Hippoglossus hippoglossus (Atlantic halibut): 117761969
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Entry
117761969 CDS
T07778
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117761969 (trub2)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117761969 (trub2)
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
117761969
NCBI-ProteinID:
XP_034442264
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Position
5:12873190..12876590
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AA seq
321 aa
AA seq
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MATPAIRMFRRLEGLFCVYKPSGVHWKLVRDNIETSLLKGLNTVPQKPCPQEVRFLAQPG
GDTETARGLTLFAASVPALSNHPLVTGPEFQHVRVGVGHRLDASSSGVLVLAVGNGNKVL
NDLYNTRVTRDYTVEGAFGSATDDFSDTGRVVERTTYDHITLDKLNRVLAMLQGANQKAM
LMYSNVDMRSQEAYEMAVQGLLGPEGKSVPIVTGLRCIHFQPPNFTLEVQCLNETQRYLR
KVVHEIGLELRSTAACTGVRRTRDGPFTLQDALTCHRWTPPGVMQAIQQYRSSKKNKRRS
QSQIKNPGLQPLEENVKESSA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccagctattcgcatgttccgcaggttggagggtttgttctgtgtctacaaa
ccttccggtgttcactggaaactcgtccgggacaacatcgagacaagtcttcttaaaggt
ttaaacactgttccccagaagccgtgtcctcaggaggttcgtttcctggctcagccgggc
ggggacacagaaacagccagaggactcaccctgtttgcagcctctgtccctgctctgtcc
aaccaccctctggtaactggacctgaattccagcatgttcgagtgggagtgggacatcgt
ctggatgcctcctcctccggagttttagttcttgcagttggaaatggaaacaaggtcctg
aacgatctctacaacacacgagtcacaagggattacaccgtggagggggcgtttgggagt
gcgacagatgatttctctgacacgggtcgtgttgtggaaagaaccacctatgatcacatc
acactggataagctgaacagagttctggcaatgctgcagggagccaatcaaaaggccatg
ttaatgtattccaacgtggacatgcgctcacaggaggcctatgagatggctgtgcaaggt
ctattgggtccggaggggaaatcggtgcctattgtgacaggcctgcgctgcattcacttc
cagcctcccaacttcacattagaggtacagtgcctaaatgaaacgcagagatatttgcgc
aaagttgtgcacgagataggacttgagctgcgcagcacggcagcgtgtacgggagtgaga
cggaccagagacggaccgttcacactgcaggacgctctgacatgtcaccgctggacgccc
cctggtgtcatgcaggccatccaacagtaccgctccagtaagaaaaacaaaagacgctcc
cagtcccagatcaagaatccaggattacaaccactggaggagaatgtgaaagagtcatcg
gcatga
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