Hippoglossus hippoglossus (Atlantic halibut): 117763111
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Entry
117763111 CDS
T07778
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117763111 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117763111 (cnot2)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117763111 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117763111 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
117763111
NCBI-ProteinID:
XP_034443902
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All DBs
Position
6:complement(7261082..7268334)
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AA seq
543 aa
AA seq
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MFGARKKFVEFVEVVDNDFSDESMYYNQPSMFPHRSDKDMLSSPSPSSSGQLSQLGASLY
GPQSEFVSNTDNHHSFPMSQTWSGALGFSVRGMGNSTPQLNRNLTQGTQLPSHITPTTGV
STMSLHTPPSPSRGTLPMNTRNMLNHSQVSQSIGMSGRTNSMGSSGLGSPNRSSPSIICM
PKQQPARQPFTINSMSGFGMNRNQGFGMNNSLSSNIFNGTDGSENLTGLDLSDFPALADR
SRREGTGNPTPVLNPLAGRAPYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNND
DSKTNLNSTSKSTSNADGPKFPGDKTTSAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGM
IGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHV
PSEYLTNIHIRDKLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERV
WITRAPGMEPTLKTNNYERGTYYFFDCLNWRKVAKEFHLEYEKLEERPHVPTTFNYNPAQ
QAF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagttcgtcgaggtggtcgataacgacttctct
gatgaaagcatgtactacaatcagccgtcgatgttcccacatcgatcggacaaagatatg
ctctcctccccctcaccatcgtcgtcgggtcagctgtcgcagctcggtgcaagtctgtat
ggtccacaaagtgagtttgtttcaaatacagacaatcaccacagttttcccatgtcacaa
acctggagtggtgcactgggcttttcagtcaggggcatggggaacagcacacctcagtta
aaccgaaatctcacacaaggcacgcagctaccaagtcatatcactcccacaacaggagtc
tccaccatgtccctccacacccctccgtcaccaagcagggggacgttgccaatgaacacg
aggaacatgctgaaccactctcaggtcagtcaaagcattgggatgagcggcaggaccaac
agcatgggcagctcggggctgggcagccccaaccgcagctcacccagcatcatctgtatg
cccaaacagcagccagcacgtcagcccttcaccataaacagcatgtcaggattcggtatg
aaccgcaaccagggttttgggatgaacaactcgttatcaagcaacatcttcaatggcaca
gatgggagtgaaaatctaacaggactggatctgtcagacttccctgcgttagcagacagg
agtcgaagagaagggactggaaacccaacaccggtgctcaaccctctggctgggagggct
ccctatgttggcatggtgacaaagccatcgacagaacagacacaggatttctccatccac
aacgaggacttccctgcactgcctggcccgaactacaaggaccccacgttgaacaatgac
gacagcaaaactaacttgaactccacaagcaagagcacatccaatgcagatgggcccaag
ttccccggagacaagacgacctcagcacagaacaacaaccagaagaaaggaatccaggtg
ttgcccgatggtcgggtgacgaacattccctcaggaatggtgacagaccaattcggcatg
atcggcctgttgacgtttatccgggcggcagagactgatcctgggatggtccatctggca
ctggggagcgacctcacgacactgggactcaacttaaactcaccagaaaacctatacccc
aagttcgcctctccgtgggcctcagcaccttgtcgacctcaagacatcgacttccatgtt
ccctctgagtatttaaccaatatccacataagggacaagttggctgcgatcaaactggct
cgatatggcgaagacctgttgttctacctgtactacatgaacggtggagacctgctacag
cttttggcagcagtagagctcttcaaccgggactggaggtaccacaaagaagagcgggtt
tggataacgagggcgcccggcatggagcctacactgaagaccaacaactatgagaggggc
acctactacttttttgattgtcttaactggagaaaagtagccaaggagtttcatctggag
tacgagaagctggaagagaggcctcacgtgccaacaacgttcaactacaacccagcccag
caggccttctaa
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