Hippoglossus hippoglossus (Atlantic halibut): 117762179
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Entry
117762179 CDS
T07778
Symbol
rbm15b
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117762179 (rbm15b)
03041 Spliceosome [BR:
hhip03041
]
117762179 (rbm15b)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117762179 (rbm15b)
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117762179 (rbm15b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
RRM_Nup35
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117762179
NCBI-ProteinID:
XP_034442587
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Position
5:complement(868277..871212)
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AA seq
840 aa
AA seq
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MKRQAGREASPSRAAAKRTRERERESARREELPPPPLALLLAESRGYHRRSRSREREKPR
VREERAAALELHHRHELSLLGRPPLRTTAAELPAARPGTLEYKTLLISNLGSQVSDEDVE
DALFHEFKKFGDVSVKLSHTPELGRIAYVNFRQPEDAKEARHAKSSRLVLGDRQLKIEPM
YVRRRSVTPPDVGYLPLHPPYRQRSLSPPGPAVSIRDLRARHYALETLGLGRDRDRLLDY
YGMLDERGRPYGLPMPVVEDLKPEDDQRATSNLFIGNLDGNVTEVELRRGFEKYGVIEDV
VIKRPARGQGGAYAFVKFQNLDMAHRAKVAMQGRMIGGNPIKIGYGKANPTTRLWVGGIG
PGNSLAALVREFDRFGSIRNIDYVKGDSFAYIQYESLDAAQAACSQMRGFPLGGPERRLR
VDFAKVEESPSRPFPPGYQPPVVLPSSYDLLGEAFSRHRSLERELRGTRDRPSPPSHSAP
SQRERDRPVLERDYPTSPTRSLERRAGGVEAFGRSGRGARSRSRSRERWLKEREERRNRR
RSRSRSLSTDRQAGEKEKEKEKERGRSRVRGPGGVVSPDASPDRARVRAPDSTTEPRDHS
PDSGAGGRQAAINEEEPPPSRHHSKRSSSVQLNNHHHRNSEVIAASSPATHTDTHTSSSP
STLSEFAHASLSKTWHGFFALKNSSFPTELYLLEGGPAFFTAVMKETLKQQSQNQPSQLK
IAQRLRMDQTRLDEVSRRIKLGRPDGFAILLALQGPVDRQAPAPEPGLQVRLLRHLVTYL
RNKEAAGVVSLPAAKEGGPGAMLYAFPPGEFSQQYLQAAKRTVGNLDEEHMVIVIVTDTN
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcaggccgggagggaggcgagtccgtccagggccgcagccaaacggacccgg
gagagggagcgagagagcgcccggagagaggagctgccgccgccgccgctggctctgctg
ctggcggagagccggggataccaccgccgcagccggagcagggagcgagagaagccgcgg
gtcagggaggagcgggcggccgctctggagctccaccaccgacacgagctcagcctcctc
ggccgcccgccgctccgcaccacggcggccgagctgcccgcagccaggccggggaccctg
gagtacaagacgctgctcatcagcaacctgggctcgcaggtgtcggacgaggacgtggag
gacgcgctgttccacgagttcaaaaagttcggggacgtcagcgtgaagctgtcgcacacg
ccggagctgggccggatcgcatacgtcaatttccggcagccggaggacgccaaggaggcc
cggcacgccaagtcctccaggctggtgctgggggaccggcagctgaagatcgagcccatg
tacgtcaggaggcggagtgtgacgccgccggacgtcggttatttaccgctgcacccaccg
tacagacagcggtccctgtccccgccgggccccgcggtcagcatcagggacctgagagcc
agacactacgccctggagaccctgggtctgggcagggaccgggacaggctgctggactac
tacggtatgttggatgagaggggtcgaccctacggcctccccatgcccgtggtggaggat
ctgaaacccgaggacgaccagagggcgaccagcaacctgttcatcggaaacctggacggt
aacgttacagaggtggagctcaggagggggttcgagaagtacggtgtcattgaggacgtg
gtgatcaaacgtccggctcgtggacagggtggagcttatgcttttgtcaagtttcagaac
ctggacatggcccatcgagccaaagtggccatgcagggccggatgattggtggaaacccc
attaagattggttatggcaaagctaaccccaccactcgactgtgggtgggcggcatcggt
cctggaaactccctcgcggctcttgttcgggagtttgatcggtttggaagcatcaggaat
atcgactatgtcaaaggggacagttttgcttacatccagtatgaaagtctggacgctgct
caggccgcctgctcccagatgaggggttttcctttgggcggccccgagcggcgtctgagg
gtggactttgctaaagttgaggaaagcccctctcggccgtttccccctggttatcagccc
cctgtggtgctgccctccagctacgacctcctcggcgaggccttcagccgccaccgcagc
ctggagcgagagctgaggggaaccagggaccgcccgtcacctccctcccacagcgccccg
tcccagagggagagagacaggccggtgctggagagagactaccccaccagcccgacccgc
agcctggagcggagagcgggaggcgtggaagcatttgggaggagcgggagaggagcgagg
agccgcagcaggagcagggagcgatggctgaaggagagggaggagaggaggaatcggagg
aggagtcggagcaggagtctgtccactgatcggcaggcgggggagaaggagaaagagaag
gagaaggagaggggacgatcgagggttcgaggtccaggaggcgtcgtctctccagacgcg
agtccagaccgagcgagggtccgagcccccgactccaccaccgagccgagagaccactcc
cccgacagcggtgcaggaggccgccaggctgccataaacgaagaagagccaccgcccagt
cgccaccacagcaagaggtcgtccagcgtgcagctcaacaaccatcaccatcgaaacagc
gaggtcatcgctgccagctctcccgccacccacacagacacgcacacctcctcctctccg
agcacgctgtccgagttcgcccacgcctctctctccaaaacgtggcacggcttcttcgct
ctgaagaacagcagcttccccacagagctgtacctgctggagggcgggccggcattcttc
accgcggtgatgaaggagaccctgaagcagcagagccagaaccagcccagccagctgaag
attgcccagcggctccgcatggaccagacccggctggacgaggtgtcgcgccgcatcaaa
ctgggacgtcccgacgggttcgccatcctgctggccctccagggccccgtcgaccgccag
gccccggcccctgagccgggactgcaggtgcgcttgctccgccacctggtgacctacctg
cggaacaaggaggcggccggagtcgtgagcctcccggctgcgaaggagggcggtcccggg
gcgatgctgtacgccttcccccccggagagttctctcagcagtacctgcaggctgccaag
aggactgtgggtaatctggacgaggagcacatggtgattgtgatcgtcaccgacactaat
tga
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