Hippoglossus hippoglossus (Atlantic halibut): 117762742
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Entry
117762742 CDS
T07778
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117762742 (chd2)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117762742 (chd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
117762742
NCBI-ProteinID:
XP_034443205
LinkDB
All DBs
Position
6:complement(13041902..13068442)
Genome browser
AA seq
1816 aa
AA seq
DB search
MMKNKSEKHEDEGSTRSNASSNSASEESNHSASESGSRSESEHGSVRRRSHNSESNSSSE
SESRSESGSESAESKSQQNTAEVKDKPVRKKERLADVKKMWEEHPDVYGVRRSNRSRQEP
ARLNVGAGGSSDSESESPKRKTSRAKKKENIWKDDDSNDDDEEEEEEEEASDSTDSEQEE
KKIRSRRLPARRPQTKSSSVKKQISQKGKKSRKAESSGEDDDNDDDEDDDDDDDEEDTPK
RQTRGRGATKVKSYKEDQHDIETDSDDLIEMTGDAGEELQDDDSETIEKVMDTRISKKGA
SGASTTLYAVSENGDPSEGFDPENDEGETQHLIKWKGWSYIHNTWESMDSLIQQKVKGLK
KLDNYIKKSEELNSWLRRASPEDVEFHNCQQELTCDLKKQFQIVERVIATKTGKTPGTIE
FPSHSHKMPSSNEPEYLCKWMGLPYSDCSWEDGALVRSLKFGSCIDSFINRNSTKTVPSK
ECKVLKQRPRFVALKKQPSYIGSETLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKT
IQTISFLSYMFHHHQLYGPFILVVPLSTLSSWQREFETWAPDMNVVVYLGDVMSRKTIRD
YEWVNHQTKRIRFNALLTTYEIVLKDKGVLGNINWAFMGVDEAHRLKNDDSLLYKSLMEF
RSNHRLLITGTPLQNSLKELWSLLHFLMPDKFHSWENFEDEHGKGRDNGYHSLHKVLEPF
LLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYRALTKGPRGSSSGFLNIVM
ELKKCCNHSFLIRQPEDGDTETQQEHLQSLVKGSGKLVLLDKLLTRLRQRGNRVLIFSQM
VRMLDILAEYLAKNRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINL
ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLD
HLVIQRMDTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEELFKEAEGEESEPQEMDIE
EILRLAETRESDLGSSATDELLSQFKVANFSSMEETTPELDDKTISEWDNIIPAEQRRKI
EEEEKQREMDDIFMLPRSRSSNKRARANDSDSDVGSKLKNHSSGSESETEDSDDDKKPKK
RGRPRARKNNVEGFTDAEIRRFIKAYKKFGSPLERLEAIARDSELVDKSIADLKRLGELI
HSSCVTAVQEHEEHLKENPVEAKGPGKRRGINIKISGVQVNAKTIIQHEEEFEPLHKVVP
SNPAERNKFQLTCRVKVAHFDVDWDLQDDTQLLLGTYEHGFGNWDLIKTDPDLKLADKIL
PDDPSKKPQGKQLQARAEYLLKLLKKEQDNADVSKTGEEVKVKKRKPRVKKENKILKDEQ
GNDISSPRLSDNPSEEGEVKDDGTEKSPNKKRQKKKDNKENKEKQGTSKKEKDGDKEKKG
TKPKKEKAKGAKGKKTQGPVHITAGSDPVPIEGKEDDELDQETFSICKERMRPVKKALKQ
LDKPDEGLSDQEQLQHTRTCLLKIGDRITECLKFYNDPEHVKIWRRNLWIFVSKFTEFGA
RKLHKLYKMAQKKRSHEEEKEQKKKDDSSGRLKSFRPEPSGSSRESMGTKSASQPGSHGH
HREPYNAGNKRHFGNDDRGDWQRDRDRKYNYPGNSNQSWQGERHHQYDHNRYKDHYGDRR
PHGDMYRSSSGYRSNSSPRKRPYEQYSNDRDHRGSRPYYDRNPDPKRRRTEEFRPNYHQG
REVPPQDLRRMPEHRPAGPPGQDHYSRPFHPDKPPPLLDPRSPQAQKSPQDSRSPLERPV
ELNAAADPNWNNRNKT
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagagtgagaagcacgaggatgaaggatccactcggagcaatgcgtca
agcaattcagcttcagaggagtccaaccactctgcgtcagagtccggaagtcgctcagag
agcgagcatggcagcgtgaggaggagatcccacaactcagagtccaacagctcctcggag
tccgagagtcgctcggagtcagggagcgaatcagctgagtccaaatcccagcaaaacaca
gcggaagtcaaagacaagccagtcaggaagaaggagcgtctggctgatgtgaagaagatg
tgggaggagcatcctgatgtgtacggggtcaggaggtcaaaccgcagtagacaggagccg
gctcgtttaaacgtcggagctggggggagcagtgactctgagagcgagagtcccaagaga
aagacgtcacgggctaagaagaaagaaaatatctggaaagatgatgactcaaatgatgat
gatgaagaggaggaggaggaggaggaggcttccgacagtacagacagtgagcaggaagag
aaaaaaattagatccagacgacttcctgctagaagacctcagaccaaatcatcatccgtc
aaaaagcagatctctcagaagggaaaaaagtccagaaaagcggaatcatcgggtgaagac
gatgacaacgacgacgatgaagacgacgatgatgatgacgatgaggaagacactccaaag
aggcagacccgaggaaggggcgcaacgaaagtcaaaagttacaaagaggaccaacacgac
attgaaacagactctgatgacctgatagaaatgacgggggacgcaggcgaggagctgcag
gacgatgacagtgagacaattgagaaggttatggacaccaggatcagcaaaaaaggagcc
tccggagcttccacgaccttgtacgccgtctcggaaaatggggacccgagtgagggcttt
gacccagagaacgatgagggggagactcagcatctgatcaagtggaagggctggtcctac
atccacaacacatgggagagcatggactcactgatccagcaaaaagtcaagggactcaag
aaactggacaactacataaagaaaagcgaggagctcaattcatggttgaggagggcttca
cccgaggacgtcgaatttcataactgccaacaggagctcacttgtgacttgaagaagcaa
tttcagattgtggagcgtgtcatcgcaacgaaaacaggaaagacacctggaaccatagaa
tttccctctcatagccacaagatgccatcctccaatgagccggagtatctctgtaagtgg
atggggttaccttattcagattgcagctgggaagacggagcattggtcagaagtttgaag
tttgggagctgcatagacagcttcatcaaccgcaactcgaccaaaaccgtcccgtccaaa
gaatgcaaggtgttaaaacaaaggccgaggtttgttgctctgaagaaacaaccctcgtac
attggaagtgagaccctcgagctgagagattatcagctggatggcttgaactggctcgct
cactcctggtgcaggtgcaatagtgttatccttgctgatgagatgggactgggaaagacc
atccagaccatctctttcctgtcctacatgttccaccaccaccagctctacggacccttc
atattggtggtgcctctgtccacactcagctcctggcagagggagtttgagacctgggcc
ccggatatgaacgtggtggtctacctcggtgacgtcatgagcaggaaaacgatccgtgac
tatgagtgggtgaaccatcaaacgaaaagaatccggttcaatgcactattaaccacctat
gagattgtacttaaagacaagggtgtgctcgggaacataaactgggctttcatgggtgtg
gatgaagctcacaggctgaagaacgatgactccctgctgtacaaatcattaatggagttc
cggtccaaccacaggctcctcattaccggcactccgctgcagaactccctcaaagagctc
tggtccctgctgcacttcctcatgcctgacaagttccactcctgggagaattttgaggac
gaacatgggaaaggaagagacaatggttatcatagtcttcacaaagtcctcgagcccttc
ctcctccgacgcgtcaagaaagacgtggagaaatctctgcctgccaaggtggagcagatc
cttcgtgtcgacatgtcagcacagcagaaacaattttacaagtggattttaacaaggaat
tacagagctcttaccaagggcccccgaggcagctcctccggcttcctgaacatcgtcatg
gagttgaaaaaatgctgcaaccatagtttcctcattagacagcccgaggacggagacact
gagacacaacaggaacacctgcagagtttagtgaaaggcagcgggaagctggtgctgctg
gacaagctcctgaccagactccgacagcgaggaaaccgggtcttgatcttctcgcagatg
gtcaggatgttggacattctggctgaatacctcgccaagaaccgatacccattccagcga
ctggacggttccatcaagggagaaattcgaaagcaagcacttgaccactttaatgctgaa
ggatcagaggacttctgcttcctgttgtccaccagagccggaggtttagggattaacttg
gcctccgcagacactgttgtcatcttcgactctgactggaaccctcaaaacgacctgcag
gcacaagcccgggctcacaggatcggacagaagaaacaggtgaacatttaccggctggtc
accaaaggaacagtggaggaggacatcattgagagggcgaaaaagaagatggttttggac
catctcgtcattcagagaatggacaccactggtcggactgtactggacagcaactcagga
aacactaattcaaacccattcaacaaagaagaactgaccgctattctcaagtttggtgca
gaggaacttttcaaagaggccgagggagaggagtctgaaccacaggagatggatatcgaa
gagatcctgaggttggctgaaacaagagaaagtgacctgggctcaagtgctacagacgaa
cttctctctcagttcaaggtggctaatttctccagcatggaggagaccactcccgagctt
gacgacaaaacgataagcgagtgggacaacatcatccccgcggagcagcggcgcaaaatc
gaggaggaggagaagcagcgggagatggacgacatcttcatgctgcccagaagcaggagc
tcgaacaagagggctcgagccaatgacagcgacagtgatgtgggctccaagctgaagaac
cactcttcgggctctgagagcgagacggaagacagtgacgatgacaagaagccaaagaag
agaggaagacctcgagcccgcaaaaacaacgtggagggttttactgatgcagaaattcgc
aggttcatcaaggcatacaagaaatttgggtctccccttgaaaggttagaggcgatcgcc
cgagactctgagctggtggacaaatccatcgcggacctgaagagactcggtgaactgatc
catagcagctgtgtgactgcagtgcaggagcacgaggagcacctcaaagagaaccctgta
gaagccaaaggtcctgggaaacggcgagggattaatatcaagatctcaggagtgcaggtc
aacgccaagaccatcatccagcacgaggaagagtttgagccgctgcacaaagtggtgccc
tccaaccctgcagagagaaataagttccagctgacatgccgggtgaaggtggctcacttt
gatgtggactgggatctgcaggacgacactcagctcctgcttggcacctatgagcacggc
ttcggcaactgggatctcataaagacagatcccgacctgaaactggctgataaaattctc
cctgacgacccgagcaagaagcctcagggcaaacagttgcaggcgagagctgagtatctg
ctcaagctgctgaaaaaagaacaagacaatgcagacgtgtctaaaacaggggaggaggtc
aaagtgaagaagaggaagccccgggtgaaaaaggagaacaagattctcaaggatgagcag
ggcaacgacatctcctccccccgcctgtctgacaacccgtcagaggagggtgaagtcaag
gatgatggaacagagaagtccccgaacaagaagagacagaagaaaaaggataacaaagag
aacaaagaaaaacagggaacttctaagaaggagaaggacggggacaaagaaaagaagggc
accaagcccaagaaagaaaaggctaaaggagccaaagggaagaagacccaaggtccagtt
cacatcacagctggttctgaccctgttcccatcgaaggaaaggaggatgatgaactcgac
caggaaactttcagtatttgtaaggagcgcatgaggccggtgaaaaaggccctgaagcag
ctggataaaccagacgagggtctctctgaccaggagcagctccagcacacacgcacatgc
ctgctgaagattggagaccgcatcacagagtgccttaaattctacaacgacccagaacat
gtcaaaatatggcgacgaaatctctggatttttgtgtctaagtttacagagtttggagca
aggaagcttcacaagctttacaaaatggcccagaagaagcgatcacacgaggaagagaag
gagcagaagaagaaggacgattcttcagggaggctgaaatctttcagaccagaaccttct
ggttctagtcgagagtccatgggaaccaaatctgcatctcagccgggttcccacgggcat
cacagagaaccgtacaatgcgggcaataagcggcactttggaaatgatgatcgaggagac
tggcagcgggaccgggaccgcaaatacaattaccccggtaacagcaaccagtcatggcag
ggggagcgacatcatcaatatgaccacaaccgctacaaagatcactacggtgaccggcgt
ccacatggagacatgtatcgcagctcaagcggttaccgcagcaacagctcccctcgaaaa
cggccgtatgagcagtacagcaacgaccgggaccacaggggtagcaggccctattacgac
agaaatccggaccccaaaagaagacgcactgaagaattccgtcccaactaccaccaggga
cgagaggttccccctcaggacctcaggaggatgccggagcacaggccagcgggtcctccg
gggcaggatcactacagccgacccttccaccctgacaaacctcctccgctcttggaccct
cgctccccgcaggctcagaagtctccccaggattcccgctcgccactggagcgacctgtg
gagctgaacgcagcggcagaccccaactggaacaacaggaacaaaacataa
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integrated database retrieval system
