Hippoglossus hippoglossus (Atlantic halibut): 117763447
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Entry
117763447 CDS
T07778
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117763447 (dennd4a)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117763447 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
117763447
NCBI-ProteinID:
XP_034444461
LinkDB
All DBs
Position
6:complement(14676880..14701034)
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AA seq
1736 aa
AA seq
DB search
MEDKGPRVADYFVVAGLTDSCKPLEEELHFDDAGPKSVKPKAPITDVAVVIRSLGEEVPP
GFTCVESTPSGLSAELNGASLRGPQIFLCFKRGRDKPPLTDLGVLYEWKEKLKSGCHLVQ
TTPSGRPANISNSSSQRIYITYRRAPKSQPHTSLAVTDVCIIVPGKGEIPPHTFCKVDKN
LNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGATIE
CWPAHTKHSLPVFSTFVLTGASGGKVYGAAIQFYEPFSEENLSERQRSQLSLPSSDLGPD
GTRSVYSNKSICLLSHWPFFQSFKSFLTFLYRYSISGPHALPIEKHISHFMQNVPFPSIQ
RPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVHS
LRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGLDSRYFDLYVPPA
DISCVDLDTNTISQKEDKKALTWKILPRRACKYLLNTLNKLYQQLIEGGQVSRDDVQTEH
TVTDSELNGGKSLHTLELEIQEAFLRFMAAILRGYRSYLLPITQAPSETTTDASSLFDLQ
GFLKSRDRSHQRFYSLMIKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTSGGKMDTE
RPEDTRLIELDESHRSEHTVYINPPELPPLPQGEEYPLCYSYSGFPVLNAELLEPLEGQN
PQSAHVASRHSSPASPTAIFRRSKQEIKSAQRMAKTYSSMPQMWSKCLLRHCYGLWFICL
PGFVGTCHSKVRALRTAYDMLRKMQEKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFEM
KKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVVLGVLQFKQAGRKQQTPHR
DPQLSDGSDLDTVSHGSLDSTNDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSKE
EERMCGRESDSTPLGEDKGPRQSTPEIEVPNSSSISTSTKSYKSPDANAGKGSRLVSSPS
GDTILCGAVPKTERPKSLDLCGGLETLRFSVPHLGSAKQQHLAADRLHGVEEEELETDKH
KPLVERSVSSSGVVERSDVSMERSVSFSAGTVRRTGIETGFDPLSLMATETVQECDQDDC
STPTTRRNLAKEIETYMSNCNSPPSSRTPSMDHQKPSSPSIRSNSSPHTSPRPSTLLRSN
THLPLPVKSKLRPSPSLPLGVCNIDRERPSSLVSPSSPTASTSSFSMDSLFTPTLDIFKS
SVISAGKGVAEKASRLYSRLSSQTSLTQDSNCDRISVSSLTSAEADCSSLLDHDSCLDPD
AFTSPQHGSMSRLRRSPVVGHATLSSPSTPNRVFRHNSFSGGLALPSKTPHTPDSSPDTS
RFQPTPNYTIEVQMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLPFLNV
EIKDLRPQSRSSKESNPVIEEDTSASLNPEAKMSVTDCAAQSSAAPPQRQESSGSAGTAA
PASAPVSVPYLSPLVLWKELESLLVNEGDQAISSLSVVDQHPIVFWNLVWYFRRLELPSI
LPALILASQHCRQGDQTPQSVSSDDSKQVLVRIMWDNLKLHQDRVQPCYVLWNTHCANSL
VRSGLCEEGQLFTVELLQGFVRSIKKSDVYQPMSQILQLLGPELGFKRQRSLYRDLLFLA
LVALGKNNINIDAFDREYKLAYDRLTPDLVKLTHNCDRPPGPGVMECRRTFREPSL
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggaggataaaggtcctcgtgtagccgactactttgtggttgccggcctcaccgactcg
tgcaagcctctggaggaggagctccactttgacgatgccggtcccaaatctgttaaaccc
aaagcccccatcacagacgtagcggtggtgatccgctccctgggcgaagaggtacccccg
ggtttcacctgtgtggaaagcaccccctcaggcctttctgcggagctcaatggagccagc
ctcaggggcccgcagatcttcttgtgcttcaagcgaggcagagataagcctccactgaca
gatcttggtgttctgtacgagtggaaagagaaactgaagtctggatgtcacctggtccag
accacgccctcaggtcgtcctgccaacatcagcaactcgtcctcccaacgcatctacatc
acctaccgccgggctccgaagagccagccgcacacttcactcgctgtcactgatgtctgc
atcatcgtccccggcaagggggagataccccctcacaccttctgcaaggtggacaagaac
ctcaacagcagcatgtggggatcctcagtctacctttgttataagaaatctctggctaaa
gcaaacacaattgcatacaaagcaggtctgctgtgtaggtaccctgaggaggactacgag
tccttcccactgccggagtcagtgcctatgttctgcctccccatgggggcgacgatcgag
tgctggccggcacacaccaagcactccctgcctgttttctccacatttgtgctgacgggg
gcctctggaggaaaggtgtacggagcagccatccagttctatgagcctttctcagaggag
aacctgtctgagcgtcagcgctcacagctcagcctgccgagctctgacctcggacccgac
gggaccagaagtgtttacagcaacaagagcatctgtctgctctcccattggcccttcttc
cagtccttcaagagctttctcactttcctctaccgatactccatctctggaccccacgct
ctgcctattgaaaaacacatctcgcacttcatgcaaaatgtgccattcccctccattcag
agaccacgcatcctcgtgcagctgtctccacatgacagcctgatactgagccaacctgtc
tcctctccactgcctctcagtggtggaagcctctccacattgctgctgaatctgggcccg
aaaaatgccgccaccctgctggtgctggctgtcaccgagcacaagatcctggttcattcc
ctgcgtccggctgtactcaccagtgttactgaggccctcgtgtctatgatctttcccttc
cactggccgtgcccctacatccctctgtgcccgctggccctggccgacgtgctcagcgcg
ccctgtcctttcatcgtgggcctggactccagatattttgacctttacgtgcccccagct
gacatcagctgtgtggatctggacaccaacacaatctcccaaaaagaagacaagaaggct
ttaacatggaaaatcttgcccaggagagcttgtaaatatcttctgaacactctgaataag
ctctatcagcagctcattgagggtggtcaggtgagccgtgatgatgtgcagacggagcac
acagtgactgacagcgagctaaacggggggaagagcctccacactctggagctggaaatc
caggaggccttcctgcgcttcatggcggccatcctacgaggctaccgctcctacctgctg
cccatcacccaagccccctctgagacgaccacagacgctagctccctctttgacctgcaa
ggtttcctgaagagcagagaccgctcccaccagaggttctactccctcatgatcaagact
caaatgttcagccgtttcatagaggagtgctcctttgtcagtgataaagacgccagcctg
gctttctttgacgagtgcgttgataagctcttcaccagtggaggcaagatggacactgag
cggccagaggacacccggctgatcgaactggatgaatcccaccgcagcgagcacacggtc
tatatcaaccccccagagctgcctccgctgccacagggagaggagtatcccctgtgctat
agctactccgggttccctgtactgaacgctgagctcctggagccactggagggacaaaat
cctcaatcggcacacgtggcctctcgccacagcagcccagccagccccacggccatcttc
agacgctccaaacaggagatcaaatcggctcagaggatggccaagacctactcatccatg
cctcagatgtggtccaagtgtctgctgcgtcattgctacggcctgtggttcatctgcctg
ccgggatttgtcgggacctgtcactctaaagtgcgcgctctgcgcacggcttacgacatg
ttgaggaagatgcaggagaagaagctgcaggctcccgatgaggtgtgttaccgtgtgttg
ctgcagttgtgtggtcagtacagtcagcctgtcctggccgtcagggtgctgtttgagatg
aaaaaggcaggagtccaacccaatgccatcacctatggatactacaacaaggcggtgtta
gagagcacgtggccctccaccaccagaggaggctactttctgtggggaaagctcaggaac
gtggtactcggcgtgctccagttcaagcaggcagggagaaaacagcagactccgcacaga
gatcctcagctttcagacggcagtgatctcgacaccgtcagtcacgggagtttggacagt
actaatgactctgccgagcgcacgtccatcgacaccgacttcaccaaaatggactccagt
gatgatggattcagtacaggtggacagtcagaccaaggttacgattccctttcgaaagag
gaagagaggatgtgcggcagagagagcgacagcacgccgctgggagaagacaaagggccg
aggcagtccacacctgagattgaggttccaaacagcagcagcatatcaacttctactaaa
agttataaatcaccagacgccaatgcaggtaaaggcagcaggctggtttcgagtccgtct
ggtgacaccattctgtgtggagctgtgccaaagacagagaggcctaaatctctcgacttg
tgtggcggactggaaaccctgaggttcagcgtgcctcatctgggctcagcaaagcagcaa
cacctcgctgctgacaggctgcacggagtagaggaggaggagctggagactgacaaacac
aaacctctggtggagaggagtgtgagctccagcggagtcgtggagaggtcagacgtctcc
atggagaggagcgtcagcttcagtgccgggactgtgaggaggacaggtatagagacaggg
tttgaccccctgtcactgatggcgacagagactgtacaagagtgtgaccaggacgactgc
agcacgccaaccactcgccgcaacctggctaaggagatcgagacgtacatgagcaactgc
aacagccccccgagcagccgcacacccagcatggaccatcagaaaccctccagcccctcg
attcgatccaactcatctcctcacacctcaccgagaccctccactctactgcgctccaac
acgcacctcccgctgcccgtcaaatccaagctgagaccgtcaccgtctcttcctctgggt
gtctgtaacatagacagagagaggccttcctcattagtgtcaccctcatcacccactgcc
tccacctcgtcgttctccatggactctctctttacgccaactctggacatcttcaaaagc
agcgtcatatcggcagggaagggcgtggctgagaaggccagccgcctttactctcgtctg
tcttcccagacttcattgacacaggattcaaactgtgaccgcatcagtgtctcgtcgctg
acgtcagcagaggcagactgctcctcgctgctcgatcatgactcctgcctggacccggat
gcttttacctccccccagcacggcagcatgtcccgactcaggaggagccctgttgtgggc
cacgctaccctgagcagccccagcacgcccaacagagtgttcagacacaactccttctct
ggtggtttggcacttccctctaaaactcctcacactccagattcctcccccgacaccagc
cgcttccagcccactcccaattacaccatagaggtgcagatgtccagttgttcgctctgt
aagacctgtgactgtctggtgtacgatgaggagatcatggctggctggacggcaaacgac
tcgaacctcaacagcacttgtcccttctgcggcacggccttcctgcctttcctcaacgtg
gaaataaaagatctgagaccacagagcaggtcctctaaggaaagtaatcctgttatagag
gaggacacgtctgcatcactcaatcccgaggccaaaatgtccgtgactgactgtgcggct
cagtcatctgcagctcccccgcagagacaggagagcagtgggagtgctgggacggcagcg
ccagcctccgctccggtgtcagtgccctacctcagccctctggttctgtggaaggagctg
gagagcctgctggtgaatgagggcgaccaggccatctcctccctgagtgttgttgaccaa
caccccattgtcttctggaaccttgtgtggtacttccgaaggctcgagctgccaagtatc
ctgccggctcttatcctggcctcccagcactgtcgccagggtgaccagactcctcagagc
gtctcatcagacgacagtaagcaggtgcttgtgaggattatgtgggacaacctgaagttg
caccaagacagagttcaaccctgttacgtcctgtggaacacacactgtgccaactccctg
gttcggtcggggctgtgtgaggagggccagctcttcactgtggagctactgcagggtttt
gtgaggagcattaagaagagtgatgtctatcagcccatgagtcagatcctccagctgctg
gggccggagctgggtttcaagagacagaggagcctctacagagatttactgttccttgct
ctagtggctttgggaaagaacaacattaatatagatgcttttgaccgggagtacaagttg
gcatatgatcgcctcacgccagacttggttaaactgacgcacaactgcgaccggccccct
ggaccaggggtcatggagtgcaggagaacatttagggagcccagcctgtag
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