Hippoglossus hippoglossus (Atlantic halibut): 117763484
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Entry
117763484 CDS
T07778
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04517
IgSF CAM signaling
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117763484
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117763484
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117763484
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117763484
Intermediate filaments
Intermediate filament-binding proteins
117763484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
PMC2NT
FERM_C1_MyoVII
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
117763484
NCBI-ProteinID:
XP_034444531
LinkDB
All DBs
Position
1:complement(29972945..30001672)
Genome browser
AA seq
2351 aa
AA seq
DB search
MMTTVAAEYDHMELQQQYSSSNDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVD
KALQFLKEQRVHLENMGCHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKD
ALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNA
FNLAEQHLGLTRLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNA
IETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQ
EKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDISAYEER
VQAVVAVAKELEAEHYHDIKRITARKDNVIRLWEYLLELLKARRLRLEMNLGLQRVFQEM
LYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVTTNANKHSGN
DSGYKPCDPQVIQDRVSHLEFSYQELIQLAAERRARLEESRRLWKFYWEMAEEEGWIREK
EQILSSLEHGKDLTGALRLLSQQRALEDEMTGRAGHLHHTIAEGQAMVEAGHFGATRIQE
RIADLQAQWTALEQLAAARKKRLEEALALHQFQTDADDVDAWTLDALRIVSSGETGHDEF
STQALVRKHKDAAAEVVSYRPVIDLLHEQATSLPKEEAESEEVRGRLAGIEERYKEVAEL
TKLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSLEIPEKLEDLEVIQHRFESLEPE
MNNQASRVAVVNQIARQLMHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGV
QNYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRG
EAQRLAEEHPDQAKAITGRLAEINAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSW
LSRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQY
MFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEM
PSTLEGAEAAIRKQEDFMTTMDANEDKINGVVEAGRRLASDGNIDAERIQERVASIDERH
KKNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQ
AFMAELQSNKEWLDKIQKEGMMLVSEKPETEAVVKEKLSALHAMWEELESTTQTKAQCLF
DANKAELFTQSCTDLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQKEVV
ELQSQVKALGQEVKDADEVDGRRQLVESKFQELLEPLRRRRNFLVESREVHQFNRDVEDE
ILWVQERMPVATSTDHGHNLQTVQLLIKKNQTLQKETQGHQPRIDDILERSQSLLRDESS
NTDLIRQRLAELQQLWRQHMEEAECRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSE
EKAKDELSAVTMLKKHQIVELAVEDYAETVHQLSKTSRGLVSDAHPESERISMRQSQVDK
LYAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQE
RFREFARDTGNIGQERVDAVNRLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRT
QILAASFELHKFYNDAKEILGRILDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGT
QVRQLQDDAVRLQSAYAGDKADDIQRRECEVLVAWRSLLEACDGRRLRLLDTGDKFRFFS
MVRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALL
ARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEP
YLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRR
KPPSPEPPLIQHDESQQHSGVIVQNGLASDHDSPRDGEDGADLVNGVAERSSKEPSPTPS
PTSGRKSKTSLSSTLPSKTQESPPSQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNQE
IGFYKDTKAVAQGVPYHNEVPISLKEAACDVASDYKKKKHVFKLRVNDGNEFLFQAKDEE
EMSTWIQAILNTSAADRSDVQGSLPGTPASGRAHTLPAAVTLTTESSPGKREKDKEKEKE
KRFSLFSKKKQ
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggccgccgagtacgaccacatggagctgcagcagcagtacagcagc
agcaacgacacggtcaacaaccgctgggacgacgactgggacaatgagaacagctcggcc
cgcctgttcgagcgctcccgcatcaaggcgctcgcagatgagcgggaggcggtgcagaag
aagaccttcactaaatgggtcaactctcacttgtccagagtctcgtgcagaatcactgat
ctttacatggatctgagagacggacgaatgctcatcaaactgctggaggttctgtcagga
gagagactgccgaagccgaccaaaggtcggatgcgtatccactgtctggagaatgtggac
aaagctctgcagttcctgaaggagcagcgggttcacctggagaacatgggatgtcacgac
attgtggacggaaaccaccgactgacgctcggcctcatctggacaatcatcctccgcttc
cagatccaggacatcagtgtggagactgaagacaacaaagagaagagatcagctaaagac
gctctgctgctgtggtgtcagatgaagacggcagggtatcccaacgtgaacattcacaac
ttcagcaccagctggagagacggaatggcgttcaacgctctgatccacaaacacaggcct
gatctgatcgactttgacaaactgaaaaaatccaacgctcactacaacctgcagaacgct
ttcaacctggcagagcaacacctgggcctcaccaggctgctggaccccgaggacatcagc
gtggaccatcctgatgagaagtcagtcatcacctacgtggtgacgtattatcactatttc
tctaagatgaaggctctgaaggtggagggcaaacgcatcggaaaggttctggacaacgcc
atcgaaacggagaagatgatcgagaagtacgagtctctggcgtcagacctgctggagtgg
atcgaacagaccatcatcatcctcaacaacaggaagttcgccaactctctggtcggagtc
cagcagcagctccaggccttcaacacctaccgcaccgtggagaaacctccaaagttcaca
gagaagggaaacctggaggttcttctcttcaccatccagagtaagatgagagccaacaac
cagaaggtctacatgccccgagagggaaaactcatctctgacatcaacaaggcctgggag
cgactggaaaaggccgagcacgagagggagctggctctgaggacggagctcattcgtcag
gagaaactggaacaactggccagacgcttcgaccgcaaagcggccatgagagagacctgg
ctcagtgagaaccagaggctggtgtcacaggacaactttggattcgaccttcaggctgtc
gaggcggccaccaagaagcatgaggcaattgagacagacatttcagcatacgaggagcgt
gtccaggctgtggttgccgtagcgaaggagctggaggcggagcactaccacgacatcaaa
cgcatcactgccaggaaggacaatgtgatccggctgtgggagtatctgctggagctgctg
aaggcccgcagactccggctggagatgaacctgggtctgcagagagtcttccaggagatg
ctgtacatcatggactggatggatgaaatgaagatgctactgctgtcccaggattatggg
aagcatctgttgggtgtggaggacttgctgcaaaaacatgccctggtggaggccgacatc
ggcatccaggctgaccgggtgaaggcggtcaccacaaacgctaacaagcactccggcaac
gacagtggctacaaaccctgcgaccctcaggtcatccaggaccgagtttcccaccttgag
tttagctaccaggagctgatccagctggctgccgagcgtcgcgcccgcctggaggagtcc
cgtcgcctctggaagttctactgggaaatggctgaggaggagggctggatccgtgagaag
gagcagatcctttcttctctcgaacatggcaaggacctgacaggggcgctgcgcctcctc
agccagcagcgtgctctggaggatgagatgaccggccgcgctggacacctccaccacacc
attgctgagggccaagccatggtagaggccggtcactttggtgccactaggattcaggag
cgtattgctgacctgcaggctcagtggacggcactggagcagctggcagcagcgaggaag
aagaggctggaggaggctctggccctgcaccagtttcagactgacgcagatgatgttgat
gcctggacgttagatgccttgcgcattgtctccagtggagagacgggccatgatgagttc
tccacccaggcgctggtcaggaaacataaggatgcagcagcagaggtagttagctaccgg
ccagtcatcgacctacttcacgagcaggctacctccctgcccaaagaggaggcggagtca
gaggaggtgcgtggtcgtctggccggcattgaggagcgctataaggaggtggctgagctg
acaaagctgaggaaacaggcgctgcaggatgctctggcgctctataagatgttcagtgaa
gccgacgcatgtgaggtgtggatcgatgagaaggagcagtggctgaacagcttggagatc
cctgaaaaactggaagaccttgaggttatacagcacaggtttgagagtctagagccagag
atgaacaaccaggcgtctcgtgtcgctgtggtgaaccagatcgcccggcagctgatgcat
aatggtcacccaagtgaaaaggacatcaagacccagcaggacaaactgaacaacaggtgg
agtcagttccgtgacctggtggaccagaagaaggagtccctgaactctgctctgggtgtg
cagaactaccacctcgactgcaacgagaccaagtcctggatcaaagagaagaccaaggtc
atcgagtccacgcaggagctgggcaacgatctcactggtgtcatggccctgcagcgtaaa
ctgaccggtatggagcgtgacttggctgccatcgaggacaaattgggtgacctgcgcggt
gaggcccagcggctggcagaggagcaccccgaccaggctaaggccatcacaggccgtctg
gctgagatcaatgctgtctgggaggaaatgaagaacacactgaagaaccgtgaggagtct
ttgggtgaggcccggaagctgcaacagttcttgcgtgagctggacgatttccagtcgtgg
ctctcccgcactcagaccgccatcgcctcagaggacatgcccaacacgctggctgaggca
gagaagctgatggctcagcatgaaggcatcaagaacgagatccagaactatgaggaggac
taccagaagatgcgggacatgggggagatggtgactcagggccagacagacgctcagtac
atgttcctgcgacagaggctgcaggcgctcgacaccggctggaacgaacttcacaaaatg
tgggagaaccggcagaacctgctgtcccagtcacatgcttaccagctgttcctcagggac
acgaagcaggccgaggccttcctcaacaaccaggagtacgtcctggctcacactgagatg
ccctctactctggaaggtgccgaggccgccatcaggaagcaggaggacttcatgaccacc
atggacgccaacgaagacaagatcaacggtgtggtggaggccggcaggcgcctggcgagc
gacgggaacattgacgccgaacgtatccaggagagagtcgcctccattgacgaaaggcat
aagaagaacagggaggctgctgtggagctgctgatgagactgaaggacaacagagacctg
cagaagttcctgcaggactgtcaggagctgtctctgtggatcaacgagaagatgctcaca
gcgcaggacatgacgtacgacgaggccaggaacctacacagcaagtggctgaagcaccag
gccttcatggccgaactgcagtccaataaagagtggctggacaagatccagaaggaaggc
atgatgctggtgtcagagaaaccggagacggaggcggtggtgaaggagaagctgtcagcg
ctccacgccatgtgggaggagttagagtcgaccacgcagacaaaggctcagtgcctgttc
gatgccaacaaggccgagctgttcactcaaagctgcaccgacctcgacaagtggctcgtt
ggtctcgagggtcagatccagtctgacgactacggcaaagatctgacctctgtcaacatc
ctgctcaagaaacagcagatgctggagaaccaggtggaggtgcgtcagaaggaggtggtg
gagctgcagagccaggtgaaggctctgggtcaggaggtgaaggacgctgatgaggtggac
gggcggaggcagctggtggagagtaagttccaggagctgctggagccgctgagacgccgc
aggaacttcttggtggaatcaagagaagttcaccagttcaaccgagatgttgaggatgag
attctgtgggttcaggagcggatgcctgtcgccacgtccaccgaccacggacacaacctg
cagaccgtccagctgctcatcaagaagaaccagactctgcagaaggagacccaaggacat
cagcctcgaatcgatgacatcctggaacgcagtcagagcctgctgcgcgacgagtcctcc
aacaccgacctcatccgtcagcgtctggccgagctgcagcagctgtggcggcagcatatg
gaggaggcggagtgccgacacggccggctggaggaggcccacaaggctcagcagtactat
tttgacgctgccgaggccgaggcgtggatgagcgagcaggagctgtacatgatgtcagag
gagaaggctaaggacgagctgagcgccgtcaccatgttgaagaagcatcagattgtggag
ctggcggtggaggactacgccgagaccgtccaccaactgtcaaagaccagccgaggactg
gtgtccgacgcacacccagagagtgagcggatcagcatgcgtcagtctcaggtggacaaa
ctttacgccggcctgaaggacctgtctgaagagaggcgtggcaaattggacgagaggctc
cgcctcttccagttgaaccgtgaggtcgacgacctcgagcagtggatcgctgagcgggag
gtggtggccgggtcacatgagctgggacaggactacgaacacgtaactatgttacaggaa
cgtttccgggaatttgcccgggacacggggaacatcggtcaggagcgcgtggatgctgtt
aaccgtctggcggacgagctgatcaatgccgggcatggcgacgctgcgactgtggcggag
tggaaagacgggcttaacgaggcctgggccgacctgctggagctcatcgataccaggacg
cagatcctcgctgcctccttcgagctccacaagttctacaacgatgcgaaggagatcctt
gggcgcatcctggacaagcagaagaagctgccggaggaggttggacgagaccagaacacg
gtggagacgctgcagaggatgcacaccaccttcgaacatgacatccaggcgctgggaaca
caggtgaggcagctgcaggacgatgcagtccgccttcagtcggcatatgcgggcgacaaa
gctgacgacatccagcggagggagtgcgaggtgctggtggcctggaggagtctgctggag
gcgtgcgacggacgccggctccgcctcctcgacaccggcgataagttcaggttcttcagc
atggtccgagacctgatgctgtggatggacgacgtgatccgactcatcgaggcccaggag
aaacctagagacgtgtcgtcagtggagctgctgatgaacaaccatcagggcatcaaagcc
gagattgatgcccgaaacgacagcttcaccgcctgcatagagctggggaaagccctgctc
gcccgaaaacactacgcctctgaggagatcaaagagaagctgctgcagctgacggacaag
aggaaagagatgattgacaagtgggaagatcgatgggagtggctacggcttatcctggag
gtgcaccagttctcccgggatgctggcgtcgccgaggcgtggctgctgggtcaggagccc
tacctgtccagcagggagatgggacagagtgtggacgaggtggagaaactcatcaaacgc
cacgaagccttcgagaagtcggccgccacctgggaggaacgtttctcggctctagagcga
ctgaccacgttggagctgttggaggtgcggcggcagcaggaggaggaggagcgcaggagg
aagccgccgtctccagagccgccgctgatccaacacgacgagtcacagcagcacagcggc
gtcatcgttcagaacggactggcgtccgaccacgactctcctcgggacggcgaggacggt
gccgatctggtgaacggcgtggccgagcggagctccaaggagccgagtccgaccccgtcc
ccgacctccggcaggaagagcaagacgagcctgtcgtccacgctgccgtccaaaacccag
gagtctcccccgtctcagctggaggggctcctgcaccgcaaacacgagtgggaggggcac
aacaagaaggcgtccaacaggtcgtggcacaacgtgtactgtgtcatcaacaaccaggaa
ataggtttctacaaggacaccaaggcggtggctcagggcgtcccgtatcacaacgaggtt
cccatcagcctgaaggaggcggcatgcgacgtggcctcagactacaagaagaagaaacat
gtcttcaaactcagagtgaacgatggaaatgagtttctgtttcaagccaaagatgaggag
gagatgagcacctggatccaggccatcctgaacaccagcgctgccgaccgcagcgacgtt
caaggcagcctgcccggcacaccggcgtctggacgagctcacacgctgccggccgccgtc
acactcaccactgagtcgagtcccggaaagagagagaaggacaaggaaaaggagaaagag
aaacgtttcagtctgttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
