Hippoglossus hippoglossus (Atlantic halibut): 117763358
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Entry
117763358 CDS
T07778
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117763358
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Others
Others
117763358
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Toxin_18
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
117763358
NCBI-ProteinID:
XP_034444299
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Position
1:2327260..2477843
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AA seq
1335 aa
AA seq
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MLSSSPMRAGLHLIKSFNLDHLGSAALFYNTAFGHRHNLRSSSSSTAQQQLTHSGEAESG
VWGGKKDFLPAPHLSVPPAMETGSTFCPKWHSALWLLLLMMLSFFHAAKAEITCRSCQPG
NKWRARELLLNFDTSGSSAGLKREVLGRGDGAAGRARAAGGGSRRLRCAAGSADCAPDEA
EYTGPRLGRTTRSLRANGDIGESEFAKTKVSDVKMSGQRRSSDWAGLPSAVSPKRRTRRN
SGKDEARSPRAARRQDPGEGTGSAAARRVTRSELRRSGEERRAAGPRQEELKLNSSTFAL
TGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAK
TILSYLYVSPNNKRKIMLLTDPDVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWI
LAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVT
CKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTAGRPIYYVSAKRDVFTPMKLPKY
TLPKDLHVISTDENRVVAAVQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGHEGNVMV
NLYEVAGIKGMFLANRKTDNQVKTHITYNRGRDWRLLQAPSKDLRGNNIHCVLPYCSLHL
HLQVSANPYTSGNIASRESAPGIIVASGSFGSELTPSNVSVYITSDAGNTWRQIFDEEYA
VLYLDQGGALVAIRHTPLPIRHLWLSFDEGRQWNKYSFTNTPLFVDGVLGEPGEETLIMT
IFGHVSHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGPQGEPCLMGVKRIYRKLKPT
SRCVMGKMYSVSMTSGLCECTEADFECDYGYERRSNGNCSPAFWFHPSSMSRSCTTGMTF
LNSTGYRKVVSNNCTAGVSVEYTARRRQCPVLAPKGLHLVTSEGTLTATLGINVTFLVFL
EEGDGARTSINLDFGDGHALTYSNVSSIEDGIKHIYRAVGIYRVIATGENSLGSEAAMLY
LHVTCQLEYIHLSAPFVAVRNKEVNLTAVLWPSQVGTVTYIWWIGNNTEQPVITLEGSVA
CMFSREGINTVTVQVSAGNTILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVS
RVIKNSLIQATAVREDKLLVAVLPGVPTAAEFFLLPDKQLTEGKPEKTAAHLDQLSEVLL
SALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSSSAMLMLLSVVVVGLAVFVVYK
FKRKIPGLNVYAQMQNEKEQEMMSPANPTEATPGSQRDLVHSLEILDTELNSRPIGCMKP
HVHVKFSTELPTYIV
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctcctcccccatgcgcgcggggcttcatttgatcaaatccttcaacttggac
cacttaggctcagctgcacttttttacaacactgcatttgggcaccgccacaacttacgc
agcagttcctcttccacagcgcagcaacaattaacacacagcggagaggcagagagcgga
gtgtgggggggaaaaaaggacttcttgcctgcaccgcatctttctgtgccgccagccatg
gagacgggctccacattttgcccaaagtggcacagtgcgctttggcttttgcttttgatg
atgctcagctttttccacgcagccaaagctgagataacttgcaggtcgtgtcagcctgga
aataagtggcgcgcacgggaattactgttgaatttcgacacgagtgggtcctcggcgggg
ttgaagagagaagttttgggacgcggggacggggcggcggggagagcccgggctgcgggt
ggagggagtcggcggctccgttgcgcggcggggtccgctgactgcgctccggatgaggcg
gagtacacggggccacggctgggacggactacacgcagcctgcgcgcaaacggtgacatt
ggcgagagcgagtttgcgaagactaaagtttcagatgtgaaaatgagcggccagcggagg
tccagcgactgggccggtctcccctcggccgtctcacccaaaaggcgcaccaggaggaac
agtggtaaagatgaagccaggtccccccgcgcggcccgacgccaggacccgggagagggc
accggttcggcggcggcacgcagagtgacgcgctctgaattgcgcaggagcggagaggag
cggagagccgctggtccgaggcaggaggagctcaaacttaacagttcgacgttcgccctg
accggggactcatctcacaaccaggctatggtgcactggtccggccagaacagcagtgtg
attctgatgctgaccaaactatttgacttcaacctcaacagtgtgactgagagttcatta
tggaggtcaaccgactatggagcaacgtaccagaagctgaatgacaaagtcggagcaaag
acaatactcagttacctttatgtgagcccgaacaacaagagaaagatcatgctgctaact
gatccggatgtggagagcagtctcctgatcagctccgatgaaggagcaacctaccagaag
taccgactcaacttttacatcctcagcctgctcttccatcctgagcaggaggactggatt
cttgcctacagccacgaccaaaagctctacagctcagtggagttcgggaggaggtggcaa
ctggtgcatgagagagtggctccgaatcgcttctactggtcgaaaatgggtctggacaaa
gagccgggcctaattcacctggaaaccagcatctctgaaggacaggcactgtatgtcacc
tgcaagctgcagaactgcacagatgccaacaagggcaaaccattcccaggctacattgac
cccaattctctggtggtgcaagatgagtatgtctttgtccaggtatctactgcggggagg
ccaatctactacgtgtctgctaaaagagacgtctttaccccgatgaagctgcccaagtac
accctacccaaggacctgcatgtgatcagtacggatgagaaccgtgtggtggcagccgtg
caggagtggaaccaaaacgaaacctacaacctgtatgtgtccgacacgtcaggggtctac
tacacgctggctctggagaatgtggtcagcagcatgggccacgagggcaacgtcatggtc
aatctatatgaggtagcgggaataaaagggatgttcctggccaacaggaagacggataac
caagtaaagacgcacatcacctacaacagaggcagagactggaggctgctgcaggcgccg
agcaaagacctgaggggcaacaacattcactgtgtgctaccgtactgttcgctacatctc
catctccaagtttctgcaaatccctacacatctggaaacatagccagcagggagtcagcg
ccggggatcattgtcgcatcaggctcatttggctcggagctgacccccagcaacgtcagt
gtgtacatcacctcagatgcaggaaacacgtggagacagatctttgatgaggagtatgca
gtgctctatcttgaccaaggaggcgccttggttgcaataagacacactccacttcccatc
cgacacctatggttgagctttgacgaaggacggcagtggaacaagtacagcttcactaac
acgcctctgtttgtggacggggtgctgggagagcccggggaagagactctcatcatgacg
atattcggccacgtcagtcatcgctctgagtggcagctggtgaaaatcgacttcaggtcc
atcttcaacaggagatgtacagaggcggattatcagacgtggcacctgcacaaccagggc
ccgcagggtgagccgtgcctcatgggagtgaaaagaatctaccggaaactgaagcccacg
tccaggtgtgttatgggaaagatgtactcggtgtcaatgacgtcgggactctgcgaatgc
acagaggctgactttgagtgtgattatggctacgagagacggtccaatggaaattgcagc
ccagccttttggttccatccatcatcgatgtccaggagttgcacaacggggatgactttc
cttaacagcactggctacaggaaagtggtgtctaataactgcacagctggagtcagtgtg
gagtacacagccaggaggcggcagtgtcccgtcctagcacccaaaggcctccacctggtc
accagtgagggcacactgacagccacgttgggcatcaatgtcaccttcctcgtttttctg
gaggagggtgacggagcgaggacgagcatcaacctggacttcggagacggccacgctctg
acgtactccaacgtgagctccatcgaggatggcatcaaacacatctacagggctgtggga
atctaccgggtgatcgccaccggggagaacagtctgggttcagaggccgccatgctgtac
ctacatgtaacatgtcagctggagtatatccatctctcagctccctttgtggcagtgagg
aataaggaagtgaacctgactgctgttctctggcccagccaagtgggaacggtcacctac
atctggtggattggaaataacacagagcagccagtaatcaccctagagggaagtgtagca
tgcatgttctccagggaaggcatcaacacagtcaccgtgcaggtgtctgcagggaatact
attctgcaggacagaaaaaccatcgctgtccacgaatatttccgatctcatctgctcgcc
ttttcatcaaaccttgacgaccacaaccctgatgtcgcagaatggaggctggacgtgagc
cgagtcatcaagaactctctgatccaggccacagccgtgagagaggacaagctcctggtc
gccgtcctcccaggtgtaccaaccgcagcagagtttttcctcctgcctgacaaacagtta
actgaggggaagccagagaagactgctgctcatttagatcagctctcggaggttttgctg
agcgccttgaaccagaaccttgtccagttcacgctgcggccgggggtccaagtcactgtg
tacgcagcgcacctatcagcagcgcccctagtggacaccagcgagaaccacagcagctcc
gccatgctaatgctgctctccgtggtggttgtgggtttagccgtgtttgtcgtctacaaa
ttcaagaggaagatcccaggcctcaacgtctatgcgcagatgcagaatgaaaaagaacaa
gaaatgatgagtccagccaatccaacagaggccacgcccggctcacagcgggacttggtg
cattctttggagattctggacacagagttgaactcacggcccatcggatgtatgaaacct
catgtacatgtgaaattctccacagagctccccacatacatcgtctga
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