Hippoglossus hippoglossus (Atlantic halibut): 117762253
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Entry
117762253 CDS
T07778
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117762253 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117762253 (usp48)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117762253 (usp48)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117762253 (usp48)
Ubiquitin system [BR:
hhip04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117762253 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117762253
NCBI-ProteinID:
XP_034442705
LinkDB
All DBs
Position
5:29827303..29843189
Genome browser
AA seq
1059 aa
AA seq
DB search
MTVRELPGQHLIMAPRIQLEKAAWRWVEAVKPEEIRQEHIELAYRVNLPACKRGACRRNC
KGNPNCLVGIGEQAWLGDIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWF
HNLELRRSLYQCHNSRAQEHNIESEYEPQSICEHLQYLFALLQNSNRKYIDPSGLVKALG
LDTGQQQDAQEFSKLFLSLLEDTLSKQKNSNLQNVIQLQFCGQFSYVTVCNQCGRSSALP
SRFYELELNIQGHKNLRECVTEFLKEEKLDGDNCYFCESCQSKQSATRTIKLHSLPPTLN
LQLMRFVFDRQTGHKKKLNTFISFPEQLDMGSFLEGKEDQKCVYELSAVLIHRGISAYSG
HYIAHVKDARTGDWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGFHCSRN
AYMLVYKVQEEESSDPSRTNIEVPAFLQRLVDQDNHKFEEWCSEMADMRKQSVDKGKAKH
EEVKELYELLPTKEGEPYEFIPLDWLKKWLDDSTATKDIDNSFFLCSHGKLHPDKVGDSK
RISLQAAQLLYERYGGGPRLDDSSLCSECVGQRCRVLRLKNQLNEDYKEVSNLVKRTLSD
EGYWVGKASLRSWRQLALEQLEEDEHETKHSNGQTNGQGPHIKEFSSELSEGNEDEMKTF
NEDIVCSHGGLTILETERKLVSTEVWTKLRAYFSKAPEFTQNQEPCQQCLTLEQEEKDNE
AISKMMALDQKNQLLNLFNEKNRPTLTKWPQGTDVLYIVPLFFVDEWRKFIRRPTKSSPV
SNVGNTLLLCPHGGFMFTHDSLISGDAQHIALLWPNEWEVISRLFIVDQPISIHCFKQTT
PSGPTTQFTTQPDLCWECRESFLFQQQRDLREYTQATIYIRKVIEDQRLLKEAAPETNAS
SSEAEDEKEELPKVDGEIDPDFSQSEDGAKRLKLCDSSTASAAAVPVSNMTKLGGIRRST
RHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDSATLGSLGVIP
ESIICLKADEPIADFAAMDDVYQVRMPEEGFKGTGLLGH
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgagggaattaccaggccaacatttgattatggctccccgcatacaactggag
aaagcggcttggcgttgggtggaagcggtgaaaccagaagaaatcagacaggagcatatc
gagctagcatatcgcgtcaacctcccggcctgcaagagaggagcctgcaggaggaactgc
aaagggaatcccaactgtcttgtgggcattggtgagcaggcatggctgggggacatagat
gaaaatgctttccacaatattgatgacccaaattcagagcgccgagacaagaacacattt
gtcggactgaccaacctgggtgcaacatgttacgtcaacacattcctgcaagtgtggttc
cacaacctggagttgcggaggagcctctatcagtgccataattcaagagcacaggaacat
aacattgagtctgagtacgagcctcaatccatctgtgagcatcttcagtatctgtttgca
ctgctgcagaacagcaacagaaagtacatagatccttcagggctggttaaagcactgggt
ctggatacaggacagcagcaggatgcccaggagttttccaagcttttcttgtctctattg
gaggacacactgtcgaagcaaaagaactcaaacctgcagaatgtcatccagctgcagttc
tgtggacagttctcctacgttactgtgtgtaatcagtgtggacgatcatctgctctccca
tcccgattctacgagctggagctcaacatccagggtcacaagaacctcagagagtgtgtc
acagagttcctgaaggaggagaagctggatggtgataactgctacttctgtgagagctgt
cagagtaaacaaagcgccaccagaacgataaagctgcacagccttcctccaaccctcaac
ctgcagctcatgcgctttgtctttgatagacaaacaggccacaagaagaagctgaacact
ttcatcagttttccagagcaactggacatggggtcatttctggaaggaaaagaggaccag
aagtgtgtttatgaactgagtgcagtgctgatccatcggggcatcagtgcgtactcaggc
cactacattgcccacgtgaaggatgctcgtactggtgattggtacaaattcaacgatgag
gaaattgagaagatggaaggcaagaaactgcagcttggcattgaggaggacattgctgag
acagttaagtcccagacacgaaagccaaagtgcagtaaaggcttccactgctccagaaat
gcctacatgctggtgtataaggtccaggaagaggagagctcagatccctccaggaccaac
atcgaggtgccagccttccttcagaggttggtggaccaagacaaccataaatttgaggag
tggtgcagtgaaatggcagacatgagaaaacagagcgtggataagggcaaggccaagcac
gaggaggtgaaggaactctacgagcttttacccacaaaagaaggtgagccatatgagttt
atccccctggactggctgaagaagtggctggatgactccactgccacaaaagacatcgac
aactctttcttcctttgttcacacggtaaactgcacccagacaaggtgggagattccaaa
aggatttctctgcaagctgctcagctcctctatgagcgatacggcggagggccgagactg
gacgattcctcactgtgtagtgagtgtgttggacagcgatgccgagtgctgcggctgaag
aaccagctcaatgaagactacaaggaggtctccaacctggtcaaacgcacgctcagtgac
gagggttactgggtgggcaaagcatctctgcgtagctggaggcagttggctttggaacag
ctggaggaggatgaacatgaaaccaaacacagcaatggccagaccaatggacagggacca
cacatcaaagagttcagttcagagctctcagagggcaacgaggatgagatgaagactttc
aatgaagacattgtctgcagtcatgggggtctgactattctcgagactgaacggaagtta
gtatccactgaagtttggaccaagctaagggcatacttctccaaagccccagaattcacc
caaaaccaagagccctgtcagcagtgcctgacgttagaacaggaggagaaggacaatgag
gcaatcagtaagatgatggccctggaccagaagaaccagctgctcaaccttttcaatgag
aagaatcggccaaccctcaccaagtggcctcagggcacagatgttctttacatagttcct
ctgttctttgtggatgagtggagaaaatttatcaggagacccacaaaatcctctccagtg
tctaatgtgggcaacactctgcttctctgcccccatggagggttcatgtttacccatgac
tccctgatcagcggagatgcacaacatatagctctgctctggcccaacgaatgggaagtg
attagcagactcttcattgtggaccagcccatctccatccactgcttcaaacaaaccaca
ccaagtggacctaccacccagttcaccactcagcctgatctgtgttgggagtgcagagag
agcttccttttccagcagcagagggacctcagagagtacacccaggcaaccatctacatc
cggaaagtcatcgaagaccagaggctgttaaaggaggcagctccggagacaaacgccagc
agctctgaggcagaggacgagaaagaagaacttccgaaggtggatggagagatagaccca
gactttagccagtcagaagatggtgcaaagcggctaaagctgtgtgacagcagcacagcc
tcagcagcggctgttcctgtgagcaacatgaccaaactaggtggaatcaggagaagcacc
cggcacaggaaactccgaggagagaaagcactcatagtttcagctaatcagacacttaaa
gagctgaaaatacagattatgcacgccttctctgtggctccatttgaccagaacctctcc
attgatggaaaaagtctgacagacgactcggccactttgggcagtctgggcgtcattcca
gaaagcatcatctgtctgaaggctgatgagccaatagcagactttgctgcaatggatgat
gtctaccaggtgagaatgcctgaagagggattcaaaggcactgggcttctcggacactga
DBGET
integrated database retrieval system
