Hippoglossus hippoglossus (Atlantic halibut): 117763023
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Entry
117763023 CDS
T07778
Symbol
ckap5
Name
(RefSeq) cytoskeleton-associated protein 5 isoform X1
KO
K16803
cytoskeleton-associated protein 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117763023 (ckap5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117763023 (ckap5)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117763023 (ckap5)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
XMAP215
117763023 (ckap5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XMAP215_CLASP_TOG
CLASP_N
CEP104-like_TOG
HEAT
HEAT_GCN1
HEAT_MROH2B_C
HEAT_EF3_N
TOR1L1_N
HEAT_2
HEAT_ECM29
TPR_CAND1
TAN
VHS
Motif
Other DBs
NCBI-GeneID:
117763023
NCBI-ProteinID:
XP_034443739
LinkDB
All DBs
Position
6:1803200..1825144
Genome browser
AA seq
2065 aa
AA seq
DB search
MGDDSEWLKLPVDQKCEHKVWKARLSGYEEAVKLFQKIRDEKSPEWGKYLGLLKKFVTDS
NAVAQLKGLEAALVFVENAHVAGKTTGEVVSGVVTKVFNQPKARAKELGADICLMYIEIE
KAEVVQEELLKGLDNKNPKIVVTCMDTLRKALSEYGSKIVTLKPIVKILPKQFESREKAV
RDEAKLLAVEIYRWIRDAIRPSLQTINSVQLKDLEEEWVKLPTSAAKQTRFLRSQQDLKA
KFEQHSAEGGADSDGDDEADTVAAVDPYELLEAVDILAKIPKDFYDKIEAKKWQERKEAL
EAVELLAKKPKLENGDYGDLVRALKKVVGKDANVMLVSLAAKCLAGLASGLRKKFGTYAG
QVVPTILEKFKEKKPQVVQALQEAIDAIFLTTTLQNLSEDILSVMDNKNPSIKQQASLYL
ARSFRHCTQATLPKSVLKPFCAALVKQVNDSAPEVRDAAFEALGTAMKVAGEKAVNPFLA
DLDKLKLDRIKESADKVELPGGRKGGGGGGGAGDKKSAAKAPPTAEAPPKSSAPPRKNPA
AATSKSVSGPPKKGKPTSAAGGKAKKTSDNKEVIETELSIEACEDLAGGVLPASCLQQLD
SANWKERLASMEEFQRAAETMDKGQMPCQALVRMLAKKPGWKETNFQVMQMKLHIVALIA
QKGQFSKTSANVVLDGLVDKVGDVKCGGNAKEGLTAIGEACSLPWTAEQVVSIAFGQKNP
KNQAETLNWLANAMKEFGFAGINVKGFINNVKTALGATNPAIRIAAITLLGVMHLYMGAP
LRVFFEDEKPALLAQIDAEFEKMQGQSPPAPIRFNKKAAAEEAGDDGEEQDEDGGAAGGG
GQDSMDLLPRTDISEKITSDLVSKIGDKNWKIRKEGLDEAKAIIVEANFVTTNIGELPLT
LKERLGDSNKILVQQTLNILQQLATAMGPGLKQHVKALGFPIITVLGDSKSNVRAAAMIT
LQAWVEQTGMKDWLEGEDLSEELKRENPFLRQEVLGWLAEKLPTLRTVPGDLMLCVPQLY
ACLEDRNGDVRKRAQDALPKFMMHLGFEKMTKAAGKLKTSSKDQVVAMLEKARAVMPAKP
AAPTKAGGGKDSAEPSRSASASRSQPASDDCVDSKPEVKKIRGGAAAKKPPSSPEEPVPP
PPSKDKDSNASKKPSSKGKAAAGSQQGAAGKKPPAKGVKDEEDKSGPIFVLIPNAKEQRV
KDEKQLKILKWNFNTPRDEYLEQLKTQMSTCFAKWLQDELYHFDFQRHVKAIGVMIERLE
SESDATISCLDLILKWFTLRFFDTNTTVLMKVLEYLKLLFAMLNAENYHLTEYEANSFIP
YLILKVGESKDGVRKDVRTILTMLCKVYPASKVFPLLMDGTKSKNSKQRAECLEELGCLI
EGYGMNVCQPVPAKAMKEIAVHIGDRDTSVRNAALNTVVAVYNACGEQVYKLIGNLSEKD
MSMLEERIKRSAKKAAAAPAKPSVAERTQKENPTNPNATFLRKPAQEDPNKLKIMYRTYR
IQARQNSQHSESSHPSIPREFQLDLDMIERDQSRVCEMPDLVQHKLDELLEPIMIPEPKI
HSVSPHFDELHNSTASTINFVISQVASGDINTSIQALAQIDEVLRQEDKAEVMSGHIDQF
LIATFMQLRLINSTHMADERLDKRDIIKLYSCIIGNMLSLFSMESLAREASMGVLKDLMH
GVITLMLDSRVEDMEDGQQLIRSTNLLVIRVLEKSQQTNMISALLVLLQDSLVTTAGPPK
FSELVMKCLWRMTRHLPETIDSINLDRILLDVHNFMKVFPKEKLKQLKNDVPHRTLKTLL
HTLCKLTGPQILDHLSMIENRNESELEAHLRQVVKHSGNLSGLKSDRGNEKGGLRTDERM
SKAKVSDILSEIFKKIGSKENTKEGLTELYEYKQKYSDADLEPFLKNTSQFFQSYVERGL
RMIESEREGKSRIQTSAVIPQHGVDSSLTSNNEELKPAVYYERLKILRQRQGLENTSRQG
GGGVEDEPQQRPPISSLLSSKPSVASSTDMLHSKLSQLKESREMYQQEHNAHSNSPSHTH
TRSASPAANLDDLKKRLERIKSNRQ
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgatagcgagtggctgaagcttcccgtcgaccagaaatgtgaacacaaggtg
tggaaagcccgtctgagcggttatgaagaagctgtgaagttgtttcagaagataagagac
gagaagagtccagagtgggggaagtacctcggactcttaaagaagtttgtcacagactcc
aacgctgtggctcagctcaaaggccttgaggcggctctggtttttgtcgagaacgctcat
gtagctggcaagacgaccggtgaggtggtgtcgggcgtggtgaccaaagtgttcaaccag
ccaaaggcccgggccaaggagctgggcgccgacatctgtctgatgtacatcgagatcgag
aaggccgaggtggttcaggaagagctgctgaagggactggacaacaagaaccccaagata
gtggtgacctgcatggacacgctcaggaaggctctcagtgagtatggatccaagattgtg
acgctgaaaccaatagtgaagattttaccgaagcagtttgagtccagagagaaggcggtg
agagacgaagctaagctgctcgctgtggagatctacagatggatcagagatgctattcga
ccttcactgcagaccatcaactctgtacagctgaaggacctggaggaggagtgggtgaag
ctccctacttctgctgccaagcaaacaaggttcttgcgttcgcagcaggacctgaaggca
aagtttgagcagcatagtgctgaaggaggagcagattctgatggagacgatgaagcagac
actgtggcagcagtggatccgtatgagctgctggaagctgtggacattctggccaagatt
cctaaagacttctacgacaaaattgaagctaaaaagtggcaggaaaggaaggaagctctg
gaggctgtagagcttctggccaagaagcccaaactggagaatggagactatggagacctc
gtccgagcactgaagaaggttgtgggaaaagatgccaacgtgatgctggtgtcgctggca
gcaaaatgtctggccggactcgcctctggtctcaggaagaaatttggaacatatgccgga
caagtggttccaactattctggagaagttcaaggagaagaagcctcaggtcgtccaggcc
ctgcaagaggccattgatgccatcttcctcactaccactctacagaacctttctgaggac
atcctctctgtgatggacaataagaatccctccatcaagcagcaggcctccctgtatcta
gcccgctccttcagacactgcacacaggccactctgcccaagagcgtcctcaaacccttc
tgtgctgctctcgttaagcaagtgaacgactctgctccagaggtgcgtgacgctgcgttt
gaagctttggggacggccatgaaggtggctggagagaaagctgtgaaccccttcttggcc
gacttggataaactcaaactggacaggataaaggagagtgctgataaagtggagctccct
ggagggaggaaaggtggaggaggcggtggcggagccggggacaagaaatctgctgctaaa
gcccctcccactgctgaagcccccccaaaatcctctgccccacccaggaagaacccagcc
gctgctaccagcaagtcggtgtcaggtccacctaagaaaggcaaacccacgtctgcagct
ggaggaaaagccaagaagacgtctgacaacaaagaagtgatagagaccgaactgtcgatc
gaggcgtgtgaggacctggcaggaggcgtacttcctgcttcctgtctgcagcagctggac
tcggccaactggaaggagaggctggcgagtatggaggaattccaacgggccgctgagacc
atggataaggggcagatgccctgtcaggctttagtcaggatgttggccaagaaaccaggt
tggaaggagactaactttcaggtgatgcagatgaagctgcacattgtggctcttattgct
cagaaaggacagttttcaaagacgtcggccaacgtggttttagacggattggtagacaaa
gtcggagacgtcaaatgtggtggaaacgccaaagagggactgacggcgatcggagaggcc
tgctcgctgccgtggactgcagaacaggttgtctcaattgcgtttggacagaagaacccg
aaaaaccaggcggagactctcaactggctggcgaacgccatgaaggagtttggctttgct
gggatcaatgtgaaaggtttcatcaacaacgtgaagactgctctgggagcgaccaacccc
gctatccggatagcagccatcaccctgctgggagtcatgcacctctacatgggagctccc
ctgcgagtgttctttgaagacgagaagccggctctcctcgcacagattgatgcagagttt
gaaaagatgcagggccagtcgcctccagctccaatcagattcaacaagaaggcggcagcg
gaggaggcgggtgatgacggagaggagcaggatgaggacggaggagcagcaggaggagga
ggacaggacagcatggacctgctgcccagaacagatatcagtgagaagatcacgtccgac
ctggtgtctaaaattggcgataagaactggaagatcaggaaggaggggctggacgaggca
aaggccatcatagtggaggccaatttcgtcacaaccaacatcggagagctgcctctgacc
ctgaaggaacgactcggagattccaacaagatcctggtccaacagactctgaatatcctg
cagcagctggctacagccatgggacctggactcaagcagcatgtcaaagcactgggattc
cctattatcactgtactgggagacagcaagtctaatgtgagggcggccgccatgattact
ctgcaggcgtgggtggagcagacggggatgaaggactggctggagggagaagacctgtca
gaggagctgaagagagaaaatccctttttgcgacaggaggtgctcggctggttagcggag
aagctgcccaccctgaggacggtgcctggggatctgatgctgtgtgtccctcagctttac
gcctgcctggaggacagaaacggagacgtgaggaagagggctcaggacgccctgcccaaa
ttcatgatgcacctgggctttgagaaaatgaccaaggctgctggcaaactcaaaacttcc
tctaaggatcaggtggtagccatgttggaaaaggccagggcagtgatgccggccaaaccc
gccgctcccaccaaggcaggaggagggaaagactctgcagagccaagcagatctgcttca
gcctccaggtctcagccagcgagcgacgactgtgttgacagtaaacctgaagttaagaag
atccggggaggagccgctgccaagaagcctccctcctctcccgaggaacccgtccctccc
cctccctccaaggacaaggacagtaatgctagtaaaaagccctccagcaaagggaaggct
gctgctggcagtcaacagggcgccgctgggaagaagcctcctgccaaaggcgtgaaggat
gaagaagataagtccgggccgatcttcgtcctcatccccaacgctaaggaacagagggtc
aaagacgagaagcaactgaagattttgaagtggaacttcaacacccctcgggatgaatat
ctggagcagctgaaaactcagatgtccacctgctttgcgaagtggctgcaggatgagctt
taccactttgactttcagagacacgtcaaggccataggagtcatgatcgagaggctggag
agtgagagcgacgccaccatcagctgtctggacctgatcctgaagtggttcacgctgcgc
ttctttgacaccaacaccacggtgctgatgaaggtgctggaatatctgaagctgttgttt
gccatgttgaacgcagagaactaccacctgactgagtacgaggccaactccttcatcccc
taccttatactcaaggttggagagtcaaaggacggggttcgcaaagacgtgcggaccata
ctgaccatgctgtgtaaagtctacccagcatccaaggtcttccctttgctcatggatgga
actaagtccaagaactccaaacagagagctgaatgcctggaggagctgggctgtttgata
gagggctacgggatgaatgtttgccaaccggttccagccaaggctatgaaggagattgct
gttcacatcggtgacagagacacgtccgtccgcaatgccgccctgaacactgtggtggcc
gtctacaacgcctgtggggagcaagtttacaaactgattggaaatttgtcagagaaagac
atgagcatgctggaggagagaatcaagcgttcagccaagaaggccgccgcagctccggcc
aagccgagtgtggcggagagaactcagaaggagaacccgacgaaccccaacgccaccttc
ctccgaaagccggcacaggaagaccccaacaagctcaaaataatgtatcgcacgtatagg
atccaagcccgtcagaacagccagcacagcgagtcctcccacccctccatccccagggag
ttccagttggacctggacatgatcgagagggaccagagcagagtgtgcgagatgccagac
ctcgtccaacacaagctggacgagctgttggagccgatcatgatccccgaacccaagatt
cattctgtctctccacactttgacgaactccacaacagcacggcctccaccatcaacttt
gtcatctctcaggtggccagcggggacattaacaccagtatacaggccctggcacagatt
gacgaggtgctgcgacaggaggacaaagccgaagtcatgtcgggacacatcgaccagttc
ctcatcgctaccttcatgcagctgaggctcatcaacagcacgcacatggccgacgagcgg
ctggacaagagagacatcatcaaactgtacagctgcatcataggcaacatgctgtctttg
ttctcgatggagtccctcgccagagaggcgtcgatgggcgtgttgaaggacctgatgcac
ggcgtgatcacactgatgctggacagcagggtggaggacatggaggacggacagcagctc
atcagatccaccaacctgctggtgatcagagtgctggagaagtctcaacagaccaatatg
atcagcgctctgctggttttgcttcaggacagtttggtcacgacagccggtcctcccaag
ttctctgagctggtcatgaagtgtctgtggaggatgactcgccatctcccagagaccatc
gacagcatcaacctggatcggatcttactggatgtccacaacttcatgaaggtgtttccc
aaagagaagctcaagcagctgaagaacgacgtcccacacagaaccctgaagacgctgcta
cacacactctgcaagctcactgggccccagatcctggaccacctgtcgatgatagagaat
cgtaatgagtcggagctggaggcccatctgaggcaggtggtcaaacattctggaaacctg
tcgggactcaagagcgaccgaggcaacgagaagggcggtctgcgcacggatgaacgaatg
tcaaaggcgaaggtcagtgacattctgtctgaaatcttcaagaagatcggctccaaggaa
aatactaaagagggtttgaccgagttgtacgagtacaaacagaaatactcggacgccgac
ctggagcccttcctgaaaaacacgtcccagttcttccagagctacgtggagagaggcctt
cgcatgatcgagtccgaaagagaaggcaagtcacgcatccaaacgtcggcagtgatccct
cagcacggcgtggactccagtctgaccagcaacaacgaagaactgaaaccagctgtttac
tacgagagactgaagatcctcagacagagacaagggctggaaaacacctccaggcagggc
ggaggaggagtcgaggacgagcctcagcagcgacctcccatctcctcgctgctgtcgtct
aagccgtcggtggcgtcctccaccgacatgctgcacagcaagctgtctcagctcaaagag
tccagagagatgtaccagcaggaacacaacgcacactccaactccccgtcacacacgcac
acgcgctcggcctcgccggcggccaacctggacgacctcaagaaacggctggagcggata
aagagcaaccggcagtga
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integrated database retrieval system
