Hippoglossus hippoglossus (Atlantic halibut): 117762778
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Entry
117762778 CDS
T07778
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117762778 (tdrd12)
Enzymes [BR:
hhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
117762778 (tdrd12)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117762778 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117762778
NCBI-ProteinID:
XP_034443256
LinkDB
All DBs
Position
6:26619110..26663047
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AA seq
1417 aa
AA seq
DB search
MLEMSILKVENPSCLWGRVVRCRGTNTETTEEYNSMLSQINLFYHDVTKDLCKLKPTSIE
EGQVCVVYWSVMKLWCRAVVESITMDSVSCKARCLLVDHGERLVIASDQIRVAVQNFLQL
PFWVKRFHLARIKPTTLRVCVYQENAELIPTAHWDSSATLYLHNLLQASTWTEAVLLESD
SDSTSIELYLTVGNIKICVNDDLVAKRFAYYTRESAESSGLDEVDRFPIMLSSSILTQSA
STTSSKPTAVTQPPAGKHTDVTASDRHQGRACDWLTAPYSPQSQQHELRTSNGDCRPNIT
EEQLSTGSQSRSSSQTAATESDSSDDTDSSLAAALTRNLSLFKFLKFLNPGSSYQQATHS
VGEIEELNDCQPKELTSASSPCTGQEDCKGSLVESGPAETKKMRSSELAGACSRLLEWLN
PEPLNPDPEAGDDAVVPSEPRSNGILVHSALPVQPCTSLDDAPITEALRLVLQRKQYNTL
SPADCYSWPAVSRGCNTIIVSHIADQPLSYLAPLLTHILLNSIFSSLTSSTGPIAVLLCP
GWEKVQQVYDLLEDFKITHMLHPIVLLLGVGKDEAKTIRIPKNCLLLVTTPFSFVRLLSC
HCFMFLRLHHLLLDEADQLFTFAPDEMEIILQHFQKVTSSEEKASSPLQLVAVAKRWTSQ
VEGLLTNHMPYPCIVMTVPEEAALYGNVQQFILMTLESSKISELLGMLDFSPDVGQKTLI
IANCAQEVEDVFKAVSHKSAFCLKTHEGLTYQFDFVIQQWRKNIGPGTHVILVTTNECLK
CFGIRDASCVIHYGFPTSPKLFGSRLFSMAENFRNLSERVSTQDQTASRPPVTRSVLLIS
ERNAPHVVGVVRYLGRTNALLPPELLSFGHGIHMAREDLKTNRPLCSYLKSFGVCRDSRT
CPDRHKFISQLDQSDLPAAGVIEVLPLYIKTASVFYGRIVRKDDNGFDGLASEMASYYAD
KKPGPSTELSEGGLYAVQEDNDFHRVKILSVPGRGDHLFFRVLVRFIDTGKEEEVKSHQI
LQLPEQFHSLSCQAVEIIVCRIKPVDAEIDWHPKVTRAISQKIRGLQHRARAVLSLGNTV
FVDPMVRVSQVPGMKTVINEYSVQSEILNTGMGVSNPEHLKLLRALCQEGEDSSSKEAGH
TYGLKDNSVSLEVRIKAEEEVLAEVFRAAEARKLSAPPQLEPCEPLNPVSPMNHTPVPAP
PACQLRLFPVFEQEALSEIQAADEQRYNHTPDLKSAKQMMRDGGELCPTTNLAACLNSCD
SGGNESKSQQVTISTNEKHYEKKSFHPQIRWYQTPDAMIVTVKLMNAESQRCDFYPDRVI
YSGRVNSQSYRAELELQGNIAVDRCCWEMKSNEPVLKLVKQQQGHWEKLLRNKNIFVSYD
MEHFEENEDKAPNGLWFVGNTGEDNCYVNSESGSESD
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaatgtcaattcttaaggttgagaacccctcctgtctctggggtcgggtcgtt
cggtgtcggggcactaacacagagacgacagaggagtacaacagtatgttgtctcagatt
aacctcttctaccacgacgttactaaggacctgtgcaaactgaagcccacgtcaatagag
gagggacaggtgtgtgtggtgtactggtcagtgatgaagttgtggtgtcgggccgtggtg
gaatcaattactatggactctgtgtcctgtaaagctcgctgcctgctggttgaccacggt
gaacgtctcgtcattgcttcagaccagattcgagttgctgtacagaacttcctccagctg
ccattttgggtgaagaggttccacctggcacgaatcaaaccaacaaccctgcgagtgtgt
gtttaccaggagaatgcagagcttattccgaccgctcattgggacagctccgctacgctc
tacctacacaacctgctacaagcgtcaacttggacagaggctgtgttgcttgaatctgac
tcagactccacctccatcgagctctacctaactgttggaaacatcaagatctgtgtgaat
gatgaccttgtggccaagaggtttgcatattacaccagagagtctgcggaaagcagtggg
ttggatgaggtggatcgatttcccatcatgttgtcctccagcatcttaacccagagcgcc
tccacaacctcaagcaagccgacagcagtaacacaaccacctgctggtaaacatacggat
gtgactgccagtgatagacatcagggtagagcatgtgattggctgacagctccctattcg
cctcagagccaacagcatgagctgaggacctctaatggagactgtaggccaaacatcaca
gaagaacaactgtctaccggcagccaatcacggagcagctctcagactgctgctacagag
agtgactcatcagatgacactgactcctctctggctgcagctctgaccagaaacctcagt
ttgttcaagttcctgaagtttctgaatcctggcagcagctatcagcaggcgactcacagt
gttggtgagattgaagagctgaatgactgtcaacctaaagagctgacttcggcctccagc
ccctgcacaggacaggaagactgcaaaggtagtttggtagagtcaggaccagcagagaca
aagaagatgaggagcagtgaattggccggggcttgttcacggcttttggagtggttgaac
cctgagcctctgaaccctgatccagaagctggagatgacgctgttgttcccagtgagccc
aggtcaaatgggattctggtgcactctgcgctcccagttcagccctgcaccagtttggat
gatgcccccatcactgaagctctccgcttggtgcttcagaggaagcagtacaacactctg
tctccagctgactgttacagctggccagctgtatctcgaggatgcaacaccatcatcgtg
tcccacattgctgaccagccgctcagctacctagcaccactcctcacccacatcctgctc
aactccatcttcagttccctcacctccagcacagggcccatcgcagtgctgctgtgtcca
ggctgggagaaagtccagcaggtgtatgacctgctggaggatttcaagatcacccacatg
ctccatcccatcgtcctgctgctgggtgttgggaaggacgaggccaagactatcaggatc
ccgaagaactgcctgctgttagtgaccacaccctttagttttgtccgtctgctgtcttgt
cactgcttcatgttcctgcgtcttcatcacctgctgttggacgaggccgaccagctcttc
actttcgctccggatgagatggagatcattttgcagcatttccagaaggtgacctccagc
gaggagaaggcctccagtcctctgcagcttgttgccgtggcgaaaagatggaccagtcaa
gtggagggattgttaaccaatcacatgccctacccctgcattgttatgactgtccctgag
gaagctgctctctacggtaacgttcagcagttcatcctcatgactctagagagcagtaag
atctcagaactgttggggatgttggatttcagcccagatgttggccagaagactctgatc
atagccaactgtgctcaggaagttgaagatgtgttcaaggccgtgagtcacaaatctgct
ttctgcctcaagactcacgaggggttaacataccagtttgactttgtcatccagcagtgg
aggaaaaacatcgggcctggaactcatgttattctggtgaccaccaacgagtgtctgaag
tgttttggaatcagagatgcatcttgcgtcatccactacggtttccccacttctcccaag
ctgtttggcagtcgactcttcagcatggctgaaaacttcagaaacctctcagaacgggtt
tccacccaggatcaaacagcgagccgccctcctgtcaccaggtcagtgctgttgatctca
gagaggaacgctcctcatgttgtgggggttgtgcgttacctgggacgaaccaacgccttg
ctgccccctgagctactgtctttcggccatggcatccatatggccagggaggacctgaag
accaacaggcctctctgcagctacctgaagagctttggagtctgcagagacagtagaaca
tgtcccgaccgtcacaagttcatttcccagctggatcagtccgaccttcctgcagctggg
gtcatagaagttttacctctctatatcaagacggcatcagtcttctatggtcgcatcgtc
aggaaagatgataatggttttgatggcttagcatctgagatggcttcttactatgctgat
aagaaaccaggacccagcacagagttgtcggaaggaggcttatacgctgtgcaggaggac
aacgacttccacagggtgaagatcctctctgtcccaggcagaggtgaccacttgtttttc
agggtcttagtgcggtttattgacactggaaaggaagaggaggtgaaatcccatcagatc
cttcagctgccggagcagtttcactctctgtcctgccaggctgtggagatcattgtctgc
cgcatcaaaccagttgatgccgagatcgactggcacccaaaggtcaccagagccatcagt
cagaagatccgaggtctgcagcaccgtgccagagcagttctcagtctgggaaacactgtc
tttgttgatcccatggtacgggtgagccaggtgccaggtatgaaaactgtcatcaacgaa
tatagtgtccagtctgagattctgaatactggaatgggagtcagcaacccggagcatcta
aaactgctgagggcactgtgccaggagggtgaagacagcagcagcaaagaggcaggccac
acatatgggttgaaggacaactcggtgtctcttgaagtcaggatcaaagctgaggaagaa
gttctggctgaagtcttcagagcagccgaggccaggaagctctctgctcctcctcaactc
gagccatgtgagccattaaacccagtatctccaatgaaccacaccccagtcccagcacca
ccagcttgtcaactccgcctgttcccagtgtttgagcaggaagctctctcagaaattcag
gctgcagatgaacagagatacaatcacactcctgatctaaagtcagctaaacagatgatg
agagatggaggagaactttgtcccacgaccaacctggctgcttgtctcaactcctgtgat
agtggtggcaatgaaagtaaaagccagcaggtcaccatcagcactaatgaaaaacactac
gagaaaaaaagtttccatcctcagatccgctggtaccagacacccgacgctatgattgta
acagtgaagctgatgaacgcagagagtcagcgctgtgacttctaccctgacagggtcatc
tacagtggcagagtgaacagtcagtcctacagagctgagctggagcttcagggcaacatc
gctgtggaccgctgctgctgggaaatgaagtccaatgagccagtcctcaaactggtcaaa
caacagcaggggcactgggaaaaactactcaggaacaagaatatttttgtgagttatgat
atggagcattttgaagagaatgaagacaaagcaccaaatggtctgtggtttgtggggaac
acaggagaggataactgttatgtgaactcagagagtggcagtgagagtgactga
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integrated database retrieval system
