Hippoglossus hippoglossus (Atlantic halibut): 117762217
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Entry
117762217 CDS
T07778
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04110
Cell cycle
hhip04218
Cellular senescence
hhip04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117762217 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117762217 (rbl1)
04218 Cellular senescence
117762217 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117762217 (rbl1)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117762217 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
117762217
NCBI-ProteinID:
XP_034442628
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All DBs
Position
5:1652936..1664528
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AA seq
1064 aa
AA seq
DB search
MRGEESSESGRMEERSIRRSLEILCQELNMDEQTAAAAMDNFTAIWDTYTLEGDVVHWLA
CSLYAACRKGSTPTVGKGLMEGNCVSLTRILRSSKLSLIQFFSKMKKWADMSNLTQNFRL
RMEQLERNFEVSTVIFRKFEPIFMDMFQNPQGAEPPRQPRSRKHRRLPCHISDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPALYRADGH
VSGDEPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLLQKRILRGNAELLTELLDPQ
NFIDNNKAINKEYEEYVLTVGDFDERVFLGADADEEIGTPRKIVQEPSASQTTNQKQLQQ
HVEKSGSLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVSGLRTAPSDHLMQIFK
SCSRDPTDSILSRVKTLGQTFKEHYTKDSEDTPGSHIDFAENRLKLAEILYYKILENVMV
PETKRLQGKDMSVLLEQDIFHCSLMGCCLEVVLFSYSSHRTFPWIISVLKLAPFYFFKVI
EVFIRSEEGLSRDMVKHLNSIEEQVLESRAWTADSALWSALQAAGSKVPTVEEVNFSSSL
DTGSGSGSGSTIGGQSHLPLVALSPIIHPRIREFRSGLGSIRKDVPPSPLSVHDRYSSPA
AGSAKRRLFGDDPPTLGLNPGLSPMSSPAKRLTFGSSGTLKIGGQVTPTTVLSFPLQGVN
NERHIALIPVQQCDSSGTVTARFLFTASPSRITAPAPTTSDPQTGSGRPRRTGSLALFFR
KAYHLASVRLRDLCARLDISSELRGKIWTCFEHALVHCTDLMKDRHLDQLLLCSVYIISK
ITKETHTFQDIMKCYRSQPQASSHVYRSVLLRHREPREQVADENMEVDPVSGGESAEKTN
PVSGEADSGQSGEEERGDLIQFYNTVFVLKMKSFALRYATHDNRADAPPLSPFPSVRAQP
LSPRRISQRHSLYVSPHKNSAGCLTPNSYTYRINSSPSKELSDINRMIRQGCVSRKRAFT
MEGDVMMPSAACDSPSKRACPENGSSPDVLLKRLQDVVSERQSR
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaggagtcgtcggagtcgggcaggatggaggagcggtcgatccggaggagt
ctggagatcctgtgtcaggagctgaacatggacgaacagaccgcggccgccgccatggac
aacttcactgccatctgggacacatacaccctggagggagacgtggtgcactggttggcc
tgttcactgtacgcagcctgcaggaagggatctactcccacggtgggtaaagggctgatg
gagggaaactgcgtctctctcaccaggatccttcgctcctccaaactcagtctgatccag
ttcttctctaagatgaagaagtgggccgacatgtccaacctcacgcagaacttccggctg
cgcatggagcagctggagcgcaacttcgaggtttccacggtgatcttccgcaagtttgag
cccatcttcatggacatgtttcagaacccacagggagccgagccgccgcgccagccacgc
agcaggaaacacaggcggctgccgtgtcacatcagtgatgtgttcaagttctgctggacg
ttgtttgtctacactaaaggtaacttccggatgatcggcgatgacctggtgaactcgtac
cacctgctgctctgctgtctggacctggtgtttggaaacgctctgctctgtgccaacagg
aaggacctgatcaacccaacgttcagaggtcttcctgctctctaccgcgctgacggtcac
gtttcaggggacgagcctcctccctgtgtgttggagaggttgtgtgagctgcacgacgga
ctggtggtggaggcgaaaggcatcaaacagcactacttcaaaccctacatacagaaactg
ctgcagaaacggatcctgagagggaacgcagagcttttaacagaactgttggatcctcag
aacttcattgataacaataaagccataaataaagagtatgaggagtacgtgttgacggtg
ggagattttgatgaacgagtgtttctcggagccgatgccgatgaggaaataggaaccccg
aggaagatcgttcaggaaccgtccgccagccaaacgaccaatcagaagcagctgcagcag
catgtagagaagtccggctccctcgccccctccacccctctgactggacgcgtttacctg
aaggagaaggacctgctcgtcacgcccgtctcctcggcaacgcagagcgtcagccggctg
cagagcatggtgtccgggttgaggacggcccccagcgaccacctgatgcaaatattcaag
tcgtgctccagagatcccacagactccatattgtccagagtgaagacgctgggacaaacc
ttcaaagaacattacaccaaagactcggaggacacacccggatctcatatagactttgca
gagaaccgtctgaagctggctgagatcctctactacaagattttggagaacgtcatggtt
ccggagaccaaacggctgcaaggcaaagacatgagtgtgttgttggagcaggatatcttc
cactgctccctgatgggctgttgtctggaggtggtgttgttctcctacagctcccacaga
accttcccatggatcatcagcgtcctcaaactggccccgttctacttctttaaggtgatc
gaggtgtttatccgctcagaggaaggtctgtccagagacatggtgaaacatctgaactcc
attgaggagcaggttctggagagcagagcgtggaccgcggactcggccctgtggagcgcc
ctgcaggctgctgggagcaaggtccccacagtggaggaggtgaatttttcctccagcctc
gacacaggttctggttcaggttctggatccaccattggaggtcagtcccacctgcctctg
gtcgccctctctcccatcatccacccacgcatcagggagttcagatcgggtctgggcagc
atccgcaaagacgtgcctccgtctcctctgtcggtccacgacaggtacagctctcctgca
gccggcagcgccaaacgccgtctttttggcgacgaccctccgaccctggggctgaatccc
ggcttgagcccgatgtcgtctccggccaaaaggttaacgttcggctcaagtggcaccctg
aagatcggaggccaggtgacacccaccactgtcctcagtttcccactgcaaggtgtgaat
aatgaacgccacatcgcgctgatcccggttcagcagtgcgactcctctggcaccgtcact
gctcggtttctgttcaccgcctccccgagcagaatcaccgcccctgcacccacgacctct
gacccccagacgggaagtggacgaccacgacgcaccgggtcgctcgctctgttcttcagg
aaggcgtatcacctggccagcgttcgtctgagggatttgtgcgcgaggttggacatctcc
tctgagctacgagggaaaatctggacgtgtttcgaacacgctctggttcactgcactgac
ctgatgaaggaccgacacctcgaccagctgctgctctgtagcgtctacattatttccaaa
atcaccaaagagactcacaccttccaggacatcatgaagtgttaccgcagccaaccacag
gccagcagccatgtgtaccgcagtgtgttactgcgacacagagaacccagggagcaggtg
gctgatgagaacatggaggtggatcctgtttctggtggcgaatctgccgagaaaaccaat
ccggtgtcaggagaagcagactccggccaatcaggcgaggaggaacgtggtgacctcata
caattttacaacactgtgtttgtcctgaagatgaaaagcttcgctctgcgatacgccacc
catgacaaccgggcggacgctcctcctctctctccgttcccgtcggttcgggctcagccg
ctctctcctcgtcgaatctctcagagacactcgctgtatgtgtcgccccacaagaactcc
gcaggatgcctcacgcccaactcctacacgtacaggatcaacagcagcccatccaaggag
ttatcagacatcaaccggatgatcagacagggctgtgtgagcaggaagcgcgccttcacc
atggaaggggacgtgatgatgccgtcagcggcgtgcgactcccccagcaagagggcgtgt
ccggagaacggcagcagccccgacgtgctgctgaagcggctgcaggacgtcgtgtccgag
cggcagagtcgctga
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