtgaaacacgtcaagagacgagaaaagaagttagacaaaaaaaaggagtcccgt
cgccacaaacagaagcagaagcacaaagacagaaccaggcacagtgagaagggggagtta
cgggatagcggagggcaacgtcagtgtctgggaccatcctgtgtggaggcatcaagaccc
agctccaaatactgctctgaagagtgtggcatgaaattagctgccaaccggatttatgag
atcctcccccagcgcatccagcagtggcagcagagtccctgtattgccgaggagcatggg
aagaagcagcttgagcgcatccgccgggagcagcagaacgctcggctgcgcctcaccgac
atggagcgacgcttccacgaactggagggtatcattaccaaggccaagcagcaggcggtt
cagcaggacgaggaggtgaatgaaggcgataacgaggacacagatctgcagattttctgt
gtgtcctgtagtcatcccatcaacccaaaggtggcgctgaaacatatggagagatgttat
gcaaagtacgagagtcagacctcctttggctccatgtaccctacaagaatagaaggagca
accagactcttctgtgatgtgtacaatccccagagcaaaacgtattgcaagaggcttcag
gttctgtgtccagaacattccagggatcccaagatccaagtagatgaggtgtgtggatgt
cctctggtgaagaacgtgtttgcgctgacaggagaatattgtagagtccccaaaaggaaa
tgcaacagacattacaactgggaaaagctgaggagagctgaggtggacttggagcgagtc
agggtgtggtacaagttggacgagctctttgaacaggagcgtaacgtcaggacggctatg
accaacagagctggtctcctcgctctgatgctgcatcagactattcagcacgaccccgtg
acaactgatctccgtagcagcaaggataggtag
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