Hippoglossus hippoglossus (Atlantic halibut): 117763438
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Entry
117763438 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: neural-cadherin-like
KO
K27892
neural-cadherin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117763438
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Cadherin related
117763438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
Cadherin_pro
EGF
hEGF
EGF_Teneurin
EGF_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
117763438
NCBI-ProteinID:
XP_034444450
LinkDB
All DBs
Position
6:complement(6889671..6978826)
Genome browser
AA seq
2915 aa
AA seq
DB search
MIWGLLLWCLFMAAAGYQARERLPFFHGHVFENSPVASKVNGLSIPVRRVDAQKWCPVSG
MHFKLYGNGSDDFRAFAHHRRGNLLLKTSRVLDREARSEYRLSVGVCCQTCASDSVVSEV
ASVKVDVLDTNDHAPTFRSADTVHITLDDTTALRSVVHRLEAVDADSGKNAELTYISVPQ
NGSFYVVPKTGEVLLVDSILGLPSQVRFTVFARDHGWPPLTSKGVVVTIAPQRWATRNAE
LARRAQRAGRSPRALLDPGSLVHLNVSEDASIGSVITSLSPTRFQSAAYELIYPESQSSP
VSVGRDSGDITISRRLDREAEPTVELTVKIQDKRGPDWYLNKVKLKIIDVNDNVPEWNMK
PYPYLAVVSPEASAGTLVYQLQAQDGDEGHSGEVEYFLSDGGDGCFAVDKNTGQVVTTGL
VLQRDREYLLSVVALDGLGSRSAPAMLSVMAGARAPQFTNISYAISIPENTPEGQPFLVV
LAISFQKQPIGYSLLINPSSLFSIRQETGEISLTRTLDYESDQRRYLLMVRASEEPGSLS
TATEVQVLITDENDCVPEFLQSIYSVDGVPETVTTATSLLQVLATDCDSGLNAELTYYTL
SPDFSISPHGTVFPAGRLDYERPNHLYEFVVMAVDNGDEPHSGTATVRVRMANVNDEAPE
FSQTVYRTFVSEDAGPNTLVATVLAKDPDGDGIIYSITAGNEEGNFIIDSQKGLIRLRST
PLPKLQGLEYVLNATATDDNASGGPHSLSSTARVIVGVDDVNNNKPVFEECQQYREQASV
LENQPTGTFVLQVHAVDADEGANGKVKYGLMHRDSTMPAFRIHPDSGAIATARRFDKRAA
AKSNSITVTATDWAEEPLIGICQLTVQILDQNDNNPKFENLRYEYFLREDTLVGTSFLRV
AAHDDDFGTNAAITYSMSPEQPEYLQVNPVTGWVYVNQPISQRTYITRDIVATDGGDRNT
SVELAVTITNVKNQPPQWEEESYSVVIPENTARDTPIVTVKATSQLGDPRVTYNLEDGMV
PETNMPVRFYLSPNREDGSASILVSEPLDYESTAFFSLRVRAQNVAAVPLAAFTTVYINI
TDVNDNVPFFTSSIYEASVTEGAQIGTSVLQVSAHDKDLGLNGEITYSLLSDSSGDHHLF
RIDPKLGVIYTEAVFDREARSSYLLEVQSEDGQESARPGKNKQSNSDTHAYVRVFISDVN
DNKPIFAQRLYEVGVDENADVGLTVVAVSANDEDEGANAKVRYQITSGNKVGVFDIEPEV
GTIFIAQPLDYEQQKRYKLLVLASDGKWEDYAAVVVTVVNKNDEAPVFSMNEYYGSVTEE
LDGSPVFVLQVTATDPDKDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTMDREERAV
WRFVVMATDEEGEGLTGFTDVIINVWDINDNAPTFSCAPDNCHSSVAENSPPWAFVVEMT
AVDIDDAAVGQNAILTYRIIENVHNEKNVDLFTIDSSTGTISVAAEGLDREITENHLLVV
EARDGGGMTGTATATVIITDINDHVPKFKEDWCGARVPESTKEDAPILELSAVDPDAGTY
GQLTFSVVAGDPEQSFYMVSHRLDQTGTLRLKQKLDFEKPGKQRFNLTIKVEDSDFSSLI
HCLVQVEDENDNVPVFDPSSHLLPPLPEDTSVGTSVIQVVATDSDSGLNRDILYSIHPDS
DPYGHFTVSRAGVVTVARPLDREKLAGYELVITATDQGSPALTGSVTVHLPLLDTNDNGP
ELETEYAPVLWENSLPPQVVWLNESSTLLHVVDRDSPEHGPPFYLSIPPLFSTDFHLQDH
GNSSATLTALRRFDRERKSEIHLPLIMIDSGDPPMTGTNTLTITIGDQNDNAHQAGEKDV
YAYSRKGRMTNAALGKVYAPDPDDWDNKTYTLETSAAKYFSLNQSTGELTMRQNTPAGSY
WLQVGVSDGVWPDVTSGVRVHVRELGEKAILSSASLRLTGITARDFIGSRVEGKSRLEMF
WDFLSQSLSVRSGSINIFSMADREDRTVDIHFYVLTDTGYLRPEKLHAVLAAHKKKLQSM
LRLSVSQVQVDECVRTDCKKSGGCSSQLSISDSPTLVDSGAFSLVSVKLTSSAVCGCAAR
EMTHQPCSSYPSNPCLNGGTCVDTQNGYRCHCPPQLEGPDCQQTRLSFLGDGYAWFPPIR
PCFDSHLSLEFMTEEDDGLLLYAGPVATLLPGDSEDYMAIELIGGTPSLKINHGSGTLVL
QLTNNVGVADRRWHRLDVKSNSKEVRFTLDRCSTAIVMETEGVDSWAMTEDRSSCEIRGV
TPNRDKYLNGSHVLQLGGVSGNISYEYPQLQHKHYTGCVRNLLVDSKLYDLGSPAESSNT
VPGCSLIDDQCTNMEQPPSCGKRGRCHGAWGSFSCLCEPGFTGPLCDQVAPEFSFDGRSH
IQFQLSWSLPARQTRVQVGVRTRAGAGVILSLLSQEQNEYLRLEVIQGLLAVFYNLGDGD
YNITLPFHRLNDGEWHDVVLDRYGREFTLQLDGGGGRREVTVSPGRSQEIIIDPSAVMIG
NSFPSGHNRSFLGCLRDVRFNGRSVSLDREQPLEGLQVVTSQGVSVGCSSDACRRHHCSA
PLVCVDLWRHHECRCPPGHLTKESSLGKACVYTLCASRPCRHGTCVAHSPSRYSCHCSEG
YRGRHCEVTLAMFHNEDGNSLSLSSMFAISICVMAFLVLMLGLFLYSCWRRHKGLKEGVY
HVSAHHGEWEDIRENVLNYDEEGGGEQDQNAFNMVELQRSIQPSPAQSLRYSYPHSIISY
PQTKLPQDNNKKEVSNGSAAIALRLAIPPSETQTLPSPLTFRRSHKTLSFSSQDLARYLC
EVIRDMEHPGELGTMTTPRRPSGKERGMAAVRSLSSLSASQGSEVKLQGGQGGRLDRFKT
LRAVVCDLRGDSKAPEGQRDKVKESRGQLNCEKSG
NT seq
8748 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggggctcttgttatggtgccttttcatggcggctgctggatatcaagcacgg
gagcgactgcctttctttcacgggcatgtttttgagaactcgccggtggcttctaaagtg
aacggactgagcattccggtgaggcgcgttgacgcgcaaaaatggtgcccagtctccgga
atgcacttcaaactgtacgggaatggcagcgacgatttccgcgccttcgcccaccacagg
cgggggaacctattactgaaaacttcccgggtcttggacagagaggctcggtcagagtac
cggctgagcgtcggcgtctgctgtcagacctgcgcgtcggactcggtcgtctccgaggta
gcgtcggtcaaagtggatgttttggacaccaacgaccacgcaccgacttttcgcagtgca
gacaccgtccacataactttagacgacaccactgcgctccggagtgtggtgcaccggctg
gaggcggtggacgcagacagcggcaagaacgcagagttgacttatatttctgtgccccaa
aacggcagtttctacgttgtcccgaagacaggcgaagttttgctggtggactccatcctg
gggctcccctcacaagtcagattcacagtttttgccagagaccacggctggccccctctg
accagtaaaggtgtggtggtaaccatcgcaccacagcggtgggcgacgcgcaacgctgaa
ttggcgcgccgggcacagagggcagggcgttcgccgagggcattgcttgaccccggctct
ctggttcacctcaacgtgtctgaggacgccagcatcggctccgtcatcacgagcctgagc
cccaccaggtttcagtccgccgcctacgagttgatttacccggagtcgcagagctccccg
gtcagcgtggggcgcgacagtggagatatcacgataagcaggaggctggatagggaggca
gagcccaccgtggagctcactgttaagattcaggataaacgaggcccagattggtacctg
aacaaggtgaagctgaagatcattgatgtcaatgacaacgtccctgagtggaatatgaag
ccgtacccttacttggctgtagtttcccccgaggcctcagctggaacgctcgtctaccag
ctccaggcccaggacggggatgagggccacagtggagaggtggaatacttcctgtcggat
ggtggtgacggctgctttgcggtggacaagaacacaggccaggtggtgaccacggggctg
gtgcttcagagggacagagagtacttgttaagcgtggtggcccttgacggcctgggcagc
cgcagtgcccccgccatgctctccgtgatggcaggagcccgagcgccgcaatttaccaat
attagctacgccatctccataccggagaacacacctgaaggacagcccttcctggtggta
ctcgccatttccttccagaagcagccaatcggctacagcctgctgatcaatcccagcagt
cttttcagcatccggcaggagacgggggagatcagtctgacccggacgctggattatgag
agcgaccagcgacgctacctgctgatggtgcgagccagcgaggagcccggcagcctcagc
acggccacagaggttcaggtgttgataacggacgagaatgattgtgtcccggagttcctc
caatccatctacagcgtggatggagtccctgagactgtaaccacggcaacgtccctgctg
caggtgttggccacggactgtgactcggggttgaacgctgagctcacctactacaccttg
agcccggacttcagcatctcgccccatgggaccgttttccccgcgggccggctggactac
gagaggcccaaccatctgtatgagtttgtggtgatggccgtggacaacggagatgagccc
cattccggcaccgccacggtccgtgtgaggatggcaaacgtcaacgatgaggcccctgaa
ttctcccagactgtatatcgaacctttgtttccgaggacgcgggccccaacaccctcgtc
gccacagtcctggccaaagacccagatggcgatggtataatctactccataacagcaggc
aatgaggaaggaaacttcatcattgacagccagaaagggctgattcgcctgcgctccact
ccacttcctaagcttcaggggctggagtatgtcctgaacgcaacggccacagacgacaac
gcatcgggcggaccgcactccctctcgtccactgctcgggtcatcgttggggtcgatgat
gtcaacaacaataaacctgtatttgaggagtgccagcaatatcgtgagcaggcttcagtg
ctggagaaccagccaacggggacttttgtgttgcaagtgcatgctgtggatgcagatgag
ggagcaaatggaaaagtcaaatatggcttaatgcacagagacagcaccatgcctgccttc
cgaattcatccggactcaggagcgattgcgacggccagacgcttcgacaagagagcggca
gcgaagagtaattccattacagtaacggccactgattgggcggaggagccgctcatcggc
atctgtcagctcaccgtccagatactggaccagaatgataataaccccaagtttgagaac
ttgcgctacgagtactttctgagagaagacactctggtcggcaccagcttccttcgagtg
gccgctcacgatgacgactttggcacgaacgcagccatcacttactccatgtccccggag
cagcccgagtacctgcaggtcaaccccgtgaccggatgggtctacgttaaccagcccata
tcacagaggacttacatcactcgggacatcgtagcaaccgacggcggagaccgaaacact
tctgtggagctggccgtcaccatcaccaatgtcaagaaccagcctccgcagtgggaggag
gagagctacagcgtcgtcatacccgagaacaccgccagagacacgcccatagtgactgtc
aaggcgacctctcagctgggcgacccgagggtgacctacaacctggaggacgggatggtc
ccggaaaccaacatgcccgtgcgattctacctctcccccaaccgcgaagatggctcagcg
tcaattctggtgtctgagccgctggattacgagtccacggcctttttctctctgcgggtg
cgagcgcagaatgtggctgcggtgcctctggcagctttcaccacagtttacatcaacatt
acagatgttaatgacaacgtgccattcttcacctcctccatctacgaggcgtcggtgacg
gaaggagcccagatcgggacttcggttctccaagtgtctgcacacgacaaagacctgggt
cttaatggagagatcacttactctcttctgagtgacagcagtggagaccaccatctgttc
cgcattgacccgaaactcggggtcatctacacagaagccgtgtttgatcgcgaggcccgc
agctcctatttgttggaagttcagtcagaagacgggcaggagtcagcgcgacctggcaaa
aacaaacagtcaaactcagacacacacgcatatgtgagggttttcatcagcgacgtcaac
gacaacaaaccgatctttgctcagcgactgtatgaagtcggcgtcgacgagaatgcagat
gtgggcctgactgttgtcgccgttagtgctaatgacgaagatgagggggccaacgccaag
gtgcgctaccagataacgtccggcaacaaagtgggcgtttttgacatagagccggaggtg
gggacgatctttattgcccaaccactcgactatgagcagcagaagagatacaagctactg
gtcctagcgtccgatgggaagtgggaagactatgccgccgtggtggtcactgtggtgaat
aagaatgatgaggcaccagtgttctccatgaatgagtactatggatcggtcacagaggag
cttgacgggtcaccagtgtttgtactacaggtgacagccactgacccagacaaagatgcc
gaccagggagccatacggtattccattcacggccaaggggcagagtcgcacttcatgatc
aacgacatcacgggggagatgtatgcccagcgcaccatggaccgagaagagcgtgccgtc
tggcgctttgttgtcatggcaacagacgaagagggcgagggacttaccggctttacggat
gtgattataaatgtgtgggacatcaatgacaatgcccccactttctcctgtgctccggat
aattgccacagtagcgtggcggagaactcccccccttgggcgtttgttgtggaaatgacg
gcggtagacattgacgatgcggccgtgggtcagaacgcgatcctcacctacaggattatt
gagaatgtgcacaatgagaaaaatgtcgatctcttcactattgattccagcactggcacc
atatctgttgcagcagagggtctggaccgggagattactgaaaaccaccttctggttgtc
gaggcccgggacggcggcggcatgacgggtacagctactgccactgtaatcataacagac
atcaatgaccacgtcccaaagtttaaagaggactggtgcggcgctcgtgtgccagagagc
actaaagaggacgctccgattctggagttgagcgccgtggaccctgatgctggcacgtat
gggcagctgaccttcagtgtggtggctggagacccagagcaaagtttctacatggtcagc
cacagactggaccagacagggactctgagactgaagcagaagctggactttgagaagcca
gggaagcagcggttcaacctcaccattaaagtggaggactctgacttctccagcctcatc
cactgtctggtacaagtggaggatgagaatgataacgtccctgtgtttgacccgagttcc
caccttctccctcctttgcccgaggacacaagtgtaggaaccagtgtcattcaggtcgtg
gccactgactcggactcaggtctgaacagggacattttgtacagcattcaccccgactct
gacccatatggacattttaccgtcagtcgagcaggggtggtcacagtcgccagaccattg
gatagggagaagctggcaggttatgaacttgtaatcacggcgacagaccagggttccccg
gcactgactggcagtgtcacagtccacctgccgctgctagacacgaatgacaacgggccg
gagctggagacggagtacgctccagtgctgtgggagaacagtctgccacctcaagtggtc
tggctcaatgagagctcaactctgctccatgttgtggacagggactcgccagagcacggg
cctccgttctacctctccatacccccgcttttctctaccgacttccacctgcaggatcac
gggaacagctcggccacactcaccgccctgcgtcgattcgacagggagaggaagagcgag
atccacctgccgttgattatgatagacagcggcgatccgccaatgacgggcacgaacacg
ctcacaatcaccatcggtgaccagaatgacaacgcccatcaggctggggagaaagatgtc
tatgcgtacagccgcaagggaaggatgacaaatgcagcactggggaaggtgtatgcccca
gatcctgatgactgggacaacaagacctacactctggagacaagtgcagccaaatacttc
agcctgaaccagagcacgggcgagctgaccatgcgacagaacactccagcgggcagctac
tggctgcaggtcggggtgtccgatggggtgtggccggacgtgacgtcaggtgtcagagtt
catgtcagggagctgggggaaaaggccatcctgtcgtccgcctcgctgcgtttgacaggc
attacggctcgagatttcatcgggtctcgagtcgagggcaagagtcggctcgagatgttc
tgggacttcctgtctcaaagcctgtccgtcagatcggggagcatcaacattttcagcatg
gccgacagagaggacagaacggtggacattcatttctacgtgctaactgatactggctac
ctgcgcccggagaagctgcacgctgtcctcgctgcacataaaaagaagctgcagtccatg
ctgcgtctgagcgtgagccaggtgcaggtggacgagtgtgtgcgcacagactgcaagaaa
tccggtggctgctcctcacagctcagcatcagtgactcgcccaccctggtggactcgggt
gctttttccctcgtctcggtgaagctgacgtcctcggctgtgtgtggctgcgctgccagg
gagatgacccaccagccgtgctcctcctaccccagtaacccctgcctcaatggggggacc
tgcgtcgacacccagaacggatacaggtgtcactgccccccacagcttgaggggccagac
tgtcagcagaccagactcagtttccttggtgacggctatgcctggtttccccccataagg
ccatgttttgatagccatctttcactggagtttatgacggaagaggatgacgggctgctg
ctgtatgccgggccggtcgccactctcctgcctggggactcggaggactatatggccata
gagctgattggtgggacacccagtctgaaaattaaccacggctctgggaccctggtgctc
cagttaacgaataacgtcggcgtggctgacaggcgctggcatcgccttgacgtgaagagc
aacagcaaagaagtgcgcttcactctcgatcgatgttccactgccattgtcatggagact
gaaggcgtggactcatgggcgatgacagaggaccgctcgtcctgtgaaatccgaggggtc
acacccaacagggacaagtacctgaatgggagccatgtattgcaactcggaggggtcagc
gggaacatatcgtatgaatacccgcagctgcagcacaaacactataccggctgtgtgagg
aacctgctcgtggacagcaagctgtacgaccttggttccccagctgaatcctccaacact
gtgccgggctgctctcttattgatgaccaatgcaccaacatggagcagcctccctcctgt
ggcaagaggggtcgctgtcacggcgcgtggggctccttcagctgcctctgtgagccgggg
ttcacggggccactgtgcgatcaagtggctccagagttttcctttgacggccgcagccac
atccagttccagctctcgtggtccctgcccgcacgacagaccagagtccaggtcggggtt
cggacgcgtgccggcgccggcgtcatcctcagtctactctcccaggagcagaatgaatac
cttcgcttagaggttattcagggtctcctggccgttttctacaacctcggtgatggcgac
tacaacatcacgctgcccttccatcgcctcaacgacggagagtggcacgacgtggtgctg
gatcggtacggcagagagttcaccctgcaactggatggaggcggaggacggcgagaggtt
acagtctcacccgggcggagtcaggaaatcattatcgacccctcggcagtgatgattgga
aactcttttccctcaggacacaaccggagcttccttggctgtttgcgagatgtaagattc
aacggccgctccgtctccctggacagagagcagcctttagaagggcttcaggtggtcacc
tcgcagggcgtctctgtcggctgctcttcagacgcctgcaggagacatcactgctcggct
cccctggtctgcgtggacctttggaggcaccacgagtgcaggtgccctccaggccacctg
accaaagagagctccttgggcaaagcgtgcgtctacaccctgtgcgccagccggccttgt
cgccacggcacctgtgtggctcactccccgtcccgctactcgtgccactgcagcgagggc
taccgggggcgccactgcgaggtgacgctcgccatgttccacaacgaggacggcaacagc
ctcagcctcagctccatgttcgccatcagcatctgtgtcatggccttcctagtgttgatg
ctgggcctgtttctctactcctgctggaggaggcacaagggcctgaaggagggcgtgtac
catgtgtcggcgcaccacggcgagtgggaggacatccgggagaacgtgctcaactacgac
gaggaaggaggaggcgagcaggaccagaacgccttcaacatggtggagctgcagcgctcc
atccagcccagcccggcccagtccctgcgttacagctacccacacagcatcatctcctac
ccgcagaccaagcttccccaggacaacaacaagaaggaggtgtccaacggcagcgcggcc
atcgccctgcgcctcgccatccccccctcagagacccaaaccctgccatcccctctgacc
ttccgccgctcccacaaaaccctctccttctccagccaggacttggcccgctacctgtgc
gaggtcatcagggacatggagcacccgggggagctgggcaccatgaccacgccgcgccgt
ccctcagggaaggagcgcggcatggcggcggtgcgctccctcagctccctcagcgcatct
caggggtcagaggtcaagctccaggggggccagggcggccggctggacaggttcaaaacc
ctccgggctgtggtgtgcgatttgagaggagactccaaggctcccgagggccagagagac
aaagtgaaggagagcagagggcagctgaactgtgagaagagcggctga
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