Hippoglossus hippoglossus (Atlantic halibut): 117762751
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Entry
117762751 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117762751
03036 Chromosome and associated proteins [BR:
hhip03036
]
117762751
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117762751
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117762751
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-C2H2_ZN142
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
117762751
NCBI-ProteinID:
XP_034443235
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Position
6:27449924..27465500
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AA seq
820 aa
AA seq
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MDAGPSEGVGEVEVHSQDAIVADLLQQAAEAGGVVEGQAGVVLEQGHGEEMVAAAQAQQQ
LMEAGVGVEDGPGVEMMVMDSLDPTLLQMKTEVIDAAVGGSSACSAHQATVTTVDQTQII
TLQVVNMEEQAALGLGELQLVQVPVSATTVEALQQGTFVDTTAMPKDGDPVICHTLPLPE
GFQVVKVGANGEVETVEQEEEGGQAHHEEEDEEVGNQLLEGEDGPIQTPNDDTNWAKDPD
YQPPSGMLKKTKKGKKSRLRYAEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPK
PTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHL
NTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSH
TGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN
VAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHERYALIQHQKSHKNEK
RFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFIPT
AFVCPKCSKTFTRRNTMARHSENCSGEVEDAENGTPTPKRGRRGRKRKMRSRRDDDDDSE
EDPVDPMRRKRVRERKNHHCYRKMRTQKAWNWTRPLPPSPSQPPTSHQSRGNEADPLRMP
LSLRHLSSQSEWAAKTTAAAAIIQVEDESTGAVENIIVKKEEGDTSAATPLEQGVALTVX
GVGLEGEGVETVELAVNEETAAAAANGDLTPEMILSMMDR
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagggccatcggagggtgtaggggaggtggaggtccacagccaggacgccatt
gttgctgacctcctccagcaagctgcagaggccgggggcgtggtagagggacaagctgga
gtcgtccttgaacaaggtcatggggaagaaatggtagcagccgcccaggcccagcaacag
ctaatggaggccggggttggtgtagaagatggaccaggtgttgaaatgatggttatggac
tcactggaccccaccttgctgcagatgaagactgaggtgatagatgctgcagtggggggg
tcatcagcttgttctgctcaccaagcaactgtaacaacagtggaccagactcaaatcatc
acactacaggtggttaacatggaggagcaggcagctttaggcctgggagagctgcagctg
gtccaggtgccagtttctgccaccactgtggaggccctgcagcaaggcacctttgttgac
accactgcaatgccaaaggatggagacccagtcatttgccacaccctgccacttccggag
ggcttccaggtagttaaggttggtgctaatggggaggtggagacagtggagcaagaagag
gagggaggacaagcccaccatgaagaggaagatgaggaggtggggaaccagctgttggaa
ggggaagatggacccattcagactccaaatgatgacacaaactgggctaaagatccagac
tatcagcctccatctggaatgttgaaaaagaccaaaaagggaaaaaagagtcgcctgcgt
tacgctgaaggcgataaggatatggacgtcagtgtctatgactttgaagaagagcagcag
gagggccttctgtctgaggtcaatgctgagaaagtggtgggcaacatgaaaccacccaaa
cctacaaagatcaagaagaaaggagtgaagaagacatttcagtgtgaactgtgcagctac
acctgccctcgacgctccaacctggacagacacatgaagagccacacagatgagagacca
cataaatgtcatttgtgtggaagagcctttaggacggtcaccttgctaagaaaccatctc
aacacacacaccggaactcgtccacacaagtgcacagactgtgatatggcttttgtgact
agcggagagctggttcgtcatcgtcgctacaaacacacacatgagaaacccttcaaatgc
tccatgtgcgactatgccagtgtggaggtgagcaaactaaagcgtcacattcgatcccac
actggtgagcgtccattccagtgcagtctctgcagctacgccagtagagacacgtacaag
ctgaagagacacatgaggacacactcaggagagaaaccttatgagtgctacatctgccac
gcccgttttacccagagtggaaccatgaaaatgcacattctgcagaaacacacggaaaac
gtggcgaaattccactgtccacactgtgacacggttatcgcacggaagagtgacttgggt
gtccatcttcgaaagcagcactcgtttattgagactggaaagaagtgtcgttactgtgat
gcagttttccacgagcgctacgctctgatccagcaccagaagtcccataagaacgagaaa
aggttcaaatgcgacatgtgtgactactgctgccgccaggagcgacacatggtgatgcat
cgtcgaacccacactggagagaaaccatatgcctgcagccagtgtgaaaaaaccttcaga
cagaagcagctgctggacatgcacttcaaacgctaccacgaccccaactttatccccacc
gccttcgtctgccccaagtgcagcaagaccttcactcgcaggaacaccatggcacgccac
tctgagaactgcagtggtgaggttgaggacgctgagaacggaactcctaccccaaagaga
gggagaagaggaagaaagagaaagatgaggagcaggagagatgacgatgatgacagtgag
gaggatcccgttgatccgatgaggaggaagagggtgagggagaggaagaatcatcactgc
tacaggaagatgaggacccagaaagcatggaattggaccaggcccctgccgccatccccg
tcccagcccccgacgagccaccagtcaagaggaaacgaggccgaccccctaagaatgccc
ctaagcctccgacacctatcaagtcagtcagagtgggctgccaagacaacggctgctgct
gccatcattcaggtggaggatgagagcactggagcggtggagaacatcatagtgaagaag
gaggagggtgacacgtctgcagcgacacctctggagcagggagtggccctgacggtgngg
ggggttgggctggagggggaaggggtggagactgttgagctggctgtgaatgaagaaacg
gcagctgctgccgccaatggcgatctaacgccagagatgatcctgagcatgatggaccgg
tga
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