Hippoglossus hippoglossus (Atlantic halibut): 117762676
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Entry
117762676 CDS
T07778
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04620
Toll-like receptor signaling pathway
hhip04621
NOD-like receptor signaling pathway
hhip04622
RIG-I-like receptor signaling pathway
hhip04623
Cytosolic DNA-sensing pathway
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117762676 (irf7)
04621 NOD-like receptor signaling pathway
117762676 (irf7)
04622 RIG-I-like receptor signaling pathway
117762676 (irf7)
04623 Cytosolic DNA-sensing pathway
117762676 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117762676 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117762676 (irf7)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117762676 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
CIS_tube
Motif
Other DBs
NCBI-GeneID:
117762676
NCBI-ProteinID:
XP_034443083
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All DBs
Position
6:complement(8437096..8441780)
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AA seq
430 aa
AA seq
DB search
MQSHQKPQFASWLIEQVETGQYTGLRYVTQNKFRVPWKHNSRKDCKDEDSKIFRAWAVAS
GKIHEFPNDKARWKTNFRCALNNLSVRFKMIEDNSKNSDDPHKIYQIKNTEHRQTDLPKQ
DSQEDSVMTPDIYSSPTELFPLGNEYNLENNFTALDLGNQPIEEQLWVENYCQPDPAVLG
SYTVAAENHPQALPDQQSFYEVNPTPVVSSGQQPSIYDLEVSIHYRKKEMLKVTLATACL
QLHYQQEAPDLNGQHLCFPSTDGLLDHKQIEFTNRILNSIQRGLLLEVCETGIYAWRQDR
CHVFASTSDPSVALPDPRKLPQNTRVELLSFEKYVNDLKKFKENNGGSPEYVINMCFGEK
FPDGKALEKKLITVKVVPLICRHFHEMAQMEGASSLHSANVSLQMSHNSLYDLINSVFGL
PIDVDPTFLH
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccaccaaaagcctcagtttgccagctggctcatagagcaggtggagacgggc
cagtacacaggtctgcgctatgtgacccaaaacaagttcagagtcccctggaagcacaac
tccagaaaggactgcaaggatgaggacagtaaaatatttcgggcgtgggccgtggcgagt
ggtaaaatccacgagttccccaatgacaaggcccggtggaaaaccaacttccgctgcgcc
ctcaacaacctctcggtgcgcttcaagatgatagaggacaactccaagaactcggacgac
ccccacaaaatctaccaaatcaagaacactgagcacagacagacagacttgccaaaacag
gactcccaggaggactcagtcatgactccagacatctacagctctcccacagagttattc
cccctaggaaatgagtacaatctggagaataatttcacagccttggatctgggcaaccaa
ccaatagaggaacaactgtgggtggagaactactgccagcccgatccagccgtccttgga
agttacactgttgcagcagagaaccacccgcaagctttaccagatcaacagtctttctac
gaggtaaatcctacaccagtcgtcagctcaggtcagcagccaagtatctatgacctggag
gtctccatccactacaggaaaaaagaaatgcttaaggtcacgttggccaccgcatgtctc
cagctccactaccagcaagaggcccccgacctcaacggccaacacctctgcttcccctcc
actgacggcctgctcgaccacaaacagatcgaattcaccaaccgcatcctcaacagcatc
cagaggggtctcctgctggaggtctgtgagactggtatctacgcctggaggcaggacagg
tgccacgtgttcgccagcaccagtgaccccagtgtggctctgccagaccccagaaagctg
ccccagaacactagggtagagctcctcagcttcgagaagtatgtgaatgacctgaagaag
tttaaagagaacaacgggggctctcctgaatacgtcatcaacatgtgctttggagagaag
tttcctgatggaaaagctttggagaagaaactcatcactgtcaaggtggttcctctgatc
tgtcgacactttcatgagatggcccagatggagggcgcttcgtctcttcacagcgccaac
gtcagcctacagatgtcgcacaacagcctctacgatctcatcaactccgtgttcggcctg
ccgatagatgtggacccgaccttcctgcattag
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