Hippoglossus hippoglossus (Atlantic halibut): 117763607
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Entry
117763607 CDS
T07778
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117763607
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117763607
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
117763607
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
117763607
NCBI-ProteinID:
XP_034444761
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Position
6:18080160..18214417
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AA seq
884 aa
AA seq
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MASQRKSDTDHRGAGVCQRGCGLPLPAEDALKAEHCCVEALRTVTDALEERSAAVEHGAR
MSRLRWNRREQLLLAQVCRLQNQAQLAALQYQRRLHQYMVHINSIAQQMVGHCKSDVETA
ADTQGHRSEESTRAEPQEQVEEPEVNGKELSKSNHEETLEAFCGAKEPVVVQVIRRTPSG
RPHGPLQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQEF
YEGTDYLSPIPADGERTEEFEYEEVELYRLNSQEKLGLTLCYRTDEEEDVAIYVSEICPN
SIAARDGRIREGDRILQINGQDVQDREEAMAALSNDECRNIVLLVARPEMQLEEAWLDDE
HSEFLEQLKMEMLEEQQREEVELAALQEEQENEQRVEDDKPTCSTLPHHKSSVLSIKDRM
ESSEHNVLAQIQRRLSQCLRDNRDTHCTIGSTRLEDKDDEDDGEMEGDRFQQLLELKCQI
RNSGEYDLFYSRRSTIECSVGEQGGVQHELRLLNEELRSIELECQNIMQAHKLRKGQLSP
STGQSAPSIKNQSLHHGEPTKGKLTDIHERLEKSDKDSSSAYNTAESSRSTPLAMDRSPE
HSLQRMVSLTNQRNLCSSLASAHSLSSSPIPVCRAPVQGISSSPDHSNPSESEHTPQAEE
EGKGTLKTNACQIPYFSPSHSSQQRQTNIPAHARHYQSYMQLIQQRSAVEYAQSQLSLLS
VCKEPQRPINEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAM
SEMKMGRYWSKEERKQHLVRAKEQRERREFMQRSRLESLKENPQSSSEGRKEVSIIELSH
KKMMKKRNKKILDNWMTIQELMTHGTKAPEGAKVHNAFLSVTTV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacagaggaagtcggacacggatcaccgcggtgcgggtgtttgccagcgggga
tgcgggctccctctgcccgccgaggacgccctcaaagcggagcactgctgcgtggaggcg
ctccgcacggtcaccgacgcgctggaggagaggagcgccgctgtggagcacggagcccgg
atgtcgaggctcaggtggaacaggagggagcagctcctgctggcccaggtgtgcaggctc
cagaaccaggctcagctcgctgctctccagtaccagcgcaggctgcaccagtacatggtg
cacatcaacagcatcgcgcagcagatggttggacactgcaagagtgatgtggagacagct
gctgacacgcagggccaccgatcagaggaatccacacgtgcagagccacaggagcaggtc
gaggagcctgaggtgaatggaaaggagctgtccaagtccaatcatgaggagaccttggag
gccttctgtggtgccaaggagcccgtcgtggtgcaggtcatcaggcggacccccagcggc
cgaccccacggcccccttcaggaaatccatgtggtggacgtgtgcactcagaccgacatc
acctttgaacacatcatggcgctggcaaagctgcggccttcgacccctcctgtgcctgac
gtctgtcccttcctgctctctgacagctgtcactctctccatacaatggatcaggaattc
tatgaagggacagactacctctcccctattcctgctgatggagagaggacagaggagttt
gaatacgaggaagtggaattgtatcgactcaacagccaagagaagctggggttgactctg
tgctacaggacggacgaagaggaagatgtcgctatctatgtcagtgagatctgtccaaac
agcatcgctgccagagacggacgcatccgagagggggatcgcattttgcagattaatggc
caggatgtacaagaccgagaagaagcaatggctgcactctccaatgacgagtgtcggaac
atcgtgctgctggttgccagacctgagatgcagctggaggaggcctggctggatgatgag
cacagcgagttcctggagcagctgaagatggaaatgctggaggagcagcagagagaggag
gtggaattagctgccttacaggaggagcaggagaatgaacagagagtagaagatgataag
cccacctgttcaacacttcctcatcacaagagcagcgtactgagtataaaggacagaatg
gaaagctcggagcataatgtcctggctcagatccagagacgtctgtcccagtgcctgaga
gacaaccgggacacacactgtaccatcggctccacgcggctagaggacaaagacgacgag
gacgatggtgagatggagggtgatcgattccaacagctgttggagcttaagtgtcagatc
cgtaacagcggtgagtacgacctgttctacagccgccgcagcaccatcgagtgcagcgtg
ggggagcagggcggcgtacagcacgagctgcgtttgctcaacgaggagctgcgcagcatc
gaacttgaatgtcagaacatcatgcaggcccacaagcttcgtaagggacagctgtctccc
tcaacgggccaatctgcaccctccatcaaaaaccaaagcctccaccacggcgagcccaca
aagggtaagctgacagacattcatgagaggctggagaaatcggacaaggacagctccagt
gcctataacacagcggagagctcacgcagtacccctctggcgatggaccgctccccagag
cattcgctccagaggatggttagtctcaccaaccagaggaacctctgcagcagccttgcc
tctgcccactctcttagctccagccccatccccgtgtgccgtgctcctgtccaaggcata
agcagcagccccgaccacagcaatccatctgagtcggagcatactcctcaggctgaggag
gagggcaaagggacactaaagacaaatgcttgccagattccttacttctctccatcccac
agttcccagcagaggcagaccaacatcccagctcatgcccgccattaccagagctacatg
cagctgatccagcagcgctcagctgtggaatatgctcagagccagctcagcctgctcagt
gtgtgcaaagagcctcagcggcccattaatgagcccaagatggagtggaaggtcaagatc
cgcagtgatggaacccgctacatcactaagaggccggtgagagacaagatcctgagggag
cgagcgctgaagattaaagaggagcgtagcggcgggatgactacagatgacgatgcaatg
agtgaaatgaagatgggaaggtactggagtaaagaggaaaggaagcagcacctggtcagg
gcaaaagaacagagagaaagacgggagttcatgcagcgtagtcgactggaaagcttgaag
gaaaatcctcagagcagcagcgagggtcgcaaggaagtcagcatcatagagctcagccac
aagaagatgatgaagaaacgcaacaagaagatccttgacaactggatgaccatccaggag
ctgatgactcatggcactaaggcccctgagggagccaaggtgcacaatgccttcctatca
gtcactactgtataa
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