Hippoglossus hippoglossus (Atlantic halibut): 117763139
Help
Entry
117763139 CDS
T07778
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117763139 (ppfibp1b)
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117763139 (ppfibp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
117763139
NCBI-ProteinID:
XP_034443939
LinkDB
All DBs
Position
6:complement(10580954..10602811)
Genome browser
AA seq
997 aa
AA seq
DB search
MMADASDMLAAALEQMDGIIAGSKALDYSNGMFDCQSPTSPFMGSLRALHLLEDLRSVLE
MMDTEERENLRCQIPDSTADSLVEWLHGQLSNGHVSLGNGDHYQERLSRLESDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLEEHREKLNATEEMLQQELLCRSSLETQKHELISEVSNL
KLRLNSIDKDRVNFDDRFRDSEVFQDLILEINELRYRLTDMESEKLLFEKKLKSTKLLMA
KLSSLKIKMGQMQYEKQRKEHKLQAMKEELAILRRQLEGRDGEMRRMQDETGFKAMALSS
ADLSDRVSHPDETLRKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELKQSLLRYKKVQ
DMVMSVQGKKDKTKENEYGGDASLAFLNIPMSFEPERHEVTDVQQLKRMSPDELESLNGL
SEESSPAPSPSDPERVSESSPTDMECNQDTTKTSSQEQLDKSDKGNNEKSPSEENGKMSE
KPPLSPSATLPATTEDDSFGSRKARTSFGKGFFKIRGGKKSGSTPNLDRSRSASAPMLAE
TEGQGTDHLDLAGLPQRSANSDSTNTLPTTPEGKKKSKGIMKLFGKLKRSQSTTFTLDDN
LPEGEFKRGGVRATAGPRLGWSRDLQQVNNEVDAPFARWSKDQVCNWLQDQGLGLYVNMA
RVWISSGQTLLQASQHDLERELGIKHPLHRKKLQLALQALGSEEEDNKGKLDYNWVTRWL
DDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYEPNC
LRRRPSDENNISPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRYNVET
MALLLNIPPNKTLLRRHLATHFNLLIGSEAQQLKQECLENPDYTLLTATTKVKPKKLSFG
SFGNLRKKKQEDSEEYVCPMDVEMPKGRSFQKGYELQIYEDDLDRLEQMEDSEGTVRQIG
AFSEEIQNLTSMLKDDEFFKVVSNSPNLSVTDEDSNA
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatgccagcgacatgttggcagcggccctggagcagatggatggcattata
gcaggttccaaggctctggactactccaacggcatgttcgactgccagtcgcccacctcc
cccttcatgggcagcctgcgggcgcttcaccttctggaagacctgagaagcgtcctggag
atgatggacacagaggaaagggagaatctgcgctgccagatccccgactccacagccgac
agtctggtcgagtggctccatggtcaactgtccaatggacatgtctctctgggtaatggt
gaccactaccaggaaaggctttcccgacttgaaagtgataaggagtctctggtgcttcag
gtgagtgtgctgacagaccaggtggaagctcagggagagaagattcgggatctggactta
tgtttggaggagcacagggagaaactcaacgccactgaggagatgctgcaacaggagctt
ctgtgcagaagttctctggagacccagaagcatgagctgatctctgaagtgtccaacctg
aagctgaggctcaatagcattgacaaggacagagtgaactttgatgacagatttagggac
agtgaggtatttcaggatttgattcttgaaattaacgaactgcggtacaggttgacagac
atggagagtgaaaaactacttttcgaaaagaaacttaaatcaacaaagttgctaatggcc
aagctttctagcctgaaaatcaaaatgggccagatgcagtatgagaaacagaggaaggag
cacaaactccaggctatgaaggaggagctcgccatactgagaaggcagctggagggcaga
gacggagagatgaggagaatgcaggatgagacgggcttcaaagccatggccttgagcagt
gcagatctctcagacagagtgtctcatccagatgaaactcttagaaagaggctgaaagag
aaacatgtggaagtgcagagaatgaaaaaggcagttgaatcattgatggcagccaatgaa
gagaaggatcgtaagattgaggaactaaaacagtcgctgttacggtacaagaaagttcaa
gacatggtgatgtcagtgcaggggaaaaaagacaaaaccaaagagaacgagtatggtggt
gatgcttcacttgcgttcttaaacatccccatgtcttttgaaccagaaaggcatgaagtt
acagatgttcagcagctgaaaaggatgagtccggatgagctggaaagtctaaatggattg
agtgaagagtcttcacctgcaccgagcccctcagacccagaacgagtgtctgagtcctcg
cccacagacatggagtgtaaccaagataccacaaagacgagcagccaggaacagctggat
aagagcgataagggcaataatgaaaagagcccaagtgaggaaaacggtaagatgagtgaa
aagccacctctgagtccctcggccactttgcccgccaccacagaggacgacagctttggc
tcgagaaaagctcgtacatcttttggaaaaggtttcttcaagatccgcggtggcaaaaag
tccggcagcactcccaaccttgaccgcagccggagtgcgagtgcgcctatgctagctgaa
acagagggacagggcaccgaccatctggatctggccgggctgccacagaggtctgctaac
agtgacagtaccaacacgctccctacgaccccagaaggcaaaaaaaaatccaaaggaata
atgaaactatttggaaagttaaaaagaagtcagtctaccacattcaccctggatgacaac
ttaccagagggtgagttcaagcggggtggtgtgcgagccacagcgggacccagactgggt
tggtcacgtgatctccagcaagtcaacaatgaggttgatgctccctttgcacgctggtca
aaggatcaggtgtgtaactggctgcaggaccagggtctgggtctttacgtgaacatggct
cgtgtttggatctcctctggacagacgctgctacaggcctcacaacatgacctggagagg
gagctgggcatcaaacacccgctgcacagaaagaagctgcagctggctctgcaggccctc
ggctcagaggaggaagacaataaaggaaagctggactacaactgggtgacaaggtggctg
gatgacattggtctgcctcagtataagacccagtttgatgaggggagagtggacggccgc
atgctgcactacatgacagtggatgacctgctttctctgaaggtgggaagcgtcctgcat
cacctcagcatcaagagagctattcaagtgctccgactcaacaactacgagcccaactgc
ttgcgtcgtcgtccgtctgatgagaacaacatctctccagcagagatttcacagtggacc
aaccacagggtgatggagtggctgcgctctgtggatctcgctgaatacgctcccaacctg
agaggcagtggtgtgcacggtggcctgatggttttggagccgcggtacaacgtggagacc
atggcgctgctgctgaacatccccccgaacaagactctgctgcgtcgccacctcgccaca
catttcaacctgctcattggctccgaggcccagcagctcaaacaggagtgtctcgaaaac
ccagactacactctgcttactgccaccaccaaggtcaagccgaagaagctgtcgtttggt
agctttggcaatctgaggaagaagaagcaggaggacagtgaggagtacgtgtgtccgatg
gacgtggagatgccaaagggaagaagcttccagaagggctacgagctccaaatctacgag
gacgacctcgaccggctcgaacagatggaggactctgagggaactgtgagacagattgga
gctttctccgaggaaattcaaaacctgacgagcatgctgaaagacgatgaattcttcaaa
gtggtttcgaattcaccgaacctcagtgtaacagacgaggactccaacgcatga
DBGET
integrated database retrieval system
