Hippoglossus hippoglossus (Atlantic halibut): 117762873
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Entry
117762873 CDS
T07778
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117762873
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117762873
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
IFT20
GAS
Motif
Other DBs
NCBI-GeneID:
117762873
NCBI-ProteinID:
XP_034443456
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Position
6:16264448..16281768
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AA seq
1179 aa
AA seq
DB search
MERFQSSMRKRLYSLPQNIGQKAFVIDEGDSGDKDTKRKSIRLKHLSPPSPASSCRSFEE
ARSEDLERDVIVKTNLNGDCRRFRGSISSITGRHPLGSDPAEQRRLIPEADAWVGESFPD
ESGPGAQQRAAGGPSGAAGQGSVFDQSTFIKLEDAEQILPEDDRLYQAGFMHRQFGAMLQ
PGVNKFSLRMLGSERAVEHERERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVG
ITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPQKIKIKYLKSWFV
VDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEE
VFHMTYDLASAMVRIMNLIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVTRNKMVNDTWGQ
QYSYALFKAMSHMLCIGYGLYPPIGMADVWLTILSMIVGATCFAMFVGHATALIQSLDSS
RRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILEELNEPLRQEIIN
FNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPVDYIIREGTIGKKMYFIQHGVVSVL
TKNSIDMKLSDGSYFGEICLLTRGRRTASVRADNYCRLYSLSVDNFDEVLEEYPMMRRAF
ETVAVDRLDRIGKRNSVLQHKVQHHQSSGTLNLQESEIIQRIVQHDRDMAQCTQLIQTSD
AQSLIPLPASPSPTPVIWASLVQAPLQAAATTTPLALALAQHSHLPPILFHHPLVPGSGS
VKDPSCHPRRVHVGANTSSICGSGHGSPTSSTLRTQHLSTGPVSPVLMSQPIFTSSLQPL
TPLPMHQLTPLPPPHPPHSGIASVFPISQATVSYTCSAQLHPQPFHGAMTTPHYPIGFFQ
QGAPGRLGGRFPAPSASYISPLISSSVDPILSHLQQTTHATLQQMRSSHDRAGRTPSGLN
LPTFPFITSTQSSSGFMQPVSAVGAGAAASLAQHSLAGLQSVFLPQVLPEHSALASLAQY
GSAEASPCYTPPVQSPRIQSPVRGRTVYQSELPSTMGSHCPLTPQTSYPARVACTLKERA
ESSVNLFTQEIKTISGSNSSIHQERPPSEGAAGASSPFSSPMAVSKPYSSIPGQATPVSR
THSASEHQNQSAGVHSPHVRSPAKILETEQKQSKLPSNL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggttccagtcgtccatgcgcaaacggctctacagcttgccgcaaaacattggg
caaaaagccttcgtgattgacgaaggagacagcggcgacaaggacaccaagaggaaaagt
atccggctaaaacatttgtcccctccgtctcctgccagcagctgcaggagctttgaggag
gccaggagcgaggacttggagagggacgtgattgtgaagaccaacttgaacggggactgt
cgccggttcaggggcagcatctcctccatcaccgggcgccatcctctggggtcagacccg
gcggagcagcggcgcctcatccccgaggcggacgcctgggtcggtgagagtttccccgat
gagagcggccccggggcccagcagcgggcagcgggtggtccgagtggcgcagccgggcaa
gggtccgtgttcgaccagtcaactttcatcaagttggaggacgccgagcaaatcctaccc
gaagatgaccggctgtaccaagccggcttcatgcaccggcagtttggggcgatgctccag
ccgggtgtcaacaagttctccctgcggatgttggggagtgagagggccgtggagcacgag
agggagcgagtaaagtctgcgggcttttggataatccacccgtacagtgattttaggttc
tactgggatctgaccatgctgctgctgatggtgggaaacctcatcatcatccccgtgggc
atcaccttcttcaaggacgagcacacgccgccctggatcgtcttcaacgtggtgtccgac
accttcttcctcatggacctggtcctcaacttccgcacgggcatcgtgaaggaggacaac
acggagatcatcctggacccacagaagatcaagatcaagtacctgaagagttggttcgtg
gtggacttcatctcctccataccggtggactatatcttcctcatcgtagaaacgcgcatc
gactctgacttctacaagacggcccgggccctgaggatcgtccgcttcaccaagatcctc
agtctgctgcggctgctgcgcctctccagactcattcgctacatccaccagtgggaagag
gttttccatatgacctacgatctggccagcgccatggtgcgtatcatgaacctgatcggt
atgatgctgctgctgtgtcactgggatggctgtctacagttcctggtgcccatgctgcag
gacttcccccatgactgctgggtcaccagaaacaagatggtgaatgacacgtgggggcag
caatactcctacgccctgttcaaggccatgagtcacatgttgtgcatcgggtacggcctc
tacccccccatcggcatggctgacgtgtggctcaccatcctcagtatgatcgtgggggct
acctgctttgctatgtttgtggggcatgcgactgcactcatccagtctctggactcctcc
aggaggcagtaccaagaaaagtataaacaggtggagcagtacatgtccttccacaagctc
ccggccgacatgcgtcagaggatccatgactactacgagcaccgttatcagggcaagatg
tttgatgaggagagcattctggaggagctgaacgagccactgcgacaggaaatcatcaac
tttaactgtcgtaaacttgtggcctccatgcctctgttcgccaacgccgatccaaacttt
gtcacctccatgctcaccaaactgcgcttcgaggtcttccagccggtcgactacatcatc
agagagggaaccatcggcaagaagatgtacttcatccagcacggtgtcgtgagtgtcctg
accaagaacagcatcgacatgaagctgtctgatggctcttattttggagagatctgcctg
ctgacccgaggcaggaggacagccagtgtgcgagcagataactactgtcggctgtactcg
ctctcggtggacaacttcgacgaggtgctggaggagtatcccatgatgaggagagccttc
gagactgtggctgtcgaccgcctggaccgaatcggtaagaggaactctgttcttcagcat
aaagtccagcatcaccaaagctctggtacgctaaacctccaagagagtgagatcatccaa
agaatagtgcaacacgatcgtgacatggcccaatgcacacagctgattcagaccagcgat
gcacagagtctcatccctcttcctgcttccccgtcacccaccccagttatctgggcctcg
ctggttcaggccccgctccaggctgctgcgaccaccacccctctggctctggccttggcc
cagcactcgcatcttcctcccatcctcttccaccatcctctggtcccaggctctggttct
gtgaaggaccccagctgtcatccaaggagagtccatgttggagcgaacacctccagcatc
tgtgggtcagggcacggttctcccaccagctccaccctaaggacccagcatctgtccact
gggccagtgtcgcccgtactgatgtcccagcccatcttcaccagcagcctgcagcccctc
acccctttgcccatgcaccagctcacacccctgcccccgccccatcctccccactccggc
attgcctcggtcttccctatcagccaggccaccgtctcctacacctgctccgcccagctc
cacccccagcccttccacggtgctatgaccaccccacactaccctatagggtttttccag
cagggggcaccagggaggctaggagggagattcccagccccctccgcctcctacataagc
ccactgatctccagctcagtcgaccccattctaagccacctgcagcagaccactcacgcc
acactgcaacagatgaggtccagtcatgacagagcagggaggacgcccagtggtctgaac
ctcccaactttccccttcatcaccagcacccagtcctccagtggatttatgcagccagtg
tctgcagtcggagccggagccgctgcctctctggcccagcacagcctggcaggcctccag
tctgttttccttccccaggttcttcccgagcactcagcgctcgcctccctggcccagtac
ggctctgcagaggcgtctccctgctacacgcctccagtccaaagtcccagaatacaaagc
cctgtgagggggaggacagtttaccaaagtgagctccccagcaccatgggctctcactgc
cctcttacccctcagacctcataccctgccagggtggcttgtaccctcaaagagagggca
gagtcctcggtgaatctctttacccaggaaataaagactatctcaggctctaacagctct
atacaccaggaaaggcccccctcagagggagcggcgggggcgtcgagccccttctcctcc
cccatggccgtcagcaaaccctacagttccatccctggtcaggccactcctgtcagtcgg
actcattcagcgtctgaacatcagaaccagtctgctggcgttcactctccccacgttaga
tctcccgctaagatattagagaccgaacagaaacagtccaaacttccctccaacttgtga
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