Hippoglossus hippoglossus (Atlantic halibut): 117762180
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Entry
117762180 CDS
T07778
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5 isoform X1
KO
K04664
growth differentiation factor 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04060
Cytokine-cytokine receptor interaction
hhip04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117762180 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117762180 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
hhip04052
]
117762180 (gdf5)
Cytokines and neuropeptides [BR:
hhip04052
]
Cytokines
Transforming growth factors (RSTK binding)
117762180 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
117762180
NCBI-ProteinID:
XP_034442588
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All DBs
Position
5:935299..941636
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AA seq
708 aa
AA seq
DB search
MKLVKRLCLLLSCWTLIYLHPVLGSLSRSRPTEPHHRYRLGEAAESATGGTDGEQVPGRT
GSSTLTPGRQPGAGAWRPSPLVPARITRIRASPPLIKAELTVVKSAGTAVTSASLRSGAV
PVNRAQLQHRDRAGSLGRKEAVRSWLPGGDARSKAHAPAAFSAHAAVKGVRTADGGGGGG
SSPARHVGKAAPSAARAAGAALGVRTGDPPRGAAPVRTGDPPRGAAPVRTGDPQRGAAPV
RTGDPPRGAAPVRTGDPQRGAAPVRTGDPPRGAAPVRTGDPQRGTAPVRTGDPQRGTAPV
RTGDPPRGAFVQKQPHGQKAAPVAQRGSSYKTLKASDRETHPKQPLVIPHDYMLSLYWSL
SSGDLNSSALHEAGLANTITSFVDKGQDERGPQLRRQRYHFNISSLERDGLLGAELRILR
KRLSDPRRASMGSTGADGGRGGDGGGGSSSPCLKLYTCASGKQKAAVLQTKTTEELLGSR
WEVFDIWKLFKGLKHQQHHHSQQLCFELEALEHRGGRPMDLRTLGFARLGRTNKEKAFFL
AFGKSKKRDLFYNEIKARSGHDNKTVYEYLFTQRRMRRAPAARGAKKPLQQPQSIPQHQV
VKTRPRCNRKHLHVNFKEMGWDDWIIAPLEYNAYHCDGACDFPIRSHLEPTNHAIIQTLI
NSMDPEAAPPTCCVPTRLTPISILYIDSSNNVVYKQYEDMVVEACGCR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgtgaagcgtctttgtctcctgctgagctgctggactctcatttacctgcac
cccgtcctcggttcactcagccggagcaggccgaccgagccccaccaccggtaccggctc
ggagaggcagcggagagcgcgacaggcggcacggacggagagcaagtccccgggagaacc
ggcagttccaccctaacacccggcagacaaccgggggccggggcgtggagaccgtccccg
cttgttccggcgaggatcacgcgtatccgcgcgagtccgccgttaatcaaggctgagttg
actgttgtaaaaagcgcaggcaccgcagtgacatccgcgtccctgcgcagcggggccgtg
ccggtgaaccgtgcacagctgcagcaccgggaccgagcagggagcctggggcgcaaagag
gctgtgcgctcctggctgcccggaggagatgctcgctccaaagcgcacgctcccgcggct
tttagcgcgcatgcagctgtgaaaggagtcaggactgcggacggaggaggtggaggcggg
agctccccggctagacatgtggggaaagctgctccaagtgcagcgagagcagccggagcg
gcacttggagtgcgcaccggggatccaccgagaggagccgctccggtgcgcaccggggat
ccaccgagaggagccgctccggtccgcaccggggatccacagagaggagccgctccggtc
cgcaccggggatccaccgagaggagccgctccggtgcgcaccggggatccacagagagga
gccgctccggtgcgcaccggggatccaccgagaggagccgctccggtccgcaccggggat
ccacagagaggaaccgctccggtccgcaccggggatccacagagaggaaccgctccggtc
cgcaccggggatccaccgagaggagcctttgtgcaaaagcagccgcatggtcagaaggcg
gctccggtggcgcagcgaggatccagctacaaaaccctgaaagcgagcgaccgggagacg
catcccaagcagccgctggtgattcctcacgactacatgctgtctctgtactggtccctg
tccagcggagacctgaacagcagcgctctgcacgaagcgggtctggccaacaccatcacc
agcttcgtggataaaggacaagatgagcgcgggccccagctgaggcggcagaggtatcac
ttcaacatcagctccctggaacgagacgggctcctgggggccgagctacgcatcctgagg
aagcgcctgtctgacccccgcagagcctcaatgggatctacgggcgcagacggaggcaga
ggaggagacgggggtggaggaagctcatccccatgcctgaagctgtacacctgcgcctca
ggtaaacaaaaggctgctgtgctccagactaagaccactgaggagctgctcggcagcaga
tgggaagtgtttgacatatggaaactcttcaagggcttaaaacaccagcagcaccaccac
tcccagcagctgtgctttgaactggaggctctggagcacagaggcggccggcccatggat
ctgcgcacgctcgggttcgcacggctcggccggaccaacaaggaaaaggccttcttcttg
gcgtttggcaaaagcaagaagcgtgaccttttttacaacgagatcaaagcccggtcaggc
catgacaacaaaaccgtctacgagtacctgttcacccagagacgaatgcggcgagctcct
gctgcccggggggctaaaaagcctctgcagcagccgcagtccatcccccaacaccaggtg
gtgaagacgaggccgcgctgcaatcggaaacacctccacgtgaacttcaaggagatgggc
tgggacgactggatcatcgctccgctggagtacaacgcgtatcactgtgacggcgcctgc
gacttccccatccgctcgcacctggagccgaccaaccacgccatcatacagaccctcatc
aactccatggaccccgaggcggcgccgcccacctgctgcgtccccacgcgactcaccccc
atcagtatactctacatcgactcgtccaacaacgtggtgtacaagcagtacgaggacatg
gtggtggaggcttgtggctgcaggtag
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