Hippoglossus hippoglossus (Atlantic halibut): 117762300
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Entry
117762300 CDS
T07778
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117762300 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117762300 (rae1)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117762300 (rae1)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117762300 (rae1)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117762300 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
117762300
NCBI-ProteinID:
XP_034442787
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All DBs
Position
5:complement(22627388..22633399)
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AA seq
369 aa
AA seq
DB search
MSLFGTSSGFGTAVTGVFGNATTESHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERSYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLSTVGSDGRFSFW
DKDARTKLKTSEQLDQAITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttgggacgagctccgggtttggaacagcagtgacaggtgtctttgggaac
gcaacaacagaaagccataatcccatgaaggatgtagaagtgacttcacccccagatgac
agtatcagttgtctggctttcagtccgcccaccatgccagggaatttcctcattggagga
tcctgggccaatgatgtcaggtgctgggaggtgcaagacaacggccagacagttcccaaa
gcccaacagatgcacacgggtccagtgctggatgcatgctggagcgatgatggtagtaaa
gtgttcacagcttcctgtgacaagacagccaagatgtgggatctcaacagcaatcaagcc
atgcagatagcacagcatgatggtccaatcaaatcaatccactggataaaagcccccaac
tacagctgtatcatgactggcagctgggacaaaacactgaagttctgggacacccgttct
cccaatcccatgatgtctttgcagatgccagagagaagctactgtgcagatgttgtttac
cccatggcggtggttgccacagctgagagaggactgatagtgtaccagctggagaaccag
ccctcggaatttcgcagaatagactctcctcttaaacatcagcaccgctgtgttgccata
ttcaaggacaagcagaacaagcccacaggctttgccctgggaagcattgagggtcgagtg
gccatccactacatcaaccctccaaacccagccaaagacaacttcactttcaagtgccac
aggtccaatggaaccaacacaaccactccgcaggacatctacgctgtaaatgctatctcc
ttccatcctgttcatggcacactgtctactgtgggctcagacggccgcttcagcttctgg
gacaaagatgcccgcaccaagttgaagacgtccgagcagctagaccaggccattacagct
tgctgcttcaaccataatggcaacatctttgcgtatgcttccagttacgactggtcgaag
ggccatgagtactacaacccccagaaaaagaattacatctttctgagaaatgctgcagag
gaactgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system
