Hippoglossus hippoglossus (Atlantic halibut): 117762697
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Entry
117762697 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117762697
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Cadherin related
117762697
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
117762697
NCBI-ProteinID:
XP_034443114
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Position
6:complement(11956441..11968061)
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AA seq
885 aa
AA seq
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MDLPELKLTSFPAKAPVWSLLVLLCLHTVKGMSGWGGCLDGHDVFVTVRENSRPGEVVAE
LSADTTMEGVQWTLDGKDADWFFLDERYIRLNTSVDKALDREAQSPVLMAELQCYEDDLL
QSVYRVMVEILNENDNSPVFAENSTHSLIISELTPVDTVIFTVLATDADNDKIIYYIDQT
SPDADYFKVDFPNSGEVILSKPLDYETQPVLTVTIHASEMSTAERFNTSTNITIHVLDGD
DQYPQFLPCTLLFQDETSHICTSPVYTVNITEGEEDIVLDFSPGPIYAVDGDRGLSTPLS
YAILSGNDDGRVLIDRVTGEMKLTQGVTDRLTTPMLHLQVLAYQDDDPRKYSVATALIRI
LAVNHFHPVFDEAEYHGFVTAVKSAASLVNTYGGKVLMLHVQDQDFEQGFNPRISFTFSH
TSNHTDIYQLTQEGLVIARTNQLKAKQRHTLEVKATDQESGDATFTTVVIEVLTEGQSIP
HSPLGEERLTGCTVGKAFFLSLVFMTTGGCVLSLVMWLKRKQKGKRDPLERGCVAQGKHP
NVSLRWFNLVSHRSAMPHTEEVPNNREEYGTCNPSFSFPDKPAIYTVPDLPNCRGPAAPG
ATAAPDSSVPPPENTCIPVISNKNASLPTKSSPSSPTLHPATVDLRPTHTAQDAVPSKEN
LNSPPATPLEPPSELPNTSLSPTTPYSRPDSQTTTNDDIIDLVTSPSSQSSALCSQTRIA
YAEIDKPFRKSRVKTPPYSPLLSLSHPKQTSTPPPTPEQEPFKAKLVHMDTSPLDTPPVT
PQQKSMTLSMEEDQPSTSLDQVDQPEQPGADTSSPSEDRRPTEDRRPSENSANTQDDRRA
GEEDDDGFLGDEDGDKQSDDELESDEEELLRVMARCNPVFITFSK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggacctccctgaactcaaactgacttcatttccggccaaggctccagtctggtcgctg
ctggtccttctatgtctgcacacagtcaaagggatgtcagggtggggcgggtgtttggat
ggacatgatgtatttgtgacggtcagagaaaacagccgcccaggagaagttgttgctgag
ctctcggctgacaccacaatggaaggggtacagtggaccctggatggaaaagacgctgat
tggttcttcctggatgaaagatacatccggttgaacacatcggtcgacaaggctcttgac
cgggaggcccagagtcccgtcctgatggctgagttgcaatgttatgaggacgatcttctt
cagagtgtgtacagggtcatggtggagattcttaacgagaatgataactcgcctgtgttt
gcagaaaactccacccactctcttattataagtgagctgactccagtggacactgtgatc
tttaccgtcctggccacagacgcagataacgacaagatcatttactacattgaccagaca
tcacctgatgcagattatttcaaggttgatttcccaaacagtggagaagtgatcctgtcc
aagcctctagactacgagactcaacccgtgctgactgttaccatccacgcctcggaaatg
agcaccgctgagcgcttcaacaccagcaccaacatcaccatccacgtcctggatggagac
gaccagtacccacagttcctgccctgcacgctgctgttccaagatgagaccagtcacatc
tgcaccagtcctgtgtacacagtcaatatcacggagggggaggaggacattgtgctggac
ttctctcctggtcctatatatgcagtggatggagacagaggcctcagcactccactcagt
tatgccatactctcaggcaacgatgacggccgtgtcctgatcgatagagtgacaggggag
atgaaactgactcagggggtgacggacagactcacaactccaatgctgcatctacaggtc
ctggcataccaggacgatgaccccaggaagtactctgtcgccacagcgttgatccgaatc
ctggcagtgaaccactttcacccagtgtttgacgaggctgaatatcacggctttgtaact
gcggtaaagagcgctgcctctctggtgaacacgtacggtggcaaagtgctgatgttacac
gtacaagaccaggactttgagcagggtttcaaccccaggatcagcttcaccttcagccat
acatccaaccacacagacatctaccagctcacacaggagggccttgtgatcgccaggacc
aaccagctcaaggcaaaacagagacacaccctagaggtaaaagccacagaccaagagtca
ggtgatgccacctttactactgtcgtgatcgaggtgttgactgaaggacaatcaattcct
cacagtccactgggagaggagcgcctgacgggctgtactgtgggcaaagcattcttcctg
agcctggtgttcatgactacgggtggatgtgtcctgtctctggtgatgtggttgaagaga
aaacaaaagggaaagagggacccactggagagaggctgtgtggcccagggaaaacacccc
aatgtgagcttgcggtggttcaatctggtgagtcaccgcagtgccatgccacacacggag
gaagttcccaacaacagggaagaatatggaacctgcaatccttccttcagcttccctgac
aaacctgcgatctacaccgtcccagatctccccaactgccgaggacctgctgcaccagga
gcgactgctgcacccgacagcagcgtccccccccctgagaacacgtgcatccccgtgatc
tccaataaaaatgcttctttaccaaccaaaagctcccctagttcacccacccttcaccca
gccactgtggatttgaggcctacacacacggctcaagatgctgtgccatccaaagaaaat
cttaactccccacctgctacacccctggaacctccttcagaactacccaacaccagtctg
agccccacaacaccttattcccgtcccgactcacaaactaccaccaatgatgacatcatt
gaccttgtcacaagcccctcctctcaatccagcgctctatgcagtcaaacccgcattgct
tatgcagaaatagacaaaccattccgcaaatctcgcgtgaagacgcccccgtattcacct
ttactgtccttatcccaccccaagcagacaagcacgcccccacccaccccagagcaggaa
cctttcaaagccaagctggtccacatggatacttcaccgcttgatacacctccggtgacg
ccacagcagaaatctatgactctaagcatggaggaagaccaaccgtccacatcgctggac
caggtagaccaaccagagcagccaggtgcagataccagcagtccatctgaggacagaagg
cctactgaggacagaaggccctcagagaactcagcaaacacccaggacgaccgcagggcg
ggggaggaggatgatgacggctttctgggagatgaagatggagacaagcaaagtgacgat
gagttggagtcagatgaagaagagctgctgagagtgatggctcgatgtaaccctgttttt
atcacctttagtaagtga
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