Hippoglossus hippoglossus (Atlantic halibut): 117762659
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Entry
117762659 CDS
T07778
Symbol
nup160
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117762659 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117762659 (nup160)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117762659 (nup160)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117762659 (nup160)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117762659 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TPR_1
RMD1-3
DUF2252
Motif
Other DBs
NCBI-GeneID:
117762659
NCBI-ProteinID:
XP_034443045
LinkDB
All DBs
Position
6:complement(146144..173206)
Genome browser
AA seq
1389 aa
AA seq
DB search
MAVALERSFVEICGFERETVRRFREVTLTLGVTAPPGGQKFADSAGAFHYEESGKLLSVT
SNRFIHWLTSGDSVQLVEQSLDADLLNNTVKLRFTHCNVLPGGVTIQETLSNVIILISTN
QSVHRLVLPHPTCMYRSELVTELHMQSVLTDVGKLSLQDPSHSATIPSSVVQMGSPSSCT
AWLSHQGEAHYALASPVGGIMVVTLPPHDTPGGVSTVELKRSSVMRRLSGWMPTVMRGDS
RTEHVVSLIVRELEDDSFIFTLSQDHRLRMWSLTEQACLLEVDVLEYMPACKGVQRVSGQ
GHRMRMTFSSTTGLCLCXYLAVPQRGQFTVLQLVTADNNRYSLEHISTLFTTQETLVDFH
LTSTDVWGLWVDESNSTVIKYINFEHNLAGQWNQVFVQPPPEEEVHVGVDQDPRTYLDVL
FSPLRFSAAAVVKALQIFRRGSERISDVSWETLKKEVTVAVETELQNSVTEFEFSQEEYR
QLQVEFWSKFYACCLQYQESLSTPLALTVSHSTGLVCLLKKGSVSFLLPCFAVDHLYLSS
DEYLFSEEETPVTEDPEVGRDILQLVQCLRLLSDAVSGEMAYEMEKALDHLQSAGRAAEV
VMETMLSNDSDNVIEDIQNKLQDVRNPTAAMMVLLREMDLETDSEVTGEGAITPGQTLTV
RLSLSQLYGSSAAISLVCQAVSHMAMTRALFCRDLLILQKLYLRLGDNVFLGGGAQLLQL
QQDLIPRTCHLLSSYHLLKHMSQSVASSVPVDIIDANLQHLTVLELSDCPTPSTRTVLSP
QTVVELFYQTAARRIIMSQIFSQQQSHALLVWSHMISNVVALLAQLLWPSNPGFQFPECL
MSNCQYTQLQEYVRLIGPWCQVNIGSCRFMLGQCYLANGEGQKALQCFQEAATEVEKEEF
LMRLTGTEDEEAAATCRLQYYNKVLRLLEDVGLPELVIQLASLALTEAVGDVSTQAALWT
RIFKHHLDLGHNSEAYEALTQNPDSSMQLDCLRQLVVVLCERSQLQDLVQFSYVNLHDEV
VSIIESRARGLDLLTHNYYELLYAFHINRHNYRKAGTVMFELAMRLGREVPTRLGLQKQV
NCYLSALNCLRLIRPEYAWIVTPASGAVYERAGASPKRNSDGDFSREPVKRQVDILELND
LEKEYFLSRCRLTLAQHHPPSATIAGSASAEEMVSLLVQSGLFDSALCLCQTFKLTLTPV
FEGLAFKCVRLQFGGEETQNEAWSWLADNQLSSVVNTKESSAADEAWRLLASYLDRYPSA
NGQHHRCVINKLLSHGAPLPDWLVKSYKAVDAASLLRLYLNFDLLEAAAELVLENVDALL
GRGHQYFGIEKPLSATFSSVWLPYTSIDQLMQALADTQTNSSIYNKVRDKLDEYHKLVDL
TTRRRLVTR
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgctggaaagaagcttcgtggagatctgcggcttcgagagagaaactgtt
cgacgcttcagagaagtgacgctgaccctcggtgtgactgctccccctggtggccagaag
tttgcagacagtgctggagcgtttcattatgaggagagtgggaagctgctgtcagtcacc
agcaacagattcatccactggttgacgtcaggtgactcggtgcagctggtggaacagtct
ctggatgccgacttgctcaacaacaccgtcaaactccgcttcacccactgcaatgttctg
ccggggggggtcaccatccaggagacgctcagcaacgtcatcatcctcatctccaccaat
cagagtgtccacagactggtgctgcctcaccccacatgcatgtaccgcagtgagctggtg
acggagctccacatgcagtccgtcctcactgacgtggggaagctgagtctgcaggaccct
tcgcacagcgccaccatccccagctcagtggtacagatggggagtcccagctcctgcaca
gcctggctgagtcaccagggggaggcgcactacgccctggcttcacctgtagggggcatc
atggtggtcactctgcccccccacgacacaccaggtggcgtgtcgacggttgagctgaag
aggagctctgtgatgcggaggttgtcaggttggatgccgacagtgatgagaggagacagt
cgaactgaacatgtggtcagtctgatcgtcagagaactggaggacgactcgttcatcttc
acactgagtcaagatcatagactgaggatgtggtcgctcacggagcaggcatgtctgctg
gaggtggacgtgttggagtacatgcctgcgtgtaaaggagttcagcgtgtgtcaggtcag
ggtcatcgtatgaggatgaccttctcctccaccaccggcctctgtctctgcngttacctg
gccgtccctcagcgaggacagttcaccgtcctgcagttggtcactgccgacaacaaccgc
tacagcctggaacacatctccaccctgttcaccacacaggaaactctggtggattttcat
ctgacatctacagatgtgtggggactgtgggtggacgagtccaactccactgtcatcaag
tacattaactttgaacataacttggcaggtcagtggaaccaggtgtttgttcagcctcca
ccagaggaagaggttcatgtaggagtcgaccaggaccctagaacgtacctggacgttctc
ttctcccctctcagattctcggctgcagccgtagttaaagctctacagatcttccgtcgt
ggctcagagagaatctctgacgtttcctgggagacgctgaagaaggaagtgacagttgct
gtggagacggagcttcagaacagtgtgacagagtttgagttctctcaggaggagtaccgt
cagctgcaggttgagttctggtcaaagttctacgcctgttgtcttcagtaccaagagtct
ctgtccacccctctcgctcttaccgtgagtcacagcaccggactggtgtgtctgctcaag
aagggttccgtttccttcctgcttccttgttttgctgtggatcatttgtatctgagcagc
gatgagtatctgttctctgaggaggagacgcctgtgactgaagacccagaagtgggccgg
gacatcctgcagctcgtccagtgtctgcggctgctcagtgatgctgtttctggagagatg
gcatatgagatggagaaggctctggatcatcttcagtcagctggacgagctgctgaggtc
gtcatggagaccatgctgtccaatgacagcgataacgtgatagaggacattcagaacaaa
ctgcaggacgtccgtaacccgactgcggccatgatggtcctgctgagggaaatggaccta
gagacggactctgaggtcacaggtgaaggagccatcacacctggtcagactctgaccgtc
aggctcagcctgtcacagctgtacggcagcagcgccgccatttcgctcgtctgccaggcc
gtcagtcacatggccatgaccagagcgctgttctgcagagacctgctgatcctgcagaaa
ctctatctgaggctgggcgacaacgtgtttctgggtgggggggctcagctgctgcagctt
cagcaggacctgattcctaggacttgtcacctcctgtcgtcttatcatctccttaaacac
atgagtcagagcgtcgcctcgtccgtccctgtggacatcatagatgccaacctgcagcac
ctcacagtgttagaactctctgactgtccaactccgtccaccagaacagtgctcagtcct
cagactgtggtggagctcttctatcagacggcggcgaggaggatcatcatgtctcagatc
ttctctcagcagcagagtcatgctctgctcgtctggagtcacatgatctctaacgtggtc
gctcttctcgctcagctgctttggcccagtaaccctggtttccagtttcctgaatgtctg
atgtcaaactgtcagtacactcagctgcaggagtacgtgaggctgattggtccgtggtgt
caggtgaacattggctcgtgtcgcttcatgttgggtcagtgttacctggccaacggcgag
ggacagaaggcgctgcagtgtttccaggaggcggcgacggaggtagagaaggaggagttt
ctgatgcgactgacaggcactgaggacgaagaagctgccgccacctgcaggttacagtat
tacaacaaggtgctgcgcttactggaggatgtgggtttacctgagctggtcatccagtta
gcgtctttggccttaacggaggcagtcggtgatgtcagcactcaggctgctctgtggact
cggatctttaaacatcatctggacctcggacacaacagtgaagcttatgaagctctgaca
cagaacccagacagcagcatgcagctggattgcctccgtcagctggtggtggttctgtgt
gaacgctctcagctccaggatttagtccagttctcctacgtcaacctgcacgatgaggtc
gtcagtatcatcgagtctcgtgccagaggtctggacctgctgactcataactactacgag
ctgctgtatgccttccacatcaacagacacaactacaggaaagcggggaccgtcatgttt
gagttggcgatgcgtctcggtcgcgaggttccaactcgtcttggtcttcagaaacaggtg
aactgttatctgtctgctctcaactgtctccgccttatcagaccagagtacgcctggatc
gtcacacctgcgtctggagctgtgtacgagcgtgcaggagcgtctccaaagagaaactcg
gatggagatttttctcgtgaaccagttaaacgtcaggtcgacatcctggaactcaacgac
ctggagaaggagtacttcctgtctcgctgccgcctgacgctagcccagcaccacccacca
tctgccaccatcgcaggaagtgcatccgcggaggagatggtgtccctgttggttcagtcc
ggactctttgactcggctctgtgtctctgtcagacgttcaaactgaccttgactccggtg
tttgagggtttagcctttaaatgcgtcaggcttcagtttgggggggaggagactcagaat
gaagcttggagctggttggctgataatcagctatcgtctgtcgtcaacaccaaagagtcc
agtgctgcagatgaggcgtggcggctgctggcctcttacctggataggtatccctccgct
aatggacagcaccaccgctgtgtcatcaacaagctgctgtcacatggtgcccctctacct
gattggctggtcaagtcatacaaggctgtggacgcggcttcactgttgcgtctctatctg
aactttgaccttctggaagctgcagctgaactcgtcctggagaatgtggacgctctgctg
gggagaggacaccagtactttggaatagaaaagcctctctctgcgaccttctcttcagtt
tggcttccgtacacgtccatcgatcagctgatgcaggcgctcgctgacactcaaaccaac
agcagcatctataacaaagttcgagacaaactggatgagtatcacaaactggtggatctg
acgaccagacgcagactcgttactcgataa
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