Hippoglossus hippoglossus (Atlantic halibut): 117762588
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Entry
117762588 CDS
T07778
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117762588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117762588
04131 Membrane trafficking [BR:
hhip04131
]
117762588
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117762588
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117762588
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117762588
mRNA cycle factors
P-body specific factors
117762588
Membrane trafficking [BR:
hhip04131
]
Others
Actin-binding proteins
Myosins
117762588
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117762588
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117762588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
117762588
NCBI-ProteinID:
XP_034442889
LinkDB
All DBs
Position
6:complement(15909171..15925353)
Genome browser
AA seq
1822 aa
AA seq
DB search
MAASELYSRYARVWVPDAAEVWKSAELIKDYTAGDLKLSLQLEDGTEVEYKIDPRTNDLP
PLRNPNLLVGENDLTSLSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSSSGETSVEDRVLASSPIMEALGNAKTTRNDNSSRFGKYIEIGFDKKHCIIGANMRT
YLLEKSRVVFQAREERNYHIFYQLCASSHLPEFKAFKLGCADDFHFTNQGQSPVIDGVDD
AKEMNNTRKAFSLLGISESDQMEIYQILASILHLSNVEIKDQSADRSSISPDDVHLMVFC
ELMGVPCEEMAHWLCHRTLKTTTETYVKSFSKVNAVNGRDALAKHIYAKLFSLIVGSINN
ALKSAAKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEE
ISWTLIDFYDNQPCIDLIEAKLGVLDLLDEECKMPKGSDDTWAQKLYNTLLKQNVHFDKP
RLSNRAFIIHHFADKVEYQCEGFLEKNKDTVNEEQINVLKNSQFDLLLKLFEEDEKAKGS
TKKRTGVTGRAGPSQKDNKKTVGLQFRQSLRLLMDTLNATSPHYVRCIKPNDDKSPFTLD
PMRAVQQLRACGVLETIRISAAGFPSRWTYQEFFRRYRVLMKQKDVLNDRKQTCKNLLEK
LVKDQDKYQFGKNKIFFRAGQVAYLEKLRSDKLRMACVSIQKTIRCWLARKKYLRMKASA
VTIQRYVRGHQARCFVQGLRRTRAAIVIQRNVRMWVNRRHYQQQRLAAITIQCFLRAYMA
RKQYYKLMFEQKAVVIQKWVKGWLARQHYKRTMAAIVLLQSCVRRIQAKKEFKKLKVEAR
SVEHFKKLNFGMENKIMQLQHKINDQQKGNKELRERLSVVEKTQSVERERQSREIENLRS
SEQKVRAKAEKLPSLLEQLSFLQHELENTRREKEDLEEQTKVYKEQTQQVVEELNMKNSL
LNSEKDELNTLFVEQTQRLTEIKTNVENTKQMEKDFTEERSRYQGLLSEHLHLEERHRDL
KEKMDLSIQSSSKPGHKRTDSNYSSNSSEFSHSLASTEGEDSSTQKEDETQATVDLPVLL
KLQRRVKELEQEKQSLWQQLDKREEAKQEKAKEVEEQRTVGRTELDLETLKRQELESDNK
KLKQDLNELRKSLTNENSDLMPPDPGTRPYEVLMEQLTSSNDELEMRKEEVLLLRSHMVR
QEALKHKDSPLGESVKLGLSEIPSFQDIDRSLDIHTLNEDGELWLAYEGLKETNMFLESQ
MQEQERVHSEKCQSLLEDVNKLKDEKEQQQKLLAQSLLLPEDARIDASLKHEIIRLTNDN
LENMDRQEKQDKTIRKLKKQLKFYMKKVGDIEANTQQMIDASAMNAPMRAVNITRKEKEY
QGMLKYTEGEENRLLKNLVLDLKPRGVAVSLIPGLPAYIIFMCLRYADNVNNDRRVSNLL
NSTISSIKGVIKRRGGDFEVVSFWLANSCRLLHCLKQYSGDEVFMTHNTVKQNEQCLSNF
ELSEYQQVFGDLAIQIYCQLIKSMENVMQPLIVASMLEHETIQGVLGSKPTGLRKRSTSF
PEEEAVTVEVLLQRLGVFHTTMSQHGMDPDLIKQVVKQQFYIICAVTLNHLLLRKDMCSW
SKGLQIRYNIWQLEEWLAERDLADCGAKETLEPLVQAAQLLQIKKKTEADAQAICSMCTA
LTTAQILKVLTLYTPVIEFEERVPTAFITTIKNILKDRGESATLMMDGKKIFSVTLPFTP
STVALETIQVPASLNLSFLTRI
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccgaactgtactccaggtatgcccgtgtatgggtcccagatgcagccgag
gtgtggaagtcagcggagcttatcaaagactacactgctggagacctgaagctgtccctg
cagctggaggatggcacggaggtggaatacaaaatagaccctagaaccaacgacctgcca
cctctaaggaaccccaacctcctggtgggggagaatgatctcacgtcgctcagctacctc
cacgagccagcagtgctgcacaacctcaaagtgcgcttcattgactccaagttgatttac
acgtactgtggaattgtcctggttgccataaatccctatgagagcttgcccatatatgaa
gctgacatcatcaatgcctacagtgggcagaacatgggggacatggacccccatatattt
gcagtggcagaggaagcatataaacagatggccagggatgaaagaaaccaatccatcata
gtgagcggcgagtctggagctggcaaaaccgtctctgctaagtatgctatgcgttacttt
gccacagtcagctcctctggtgagaccagtgtagaggatcgagtcctcgcctccagcccc
atcatggaggcccttgggaatgccaagacaacaaggaacgacaacagcagtcgcttcggg
aagtacattgagattgggtttgacaagaagcattgtataattggtgctaacatgagaacc
tacttactggaaaagtccagagtggtgtttcaggcccgtgaagaaagaaactatcatata
ttctatcagctgtgtgcctcgtcacatctaccagagttcaaagcctttaagttaggttgc
gcagatgacttccactttactaaccagggtcagagcccagtcatagatggagttgatgat
gccaaggagatgaataataccaggaaggccttctcacttttaggaatctctgaaagtgat
caaatggaaatttaccaaattctggcgtctattctccaccttagcaatgtggagattaaa
gatcagtcagcagacagaagcagcatctcgccagatgatgtgcacctgatggtgttttgt
gagctgatgggggttccatgcgaagaaatggcccactggctatgtcacaggacgctcaag
acaaccacagaaacctacgtgaagtctttctccaaagtgaacgcggtcaatggccgagat
gccctggctaaacacatctatgccaaactcttcagcttgattgtgggcagtattaacaac
gccttaaaatctgcagcaaaacaacactcattcatcggtgtgctcgacatttacgggttt
gaaacatttgatgtgaacagctttgagcagttttgcatcaattatgcaaatgagaagctt
caacaacagttcaacctgcatgttttcaaattggagcaagaggagtacatgaaagaggag
atctcatggacattgatcgacttctatgacaaccagccgtgcattgatctaattgaggca
aagctgggggtcctggacctccttgatgaggaatgcaagatgccaaaaggctctgatgac
acatgggcccagaaactgtacaacacccttctgaagcagaatgtccactttgataaaccc
aggttatcaaacagagctttcatcatccatcactttgcagacaaggtggagtaccagtgt
gagggcttcctggagaaaaacaaggacacggtcaatgaggagcagataaatgtgctgaaa
aacagccagtttgatttgcttctgaaactgtttgaggaagatgagaaggcaaagggttcc
actaaaaaacgtactggcgtaactggaagggccggtccgagtcagaaggataacaagaag
actgttggactgcagtttcgacagtctctacgtttgctgatggacacacttaatgctacg
agtcctcactacgtacgctgcattaagccaaacgatgataaatctccattcaccttggac
cctatgagggcagtgcagcagctgcgagcatgtggtgtcctcgagacaatccggatctca
gcagccggcttcccatctagatggacctatcaagaattcttcagacgttatcgggtcctc
atgaagcaaaaagatgttcttaatgatagaaaacagacatgcaaaaatctcctcgaaaaa
cttgtgaaggaccaggataagtaccagtttggcaaaaacaagatcttcttcagggctggt
caggtggcttacctggagaagctgcgttccgacaagctgcgtatggcttgtgtcagcatc
cagaagactatccgctgctggttggcccgcaaaaagtatctgaggatgaaggcttctgcc
gtaaccattcagagatatgtacggggccaccaagcacgttgttttgttcagggtctacga
agaaccagagcagccattgtcatccagcggaacgtgcgcatgtgggtgaacaggagacac
tatcagcagcagcgcttggcagctatcaccatccagtgcttcttgagggcctacatggca
agaaagcagtattataagttgatgtttgagcaaaaggctgttgtgatccagaagtgggtg
aaaggctggctggccagacagcattacaaacgcaccatggcagctatcgtcctgctgcag
agctgtgtgcgccgcatacaggccaagaaggaattcaagaagctgaaggtggaggcgcgc
tctgttgagcactttaagaagctcaactttggcatggagaacaaaatcatgcagctgcaa
cacaagataaatgaccagcaaaaaggaaacaaagagctccgtgagaggctgagtgtggtg
gagaagacccagagtgtggagagagagagacagagcagagagattgaaaacctacgtagt
tccgagcagaaggtcagagccaaggcagagaaacttccctctctgctggagcagctctcc
ttccttcagcatgagttggaaaacacgcgcagagagaaagaagatctggaggagcagaca
aaggtctataaggagcagactcaacaggtagtagaagagcttaatatgaagaacagcttg
ttgaacagtgaaaaagacgaactcaacacattattcgttgaacaaacacaaaggttaaca
gagattaaaaccaacgttgagaacactaaacagatggagaaggacttcacggaagaacgt
tctcgctaccaaggtctgctgagtgaacacctgcacctggaggagcggcacagagacctg
aaagagaagatggatctcagcattcagagttcaagcaaacctggtcacaagaggacagac
tccaactacagcagtaactcctcagagtttagtcacagcttagcttctacagagggagag
gacagttctacacaaaaagaggatgagacccaggccacggtggacctgccggtgcttctg
aagctccagagaagagtgaaggagctggagcaggagaaacagtcactgtggcagcagctg
gataagagagaagaagccaaacaagaaaaggcaaaagaggtggaggagcagagaactgtt
ggccgaacagaactggatttggagacactgaagaggcaagagttggagtctgacaacaag
aagctgaagcaggatctgaacgagctgcgaaagtctctgaccaatgagaacagtgacttg
atgcctcctgaccctggtactcggccctacgaggtactgatggaacaactcacctcctcc
aacgatgagctggagatgagaaaagaagaagtgctgctgcttcgatcgcacatggtccgc
caagaagctcttaaacataaggactctccactgggcgagagtgtgaaattaggcctcagt
gaaattccctcgtttcaagacattgacagatccctggatatccatactctgaatgaagat
ggagagctatggctggcttatgaaggcttaaaagagaccaacatgttcctggagagccag
atgcaggagcaggagcgtgttcacagtgagaagtgccagagtcttctcgaggacgtgaac
aagctgaaggatgagaaggagcagcagcagaagctgttggctcagagcctccttctgcct
gaagacgccagaatcgacgcgagcctgaagcatgagatcatacggctcaccaatgataac
ctggagaacatggatcggcaagaaaaacaggacaaaaccatacgcaagttgaaaaaacaa
cttaaattttacatgaaaaaagttggcgatattgaagcaaacactcaacaaatgatcgat
gcttctgcaatgaacgctcccatgagagctgttaatatcacccgcaaggagaaagagtat
cagggcatgttgaagtacacggagggtgaggagaaccgcctgctaaaaaatctggtctta
gatctgaagcctcgcggcgtagcagtaagcttgattcctgggcttcctgcctacatcatc
tttatgtgcctccgatacgcggacaatgtgaataatgaccggagagtcagcaatctgctc
aattccaccatcagcagcattaaaggggtcatcaagagacgaggaggtgattttgaagta
gtttccttttggttggccaacagctgccggctgttgcactgtttgaagcagtacagtgga
gatgaggtcttcatgacgcacaacactgtcaaacaaaacgagcagtgcttgtccaacttt
gaactgtcagagtaccagcaggtctttggtgacctggccattcaaatctactgtcagctc
atcaagagcatggagaacgtcatgcagcccctgatagtggcgagcatgctggagcacgag
acgatccagggagtcctggggtccaaaccgacaggcctgaggaagaggagcacgagtttc
ccagaggaggaggcggtcaccgtggaagtcctcctgcagcgtcttggcgtcttccacacc
accatgagtcagcatgggatggacccagacctcatcaaacaggtggtgaagcagcagttc
tacatcatctgcgcagtcaccctcaaccacctgctgctgcggaaggacatgtgctcctgg
agtaaaggcctgcagatcaggtacaatatttggcagctggaggagtggctggcggagagg
gatctggcagactgtggtgccaaggagactctggagccgctggtacaggccgcacagctt
ctgcagatcaagaagaagacggaggcagatgcccaagctatctgcagcatgtgcaccgcc
ctcaccacggcacagattctaaaagtgttgaccctgtacactccagtgattgaatttgaa
gagcgagtgcccaccgctttcatcacaactattaaaaacattttgaaagacagaggtgag
tcagccactttgatgatggacggcaagaagatcttctccgtcacgctccccttcacaccc
tccactgtggctctggagaccatccaggttcctgctagtcttaatctgagcttcctcacc
cgcatctaa
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integrated database retrieval system
