Hippoglossus hippoglossus (Atlantic halibut): 117763121
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Entry
117763121 CDS
T07778
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117763121 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117763121 (usp43a)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117763121 (usp43a)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117763121 (usp43a)
Ubiquitin system [BR:
hhip04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117763121 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117763121
NCBI-ProteinID:
XP_034443921
LinkDB
All DBs
Position
1:13683616..13745420
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AA seq
902 aa
AA seq
DB search
MCVTLVFSTKGQRYLRVGLAIPLLGTLSCLRAMVAEEGKISPDQVILSELYSTGFQRSFS
DDDDLTTIADSDVVYAFQAPPLSSRGGSAPHSGYHHSLPSSPYSSSAGPDGQRLPSSGTL
SSEYLNQGGSTKLLLVICNTAGSGQQAVRFGPPFLMREDRSISWDQLQQSILSKLYYLML
NGSQAQKVGVLFKIRVVGGLTSCSYLSPQDSRPLYNPAVDRALKMCGTGGPPHVKLVIEW
EHKNKECLFGTIQEEVVKDAESVRNQQQQHLQQHSCTLDECIQLYTKEEQLAPDDAWKCP
HCKKFQQGMVKMSLWTLPDILILHLKRFRQVGERRNKLSTLVRFPLTGLDMAPHIVKRSQ
SMRNLGPWPPAWKQPSGQHPDMTLPQDYQYDLYAVCNHHGGMHGGHYTAYCRNSVDAQWY
SYDDSSVDLVPEEEVCTRGAYILFYQRRNNIPQWSASSSIRGSTSSSMSDHWLVRLTVDS
KRGSLVSRSSTTCPSSNPDSPESPVFLDDGCKDEKGGFESRPFVRGLEGRSKSMRTPSKT
KDTLSKVLPLRWSFGSKDRRKPDPVSPPDQAPAPVELVQYLESGRRPRCTKDPIVTLMSE
PRSTKEAAVAPALANVKSSNAGSMSCVDKARDEQQLESPQVPEGQRRPSDKTTSLRRSKG
SKTRDEGTLNISSSSSSNTLTRRKDSRKQSSAKASQDTETTRHFSAGVQPSYSTPSLHDG
TLRRPRGDRAEHPGAFEENSKTKRGEVPKSQEGLFSFLKGNFLKKDKDQRKSKEGESGRR
GGEEGGRRTLSRLPLSNGAAGGRSAAEREKSNGSGHLGDELVNGKVGRTTVDIKRSQSQS
NIPTKAEQSMHRTASLHRNGMSTAPAPSRSLTTDKPSYGTLQRTRYSTTSLGRKKTVPES
SF
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgacgctggtgttcagtacgaagggtcagaggtatctgcgggtggggctggcc
atacctctccttggtaccctgtcctgcctgagagccatggtggcagaggagggtaaaatc
tcgccagaccaggtcatcctgtcagagttgtactccaccggtttccagcgctccttctca
gatgacgacgacctgacgacaatcgcagacagcgacgtggtctacgccttccaggctcct
cccctctccagtcgtggaggctctgcaccgcactcagggtatcaccacagcctcccctcc
tctccctactcctcctcggctggacctgatggccagaggttaccatcgtctggaaccctc
tcctccgagtacctgaaccagggcggctccacgaagctcctcctcgtcatctgtaacaca
gcgggctccggccagcaagctgtcaggttcggacctccatttctcatgcgcgaggatagg
agcatctcctgggaccagctgcagcagagcatcctcagcaagctctattatctgatgctg
aatggatctcaggctcagaaggtgggggtgctgttcaagatccgagtggtgggaggattg
acatcctgtagctacctgtcgccacaggacagcaggccactctacaaccctgctgttgac
agagctctgaagatgtgtggcaccggggggcctcctcacgtgaagctcgtcatagagtgg
gagcacaagaataaagaatgtctgtttggcaccatccaggaggaggtggtgaaggatgca
gagagtgtgaggaaccagcagcagcaacacctgcagcagcacagctgtaccttagacgag
tgcatccagctgtacaccaaagaagagcagcttgcccctgacgacgcctggaagtgtccc
cactgtaaaaagtttcagcagggcatggtgaagatgagcctgtggactctccctgacatc
ctgatcctccacctcaagcgtttccgacaggtgggtgagcgcaggaataagctgtcgacc
ttggtgcgtttccccctgacgggactggacatggccccccacatagtgaagaggagtcag
agtatgcggaacctggggccgtggcccccagcctggaagcagccgtcaggacaacacccc
gacatgaccctcccacaggactatcagtacgacctctacgctgtgtgtaaccatcacgga
ggaatgcatggaggacattatacagcttactgtagaaattcagtggatgcccagtggtac
agctatgatgacagcagcgtcgacctggtgccagaggaggaagtatgtaccagaggagct
tacatcctcttttaccagagacgcaacaacattcctcagtggtcggccagcagctcaatc
agaggctccacaagctcatcaatgtcagaccattggctcgtccgcctcacagtggacagt
aagagaggcagtctggtgtctcgatcgtccaccacctgcccgtcttcaaatcccgactct
ccagagtcgcccgtcttcctcgacgatggttgtaaagatgaaaagggaggttttgagagc
aggccatttgtcaggggacttgaggggcgcagcaagagcatgagaacccccagcaagact
aaggacactctgagtaaagtacttccccttcgctggtcctttggttccaaggacagacga
aaacctgacccggtgtctccgccggatcaagctcctgcccctgtggagctagtgcagtac
ttggaatctggccggcgtccccgctgcacaaaggacccaatagtaacactgatgagcgaa
ccgcgcagcacaaaggaagctgctgtggcccccgctttagccaatgtcaaatcgtccaat
gctgggagtatgagttgtgtggataaagcaagagatgagcagcagctagagtctccacag
gtcccagagggccagaggaggccatcagacaagacgaccagcctgagacgcagcaagggg
agcaagacaagagatgagggcaccttgaatatcagcagtagctctagcagtaacaccctc
accagaaggaaggattccaggaagcagagctccgccaaagcttcccaggatacggagaca
acaaggcatttcagtgctggagttcagcccagctacagcacacccagccttcatgatggg
accctgagaagaccaaggggagacagggctgaacatccaggtgcatttgaagaaaactct
aagaccaaaagaggagaagtgcccaagagtcaggagggactgttctccttcttaaaaggc
aacttcttgaagaaggataaggaccagaggaagtccaaggagggtgagtcagggagaaga
ggaggtgaggaaggaggccgaaggacgctgtcaaggctgccactgtctaacggagcagcg
ggaggcaggagtgctgcagaaagagaaaagtctaatggctcaggccatctgggcgatgag
ctggtaaatggaaaagttggacgtacgacggttgacatcaaacgctcccaaagtcagtcc
aacatccccaccaaggcggagcagagcatgcacaggacagcatctttgcatcgcaatggc
atgtccacagccccggcaccgtcacgcagcctgacaacggacaaaccatcttacggcacc
ctgcagaggactcgttacagcacaacctcactggggcgcaaaaagacagtccccgagtcg
agcttctga
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integrated database retrieval system
