Hippoglossus hippoglossus (Atlantic halibut): 117762963
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Entry
117762963 CDS
T07778
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117762963 (ppfibp2b)
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117762963 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
LRRFIP
FxsA
Troponin
AAA_13
PaaX_M
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
117762963
NCBI-ProteinID:
XP_034443629
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All DBs
Position
6:2299222..2355782
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AA seq
1052 aa
AA seq
DB search
MLPAITMETEASHMLEAALEQMDDIIAGSKAAAVDFSHNMYDLGSPMSAGPLQVVQLAED
LKLALELQPSQEERDSVRAQIQTETAQALIHWLQSGAVNLCSPVSNETYQDRLLRLEGDK
ESLVLQVSVLTDQVEAQGEKIRDLESSLEEHRQKLASTEEMLQQELISRTSLETQKLDLM
DEVSCLKLKLVGMEDTHTDTQPQDAVDTKQNKAECVVNLISELQEQMCRFQAEISTRIQE
KRALEEREAQQGEPRGSQAQGQDPQLGLAGSDLSLPGPDAWMHNGGQTVHDLLREVNQLK
NKVDELEGEKSRYEKKLRATKAEISELQQLLASRDAEIECLQTQLLARDGSANAEREEVY
IKQLINKYQEYQRLKVGMESLLASNDEKDRRIEELTILLSQYRKMREVLALTQGSSEEEL
SGTLKLRAITHKAHSDILRSEISSRGSSPLMLSSSPYQRELDLSLQNSMDTSLVSTADTS
FFNGSWHQRRLLSSSLEELQSGSLQKAVEIQPAESESDVGAENPDLELSKYQTLPGKRSK
KSERRPEMNGDGEYSSPVQLSPVHSPEQDYRLIRCRSASAPALGSPGKHDLYDVGHPDKL
DEFVLSDQSPLSSGVDSGQQSPVSPENRKSHRGIKKLWGKIRRSQSGSPVQVQDPELGEF
KRGGFRATAGPRLARSGNTRDLKLPFSKWSTDQVCDWLEDIGLGQYAAFARHWVTGGQTL
LSATPQDLEKEMAMKNPLHRKKLLLAVKTFSSKQPEKSAELDYIWVTRWLDDIGLPQYKD
QFNEGRVDGQMLQFLTVNDLLFLKVTSQLHHLSVKCAIHVLHVNKFNANCLKRRPGTENQ
FSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIMLEPRFNSDTLALLLNIPPQ
KTLLRRHLTTNFDNLVGGQAQQEKREYTEAAGCAPLSIAAKVKPKKLGFSNLTHLRRRRA
DESTDYVCPIESPSPQSGQPVANGTQMRPYSGFRGLSPILDREPDQSRDQMASTEGTMLQ
IEALSESINNLTLLLSREELQKEMRLPQAALV
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccgccatcaccatggaaaccgaggccagtcacatgctggaggcggcgctggag
cagatggatgacatcatcgcaggttccaaagcagcagccgtggacttttcccacaacatg
tatgacctgggttctcccatgagcgccggcccgctgcaggtggtccagttggccgaggac
ctgaaactcgccctggagctccaacccagccaggaggagagagacagtgtgagagcacag
atacaaacagagacggcccaggctcttatccactggctgcagagcggagctgtgaacttg
tgttctccagtcagcaatgaaacctaccaggaccgactgctccgcctagagggggacaag
gagtctctggtgctgcaggtgagcgtcctgaccgaccaggtggaggcgcagggcgagaaa
atccgagacctagaaagttctctggaggaacaccggcagaaactggcctccactgaggag
atgctgcaacaggagctgatcagcaggacgtctctggagactcagaagctggatctgatg
gacgaggtgtcctgcctcaaactgaagctggtcggcatggaggacacgcacacagacaca
caaccgcaggatgctgtggacacaaagcagaacaaagccgagtgtgtggtaaatctcatc
agtgagctccaggagcagatgtgcaggtttcaggcagagatcagcactcgcatccaggag
aaacgggccctggaggagcgggaggcccagcagggggagcccagaggcagccaagcccag
ggccaggaccctcagctggggttagccggctctgacctcagcctgcccggccctgacgcc
tggatgcacaatggaggacagactgtacacgatttgttacgagaagtgaatcagctgaaa
aacaaagtggacgagctggagggagagaagagtcgatacgagaaaaaactccgagcgacg
aaggctgagatctccgagctgcagcagctcttggcctccagagacgcagagatcgagtgc
ctgcagactcagctgctcgccagagacggctcggccaacgcagagagagaggaggtgtat
atcaagcagctgattaacaaataccaggaataccagaggctgaaggtggggatggagtct
ctgttggcgtcaaatgatgagaaggatcgtcgtatagaggagctgacgattctcctcagc
cagtacaggaagatgagggaggtcctcgctctcactcaggggagcagtgaggaggagctg
agcggcactttgaagctcagagccatcacacacaaagctcactctgacatcctccggtcg
gagatctcatcaagaggatcttctccactgatgttatcgtcatcaccgtaccagagagaa
ctggacttaagcctccaaaactcaatggacacctcgttggtgtcgactgcagatacgagc
ttcttcaacggttcctggcatcagcgcaggttgttgtccagcagcctggaggagctgcag
agtggatccttacaaaaggctgtagagatccaacctgctgagagtgaatcagatgtaggg
gcagagaatcctgacctggagctgagcaagtatcagactctacctggaaagcgaagtaaa
aagagcgagcggagacctgagatgaacggagacggagaatactcgtctcccgtgcagctc
tctcctgttcacagccccgagcaggactacaggctgatccgctgcaggagtgccagtgct
ccggctttaggatctcctgggaaacacgacctctatgatgtcggacatccagacaagctg
gacgagttcgtcctctcagaccagtcccctctgtcctccggggtggactctggacaacag
tcgccggtctcaccggagaacaggaagagtcacagaggcattaagaagctctgggggaag
atccgccgcagccaatcaggaagccccgtccaggttcaggacccggagctgggagagttt
aagagaggaggcttcagagccacagctggaccacgactggcccggtcagggaacacacga
gacctgaagttgcctttctccaagtggagcacagatcaggtgtgtgattggctcgaggac
attggactcggccagtacgccgcctttgctcgccactgggtcaccggcggtcagactctc
ctgtcggccaccccacaggacctggagaaggagatggcgatgaagaatcctctccacagg
aagaagctgcttttggccgtcaagacgttcagcagcaagcagccggagaagtccgcggag
ctcgattacatctgggtcacacgttggctcgacgacatcggcctccctcagtacaaggat
cagttcaatgaaggacgagtggacggacagatgctgcagttcctcaccgtgaacgactta
ttattcctcaaagtgacgagtcagctccatcacctcagcgtcaagtgtgcgattcacgtt
ctccacgtcaacaagttcaacgccaactgcctcaagcgaaggccaggcaccgagaaccag
ttctctcccagtgaagtcgtccagtggtccaaccaccgggtgatggagtggctgagatcc
gtggacctggcggagtacgctccgaacctgcggggcagcggcgtgcacggagggctcata
atgctggagcctcgctttaactccgacacgctggccctgttactgaacatccctcctcag
aagacgctgctgagacgccacctcaccaccaacttcgacaacctggtgggaggccaggcg
cagcaggagaagagggagtacacggaggcggcgggctgcgcccccctcagcatcgcggct
aaagtgaagccaaagaagttgggtttctcgaacctgactcacctcaggaggagacgagcg
gacgagtccacggattacgtctgtcccatcgagtcgccctcgcctcagtcgggacagccc
gtggcgaacgggacacagatgcgcccgtactccggcttcaggggcctgagccccatcctg
gaccgggagccggaccagtccagggaccagatggcgagcacagagggcaccatgttgcaa
atagaagctctgtctgaaagcatcaacaacctcacactcctgctcagccgggaggagctg
cagaaggagatgaggcttcctcaggcggcgctcgtttga
DBGET
integrated database retrieval system
