Hippoglossus hippoglossus (Atlantic halibut): 117763224
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Entry
117763224 CDS
T07778
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117763224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117763224
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117763224
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
HECT type E3
117763224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WD40_RLD
RCC1
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
117763224
NCBI-ProteinID:
XP_034444076
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All DBs
Position
6:2934168..2943219
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AA seq
1007 aa
AA seq
DB search
MFSWGEDCHQVFWSKHSPVDRAAEARVHQFNPGYLIRDLSAGHSVLSFIKTNGNAFIIRT
NETKDGRRVRGKQKFVECREKIRAVSCTDDVVSLLSDTGSVLCVDTTRPPFTPRPMKELC
NIPVCQVACGSQHSVALTNDGRVYTWGQDSRGQLGLGQGKPFANSPQQLRSLSSTPLVHV
AAGGEQSFALSVSGGVFGWGRNDRGQLGLGDTTDRRTPAPVKGLNMKGTIHISCGKDHTA
TLTKDGAVFTFGSGQFGQLGHNSFTDQLRPRLVAELLGAKVTEIACGLHHTLVSTDAKKV
YSFGCGEQGQLGHGGESHPSVPLPVQLPQGSSDGPNIRNIFAGGNCSFATCSSNEEAHEE
PNTDGVSNASQYRLDDMIDKWTSKCDSKTWKMIKQEIHRTFSTASRMNQSFLEKRKEEHF
QTSSKYHGVNLSLARVAFKKLVKKDDALAEVAAAVLKLLPSFTDPVGVEGLRIFLLLNDL
LHVIQKLHRPQSTELAQAVAAAVLKLSAENLQVIGNWWTTLSASKISAYVRVWKKALSDM
LSSSPDPPRSGFRNLLQVLQYMYNANSRTAESQRLPDSDFYLLMDQNFLCEDLRQWILQT
KRKMVGAEPLILGRFPIVMDLQSKKMILDVYAGTTKWLSVSRIGWNFFWKYGPDCPFAQD
PLFRLKLRRASISEDTFEQLDAVHHKDYKKRLEVFFDENSEQDNVNIKDFFHEVFHELVS
DESGMFTFNDSKTLAWFPSNATHDHHRYFLFGVLCGLALYNQCLIHLPFSMALFKKLLGV
KPSLEDIMEFSPDVGKSLLSILEEYGDEDLESLGQEFSICWDGTEVDLDPTNPEKTVTSQ
NKKEFVDAYVNHAFNTSVESVFLEFKQGFYTVFDRDLLKVLRPKELQEVLQGKDFCDWET
LKQNTVYGRPYHVDHPNMQMFWEVFDELTEDQKKKLLWFVTGFERLPIRGNKSMTIRLRP
VCDISEDQIYPEALTCYSFLDLPLYSTREIMKTKLTEALSNSRRSYK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctggggagaggactgtcaccaggtcttctggtccaaacactcacctgtggac
agggcagcagaggccagggttcatcagtttaacccgggttatctcatccgggacctgtct
gcaggacacagtgtgctcagcttcatcaagaccaacggaaatgcttttatcatccggaca
aacgagaccaaggatggaagaagagtcagaggaaaacagaagttcgtggagtgcagagag
aagatccgggctgtgagctgcactgatgatgtggtgtcactgctgtcggacacaggctca
gttctctgtgtggacacaacgcgcccccccttcacaccaaggccgatgaaggagttgtgt
aacataccagtttgtcaggtggcgtgtgggagtcaacattcagtcgccttgaccaacgat
ggccgggtgtacacgtggggtcaggattccaggggccagctgggtctggggcaggggaag
cccttcgccaactcaccccaacagctccgctctctgtcgtcgaccccgctggttcacgtc
gccgcggggggggagcagagcttcgccctctctgtcagtggaggtgtgttcggctggggc
agaaacgaccgtgggcagctcgggctgggagacacaacagacagacgtacaccagctcct
gttaaaggtctgaacatgaagggaactattcacatttcctgtgggaaggatcacactgct
actttaactaaggatggtgctgtgtttacgttcggctcggggcagttcgggcagctcggg
cacaactcattcactgatcagctccgtcctcgtctggttgccgagctgttgggggcaaag
gtcaccgagatcgcatgtggactacaccacacattagtgtcgacagacgccaagaaggtt
tactcctttgggtgtggagagcaagggcagctgggacacggaggcgagagtcatccgtct
gtgccgctccccgttcaactgccacaaggcagcagtgacgggcccaatattagaaacatc
ttcgcaggaggaaactgttcgtttgcgacatgctcgtctaatgaggaagctcatgaggag
ccaaacactgacggggtcagtaatgcgtcacagtatcgtcttgatgacatgatcgacaaa
tggacgtctaaatgtgattcaaaaacctggaaaatgatcaaacaggaaatccacaggact
ttttccacagcatctcgtatgaatcaaagtttccttgagaaaagaaaagaagaacatttc
cagacctcctcaaagtaccacggcgtgaacttgtcgcttgcacgagtcgctttcaagaaa
ctggtgaagaaggatgatgctttggcagaggtggcggctgctgtcctgaagctgcttccc
tctttcacggatccagtgggagtggaggggttgaggatcttcttgcttctcaatgatctt
cttcacgtgatccagaagctccatcgaccacagagcaccgagctcgctcaggccgtcgct
gctgccgttctgaagctgtctgctgagaaccttcaggtcataggaaactggtggacgaca
ctgtcagcctccaaaatatctgcatatgttagggtttggaagaaagccctctcagacatg
ctgtcctcaagccctgatcctccccgctccggattcagaaatctgttacaagtcctccag
tacatgtacaatgccaacagcaggactgcagagtctcaaaggctgccagacagcgacttt
tatttgctcatggaccaaaactttctttgtgaggatctgcgtcaatggattttacagacg
aaacgcaagatggtgggtgctgagcctcttatcctcggtagatttccaattgtgatggat
ctgcaatcaaagaaaatgattcttgacgtgtatgctggaaccaccaagtggctatcagtc
agtcggatcgggtggaatttcttctggaaatatggaccagattgtccgtttgctcaagac
ccgctttttagactgaagctgagacgagcatccatttcagaagacacttttgaacaactg
gatgctgttcatcacaaggactataaaaaaagacttgaggtcttttttgatgagaactct
gagcaagacaatgtcaacatcaaagacttttttcatgaagtctttcacgagctggtgtcc
gacgaatcggggatgttcactttcaatgactccaaaacacttgcatggttcccttccaac
gcaacacacgaccaccacaggtacttcctgttcggagttctgtgtggcttggccttgtac
aaccagtgcctcatacacctaccgttctcgatggctctgttcaagaagctgctcggtgtg
aagccttcgctggaggacataatggaattcagtccggacgttggaaagagtctgctgtcc
atccttgaagaatatggggacgaagacttggaaagcctgggccaggaattttcaatctgc
tgggatgggacagaagttgaccttgatcccacaaaccctgaaaaaactgtgacaagtcaa
aacaagaaggagtttgtggacgcctacgtgaatcacgccttcaacacgtctgtggagagt
gtgtttctggagttcaagcaaggcttctacacggttttcgaccgggacttgttgaaggtg
ttgcggccaaaggagctgcaggaagtcctgcagggcaaagacttctgtgactgggaaacg
ctgaaacagaacacagtttacggaaggccgtaccatgttgaccaccccaacatgcagatg
ttttgggaggtttttgatgaactaaccgaggatcagaagaagaagttactttggtttgtg
accggttttgaaaggttgcctattcgtggcaataaaagcatgacgatcaggctcagacca
gtctgcgacatctctgaggaccagatctaccctgaagcactcacgtgttactcttttctg
gatctgcccctatactcaaccagggagattatgaaaaccaagctgacagaggccctgagc
aacagtagaagaagctacaagtga
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