Hippoglossus hippoglossus (Atlantic halibut): 117762106
Help
Entry
117762106 CDS
T07778
Symbol
zgc:113307
Name
(RefSeq) lumican
KO
K08121
fibromodulin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117762106 (zgc:113307)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hhip00535
]
117762106 (zgc:113307)
Proteoglycans [BR:
hhip00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
117762106 (zgc:113307)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
117762106
NCBI-ProteinID:
XP_034442458
LinkDB
All DBs
Position
5:17377573..17382797
Genome browser
AA seq
366 aa
AA seq
DB search
MALFCCAVVVLLCVVHSASATVVAETDYGGVPLWIDRMLGEPSVLSLQGRMNPAWFRANN
PQTCPEQCDCPIQWPTALYCDHRGQADIPDDLPDTTQYLFLQHNNISSLSSSVLVNITEL
RWLILDHNQLTSETLDRASLQNQTQLCYFFANNNHLTSVPDVLPAGLKQLRLAHNQISSI
RPGAFQKLHNLTLLLLQGNRLQTITEGDLRGLISLNLLHLGGNLISSLPRHLPSSIQQLY
LSNNSLSGLDNGSFTGLLKLKYLRLSHCGLQSGGVHPWVFNLSSLVELDLSYNKLTTIPT
VPSSLQYLYLEANEIQEFNMTSFCREVGPLSYSRMKILRLDGNKMSYHQMPSDLIYCLRE
LESIHI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggctctcttctgctgtgccgtggtggtgctactgtgtgttgttcactctgcttcggcc
actgttgtcgccgaaacggactacggaggggttcctctgtggattgaccgcatgctgggt
gagcccagtgttctgagcctgcaggggcggatgaacccagcctggttccgagctaacaac
ccgcagacctgccctgaacagtgtgactgccccatccagtggcccacagcgctctactgt
gaccacagaggccaggcagacatccctgacgacctgccagacacaactcagtaccttttt
ctacagcacaacaacatctcgtccctgtcctcctctgtactggtcaacattaccgagctc
cgctggctcatcctggaccacaaccagctgacgagtgagacgctggaccgggcctccctg
cagaaccagacccagctgtgctacttttttgccaacaacaaccacctgacttcagtgccc
gacgtgctaccagcaggtctcaagcagctgcgactggctcacaaccaaatcagcagcatc
aggcccggagctttccagaagctgcacaacctgacgctgctgctgctgcagggaaacaga
ctgcaaaccatcacagagggagacctcagaggtctgatcagtctgaatctgttacacctc
ggtggaaatttgatctcgtccctcccccgacatttaccttcgtccatccagcagctctat
ctgtccaataactctttatctgggctggacaacggcagtttcaccgggctcctcaagctt
aagtacctgcgtttaagtcactgtggtttgcaaagtggcggtgtccacccgtgggtcttc
aacctctccagcttggtggaattggacctttcttataacaaactcacaaccattcctaca
gttcccagcagcctgcagtacctctacctggaggccaatgaaatacaagagttcaacatg
accagtttctgcagagaggtgggacctctgtcctactccaggatgaagatcctgcgattg
gacggaaacaaaatgtcctaccatcagatgccctctgacttgatctactgcctgcgggag
cttgaaagtattcacatctga
DBGET
integrated database retrieval system
