Hippoglossus hippoglossus (Atlantic halibut): 117763220
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Entry
117763220 CDS
T07778
Symbol
cald1b
Name
(RefSeq) caldesmon 1b
KO
K12327
caldesmon
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117763220 (cald1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117763220 (cald1b)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117763220 (cald1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
117763220
NCBI-ProteinID:
XP_034444071
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All DBs
Position
6:17836781..17850963
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AA seq
643 aa
AA seq
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MDDDFDRRMELRRQRREQMRVDSEKVGNTNDDDEEEAREQRRRAREDRKKMRDPEESGTS
DAINSNSVEENESSSTTTDTTSAGGADDDQALLERLAKREERRQQRMKEAMERQKELDPT
ISTGDGTDDPLEEASSFSSSQQREEEEKEEEQDQVAEAGMNSWKKKDEEEVEKEEIDAAT
NEEVDQGKEEEAVPDVDNEQEERERKEEEERQQREMEEKLKKRREGHTEQGDGGEAAKGN
RRAAEKGGGRKTQKGDGGKEEEGRGRKAEERNGAEEDKGRGGKQEKEGTGRKEEDKHKKR
EMEEKKKKEEEEKLKRFGLKEKNEPAKQNGAFIENKLKKTEKTSRDNAPSMKADDVERKE
AEHKLQELKRRRNDAESEEFEKMKQKQQGSEAELEELKKKREERKKILEDEEKQRKQELE
DKKAKEQEERKRMKEEIEKRRAEAAEKKKQKEEDTSKPSFAISPKGSSKIGEKAEFLSKS
AQKNTAARVSHTPLVSKIGNRLDQYTSALQGNKEGKSPKSPLADIPTGGTRSIKSMWEKG
NVGGSSESPAPANKDLAVIRGGVAGRVNSWMAKPAEPEKSAPASAPAAAAAAAAPPAAAK
LAEVKPGDVGNKRGMWETKKSSAPAKVAVVGKGKFVTNAGVRP
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgactttgaccgccgcatggagctgagaaggcagaggagagagcagatgcgt
gttgattctgaaaaggtgggtaacaccaacgatgatgacgaggaggaagcacgggagcaa
aggagacgtgcgagggaggacaggaagaagatgagggatcctgaggagtctggtacttct
gatgctatcaacagtaacagtgttgaagagaacgaatcctcctccaccaccactgacacc
accagtgctggaggtgcagatgacgaccaggctttgctggagcgcctggccaagagggag
gagcgcaggcagcagagaatgaaggaggcgatggagagacagaaggagttagaccccacc
atcagcaccggtgacggcacagacgacccactggaagaggcgtcctcctttagcagcagt
cagcagcgtgaagaggaagagaaggaggaggagcaggaccaggtggcagaggcgggtatg
aattcctggaagaaaaaggatgaagaggaagtagaaaaggaggagattgacgctgcaaca
aatgaagaggttgatcaaggaaaagaagaggaagctgttcctgatgttgacaatgagcaa
gaagaaagggagaggaaagaagaggaggagaggcaacaaagggaaatggaggaaaagctg
aagaaaagaagagaaggacacacagaacagggagatggaggagaagcggcaaaaggaaat
agaagagcggctgaaaaaggaggaggaagaaaaacacaaaaaggagatggaggaaaagaa
gaagaaggaagaggaagaaaagcggaggaaagaaatggagcagaagaagataaagggaga
ggaggaaaacaagaaaaagaaggaactggaagaaaagaagaggataaacacaaaaagaga
gagatggaggaaaaaaagaagaaagaggaggaggaaaagctaaaaagatttggtcttaag
gaaaagaatgaaccagccaaacagaacggagccttcattgagaacaagctcaagaaaaca
gagaagacatcaagggacaatgctccctccatgaaggcagacgacgtggaacgaaaggag
gctgaacataagctgcaggagctgaagcgccggcgaaacgacgcagagagcgaggagttt
gagaagatgaagcagaagcagcagggctcagaggccgagctggaggagctgaagaagaag
agagaggagaggaagaagatcctggaggacgaggagaagcagaggaaacaggagctggag
gacaagaaggccaaagaacaggaggaaaggaagaggatgaaggaggagatagagaagagg
agggcggaggctgcagagaagaagaaacagaaagaggaggacacctcaaaaccttccttt
gctatcagtccaaaaggctcctccaagattggagagaaggcagaattcttgagcaaatca
gcccagaaaaacactgcagcaagagtgtcacacactccacttgtgtccaagataggcaac
agactggaccagtacacttctgcactccagggtaacaaagaaggcaaatcccccaagtct
cctctggcagatattcctacaggaggcacacgcagcatcaagagcatgtgggagaaaggc
aacgtcggtggctcctctgaaagtccagcccctgccaacaaggacttggctgttatcaga
ggaggtgtggctggacgtgtcaacagctggatggcaaagcctgcagagccagagaagtcg
gcacctgcatctgcacctgcagcagcagcagcagcagctgcaccacccgcagcagcaaag
ctggcagaagtgaaaccaggtgacgttggtaacaagcgcggcatgtgggaaaccaagaaa
agctctgcacctgccaaggtggcagttgtaggaaagggcaagtttgtcacaaatgcaggt
gtaagaccctaa
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