Hippoglossus hippoglossus (Atlantic halibut): 117763225
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Entry
117763225 CDS
T07778
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117763225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117763225
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117763225
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
HECT type E3
117763225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
117763225
NCBI-ProteinID:
XP_034444078
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All DBs
Position
6:2957807..2966703
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AA seq
1006 aa
AA seq
DB search
MFSWGEDCHQVFRSKHSPVDRAAEARVHQFNPGYLIRDLSAGHSVLSFIKTNGNAFIIRT
NETKDGRRVRGKQKFVECREKIRAVSCTDDVVSLLSDTGSVLCVDTTRPPFTPRPMKELC
NIPVCQVACGSQHSVALTNDGRVYTWGQDSRGQLGLGQGKPFANSPQQLRSLSSTPLVHV
AAGGEQSFALSVSGGVFGWGRNDRGQLGLGDTADRRTPAPVKGLNMKGTIHISCGKDHTA
TLTKDGAVFTFGSGQFGQLGHNSFTDQLRPRLVAELLGAKVTEIACGLHHTLVSTDAKKV
YSFGCGEQGQLGHGGKSHPSVPLPVQLPQGSSDGPNIRNIFAGGNCSFATCSSNEEAHEE
PNTDGVSNASQYRLDDMIDKWTSKCDSKTWKMIKQEIHRTFSTASRMNQSFLEKRKEEHF
QTSSKYHGVNLSLARVAFKKLVKKDDALAEVAAAVLKLLPSFTDPVGVEGLRIFLLLNDL
LHVIQKLHRPQSTELAEAVAAAVLKLSAENLQVIGNWWTTLSASKISAYVRVWKKALSDM
LSSSPDPPRSGFRNLLQVLQYMYNANSRTAEPQRLPDSDFYLLLNPFFLGADLRQWILQT
KHEMGAEPLILGRFPIVMDLQSKKMILDAYAEITKEGSFSQIGWNFFCNYGPDYLLAEDA
LLRLKLRRASISEDTFEQLDAVPHKDYKKILVVFFDGNFERSIVNIKDFFHEVFHELVSD
ESGMFTFNDSKTLAWFPSNATHDHHRYFLFGVLCGLALYNQGLIHLPFSMALFKKLLGVK
PSLEDLMEFSPDVGKSLLSILEEYGDEDLESLGQEFSICWDGTEVDLDPTNPEKNVTSQN
KKEFVDAYVNHAFNTSVESVFLEFKQGFYTVFDRNLLKVLRPKELQEVLQGKDFCDWETL
KQNTVYGRPYHVDHPNMQMFWEVFDELTEDQKKKLLWFVTGFERLPIRGNKSITIRLRPV
CDISEDQIYPEALTCYSFLDLPLYSTKEIMKTKLTEALSNSRRSYK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctggggagaggactgtcaccaggtcttcaggtccaaacactcacctgtggac
agggcagcagaggccagggttcatcagtttaacccgggttatctcatccgggacctgtct
gcaggacacagtgtgctcagcttcatcaagaccaacggaaatgcttttatcatccggaca
aacgagaccaaggatggaagaagagtcagaggaaaacagaagttcgtggagtgcagagag
aagatccgggctgtgagctgcactgatgatgtggtgtcactgctgtcggacacaggctca
gttctctgtgtggacacaacgcgcccccccttcacaccaaggccgatgaaggagttgtgt
aacataccagtttgtcaggtggcgtgtgggagtcaacattcagtcgccttgaccaacgat
ggccgggtgtacacgtggggtcaggattccaggggccagctgggtctggggcaggggaag
cccttcgccaactcaccccaacagctccgctctctgtcgtcgaccccgctggttcacgtc
gccgcggggggggagcagagcttcgccctctctgtcagtggaggtgtgttcggctggggc
agaaacgaccgtgggcagctcgggctgggagacacagcagacagacgtacaccagctcct
gttaaaggtctgaacatgaagggaactattcacatttcctgtgggaaggatcacactgct
actttaactaaggatggtgctgtgtttacgttcggctcggggcagttcgggcagctcggg
cacaactcattcactgatcagctccgtcctcgtctggttgccgagctgttgggggcaaag
gtcaccgagatcgcatgtggactacaccacacattagtgtcgacagacgccaagaaggtt
tactcctttgggtgtggagagcaagggcagctggggcacggaggcaagagtcatccgtct
gtgccgctccccgttcaactgccacaaggcagcagtgacgggcccaatattagaaacatc
ttcgcaggaggaaactgttcgtttgcgacatgctcgtctaatgaggaagctcatgaggag
ccaaacactgacggggtcagtaatgcgtcacagtatcgtcttgatgacatgatcgacaaa
tggacgtctaaatgtgattcaaaaacctggaaaatgatcaaacaggaaatccacaggact
ttttccacagcatctcgtatgaatcaaagtttccttgagaaaagaaaagaagaacatttc
cagacctcctcaaagtaccacggcgtgaacttgtcgcttgcacgagtcgctttcaagaaa
ctggtgaagaaggatgatgctttggcagaggtggcggctgctgtcctgaagctgcttccc
tctttcacggatccagtgggagtggaggggttgaggatcttcttgcttctcaatgatctt
cttcacgtgatccagaagctccatcgaccacagagcaccgagctcgctgaggccgtcgct
gctgccgttctgaagctgtctgctgagaaccttcaggtcataggaaactggtggacgaca
ctgtcagcctccaaaatatctgcatatgttagggtttggaagaaagccctctcagacatg
ctgtcctcaagccctgatcctccccgctccggattcagaaatctgttacaagtcctccag
tacatgtacaatgccaacagcaggactgcagaacctcaaaggctgccagacagcgacttt
tatttgctcctgaacccattctttcttggtgcagatctgcgtcaatggattttacagacg
aaacacgagatgggtgctgagcctcttatcctcggtagatttccaattgtgatggatctg
caatcaaagaaaatgattcttgacgcgtatgctgaaatcaccaaggagggatcattcagt
cagatcgggtggaatttcttctgcaattatggaccagattatctgcttgctgaagatgcg
cttttaagactgaagctgagacgagcatccatttcagaagacacttttgaacaactggat
gccgttcctcacaaggactacaaaaaaatacttgtggtcttttttgatggtaactttgag
cgaagcattgtcaacatcaaagacttttttcatgaagtctttcatgagctggtgtccgac
gaatcggggatgttcactttcaatgactccaaaacacttgcatggttcccttccaacgca
acacacgaccaccacaggtacttcctgtttggagttctgtgtggattggctttgtacaac
cagggcctcatacacctaccgttctcgatggctctgttcaagaagctgctcggtgtgaag
ccttcgctggaggacttaatggaattcagtccggacgttggaaagagtctgctgtccatc
ctggaagaatatggggacgaagacttggaaagcctgggccaggaattttcaatctgctgg
gatgggacagaagttgaccttgatcccacaaaccctgaaaaaaacgtgacaagtcaaaac
aagaaggagtttgtggacgcctacgtgaatcacgccttcaacacgtctgtggagagtgtg
tttctggagttcaagcaaggcttctacacggttttcgaccggaacttgttgaaggtgttg
cggccaaaggagctgcaggaagtcctgcagggcaaagacttctgtgactgggaaacgctg
aaacagaacacagtttacggaaggccgtaccatgttgaccaccccaacatgcagatgttt
tgggaggtttttgatgaactaaccgaggatcagaagaagaagttactttggtttgtgacc
ggttttgaaaggttgcctattcgtggcaataaaagcatcacgatcaggctcagaccagtc
tgcgacatctctgaggaccagatctaccctgaagcactcacgtgttactcttttctggat
ctgcccctatactcaaccaaggagattatgaaaaccaagctgacagaggccctgagcaac
agtagaagaagctacaagtga
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